Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ANAC58                                                          <---------ANAC58                                                 --------->ZAT2                              <---------ANAC58   <---------At4g35610             --------->TOE2(3) <-  --------->ATHB12            <---------ANAC58   ----------->RAV1(2)           <---------YAB1      -- ------->ANAC46    ---------->ID1                <---------ZAT2   ------>ZmHOX2a(1)            ------ ------HVH21    ------>ZmHOX2a(1)                --------->At4g35610       <----------DOF2    ------- ----DOF2<----------DOF2   <----------DOF2<----------DOF2--------->ZAT2    <---------DAG2     <------   cacatcataggctttgtccttggccttctctttcgtctcataggctttatcagctgctctgcttgctccttcattcactttattcttagtttgttcagca  17865900                                                                                              <------                                                                                            <--------                                                                                          -----------     <---------ANAC58                                                                --------->ARR14(2)     <---------ANAC58                                <---------ANAC58             <---------ANAC58 --------ARR11(3)                      <---------At4g35610          <----------DOF2  <---------ARR14(2) ------->GLK1(2)                       --------->At4g35610<---------ZAT18         <---------ANAC46 --->YAB1          <---------CCA1(2)------>ZmHOX2a(1)<---------ANAC58   ----------->RAV1(2) ------>ZmHOX2a(1) -->At4g35610    --------->YAB1  ---------->ID1<----------DOF2      <---------DAG2<---------ANAC58 ---At4g35610 <----------DOF2<----------DOF2 ------>ZmHOX2a(1)<----------DOF2 <---------At4g35610   taatctttcgttctctctttcatatcgtaagctttgtccttagcttcctcttttgtcttgtgggctttccctttacctgcttctgcgtattctcctgatt  17866000                                                                          --------->LBD16      ------                                                                  <---------ARR11(1)           <-----                                                                  <---------ARR11(3)          <------                              <---------DEAR3(1)                  --------->ARR11(3)        ---------                             --------->RAP2.6(3)                  <-----------ARR10    --------->MYB46(3)                           --------->O2                           <---------ARR14(2)  -------->P                           <---------O2                           --------->ARR14(2) ------->GAMYB                           =================================bZIP_DOF     --------->LBD16--------->ATHB12 ---GLK1(2)         --------->At4g35610                       <------ZmHOX2a(2)     <---------MYB111(2) -YAB1            --------->YAB1<------NtERF2    <----------DOF2 <---------CCA1(2)  --------->MYB46(3) >RAV1(2)  <-----------GT1 --------->TGA1a       <---------DAG2--------->YAB1       <---------MYB55(2)   cttctctccattttttcgaatcatatgccaagtcggccctcgagtctctcgctttctctactggatcatatcttccctgaaaatcaacaaccattgatat  17866100                                                                        --------->ARR11(3)          - <---------REM1(2)                                               ----------->GT1                   <- --------->ZAT14                                        ---------->DOF2 --------->GLK1(2)     ------- --->ARR11(3)                                         <---------MYB52(1)<---------ARR11(3)   <------- ----ARR11(3)    ------>MYB46(1)           <-----------HVH21   <---------ANAC46             --------- ---GLK1(1)      ------>MYB83       <-----------GT1   --------->DOF5.7(2)                   <-------- >YAB1         <---------MYB59 <---------AHL20(2)   ----------->GT1    --------->RVE1(1)   --------->YAB1   ctcttcacacatattgacctaataccagcttattgaattaacaagtgtcacaaaccgttaaagagtcttgtaaaaatcttatatcaaaaacaaatatcat  17866200                                                            <-----------GT1                                                   *TSS--------->TOE2(3)                                                   <---------MYB52(1)                           -----    --------->YAB1                                 --------->DOF5.7(2)                          -----  <---------WOX13(1)                             --------->ANAC58                               ----- -------->ATHB12                                 --------->ANAC58                        <---------ICU4 --------YAB1                                    --------->ANAC55(1)                     --------->YAB1 -->YAB1                              <---------ANAC58--------->At4g35610         ------>MYB46(1)---- --YAB1<---------ICU4   <---------GLK1(2)        --------->ANAC46 <------------CBF------>MYB83  ----- >ARR11(3)             <---------At4g35610       <---------ANAC55(2)              --------->AtLEC2 -ARR11(3)     ---------->DOF2        <---------ANAC58<---------At4g35610    <-----------GT1   <-----   actcattgatcatttttcaaagttcagattccacttgatttcttgtcaaacacgttagcttaataccatattgctaaattcaccatccaaattatcacac  17866300                                                                       --------->ANAC46                                                                    --------->ARR14(2)                                                            ========================================bZIP_DOF                                                            --------->O2                                                            --------->bZIP60(2)                                                            --------->ANAC46                                                            --------->TGA1a                                                          <---------ALFIN1                                                        ------>ZmHOX2a(2)                                                      --------->ARR11(3)                                                      --------->ARR14(2)                                                      <---------ARR14(2) ---->ANAC46               <-------TEIL           ====================bZIP_DOF ---->ANAC58              --------->CCA1(2)    --------->YAB1<-----------HVH21                     <- ---->ANAC55(1)   <---------YAB1       <---------YAB1 <---------ARR11(3)                           -- ------->GT1      ----------->TBP    <---------AHL20(2)<------ZmHOX2a(2) --------->ANAC46          <- ---->ANAC58    --------->YAB1   <----------DOF2  ---------->DOF2   <---------ARR14(2)         ------ ----LBD16     <---------YAB1    =====================================bZIP_DOF           <----------DOF2   ggaaaaaaactccacatattataaatagatacaaactttttatttttaaaaataaagatcccacttcacatatacacaaaacaatttccttcttttttta  17866400        <---------AHL20(2)        --------->AHL20(1)        --------->AHL20(2)    <---------AHL20(2)                                           --------->YAB1   <---------AHL20(2)                                          --------->ANAC58   --------->AHL20(2)          --------->ATHB12            --------->ANAC58  <---------ARR14(2) --------AHL20(2)             <------ZmHOX2a(2)            --------->ANAC46  --------->ARR14(2) ------->AHL20(2)            --------->ARR11(3)            --------->ANAC58  <---------MYB52(1) ----- --------YAB1                <---------ARR11(3)   <---------AHL20(2)    --------->MYB52(1)     ------ --->AHL20(2)          --------->ARR11(3)      ----------->GT1 --------->ANAC58       --------->WOX13(1)   tataattaaataaaatagttttgaatatcaagatcatttgtgaatcaactagttaatttacacacaagcataaaaaccggttatgcatcaatctgtattg  17866500                                                         <---------DAG2                                                         <----------DOF2                           <-                                                  ==================bZIP_DOF                      <--                               --------->TOE1(2)  --------->ANAC58                               ----                --------->TOE1(3)          ---------->DOF2                                   <-------                --------->TOE2(3)    --------->AtLEC2 <---------ARR11(3)                     <-------             <-----------GT1   =============================MYC_MYB                       <------ZmHOX2a(1)         <---------AHL20(2)    ------->GAMYB      --------->ANAC58                        ===========        <---------AHL20(2)     --------->TOE2(2)  --------->O2               --------->LBD16---------     --------->AHL20(2)        --------->DEAR3(1) <---------O2<---------ETT(1)         <---------HSFC1(1)     <---------ARR11(3)       --------->MYB46(3)  <---------TGA1a    <---------ATHB12  --------->HSFB2a(2)     --------->AHL20(1)       --------->DEAR3(2)  --------->TGA1a   ------>MYB46(1)    <---------HSFB2a(2) ---->YAB1<---------ICU4----------->GT1    =================bZIP_DOF------>MYB83       --------->HSFC1(1) --->ICU4--------->AHL20(2) --------->MYB52(1)  --------->CCA1(2) --------->AtMYB61    >>>>>>>ZML2<--   atgaccatatattaattaccttagaatggttaaccgacgatgcaaaaaagacacgagagcttttccgaccaatcgctaccgcaagagttctaggagcttg  17866600                                                        <------NtERF2                        --------->LBD16                ------>NtERF2                       --------->LBD16                 <---------RAP2.6(3)                      --------->HSFB2a(2)             >>>>>>>>>AtERF-3                     ------>ZmHOX2a(2)                >>>>>>>>>AtERF-2                    <------ZmHOX2a(2)                 --------->RAP2.3(3)                   --------->ARR11(3)                 --------->RAP2.3(2)                   <---------ARR14(3)                 --------->DEAR3(1)                   <---------ARR14(2)                 >>>>>>>>>AtERF-1                   --------->ARR14(3)                 >>>>>>>>>AtERF-4                   <---------ARR11(3)                 >>>>>>>>>AtERF-5        --------->GLK1(1)                             --------->ANAC46 ---------DOF2    <---------GLK1(1)                   --------->RAP2.6(2) -------ANAC58  <---------HSFB2a(2)                  --------->ERF1                               <<< ------------->AGL1--------->ARR14(2)                --------->RAP2.3(1)                       <<<<<< --ANAC58--------->ANAC58                          --------->ARR14(2) --------->YAB1        <<<<<<<<<TBF1 --ANAC58--------->ANAC58                          <---------ARR14(2)<---------ATHB12    <<<<<<<<<TBF1 ==========================HOX2a_HOX2a     <---------DOF5.7(2)     --------->WOX13(1) <<<<<<<<<TBF1 >ZAT2 ---------->DOF2<---------HSFB2a(2)<---------MYB52(1)      <---------ATHB12   <---------------- -------ANAC58  --------->HSFB2a(2)      --------->DOF5.7(2)   --------->WOX13(1) <---------ARR11(3)   gcttttagggaaagccttcgagatcccgaagaaaaccgttctcgttaactgcatagccgccatattaatcaatcacaaaaacaatttcttcttcttcttc  17866700                                                              <---------ANAC58                                                              <---------ANAC58              ---------      <----------DOF2                              <---------MYB52(1)                       ---------      --------------->AGL15                       --------->LBD16                           ---------    <---------At4g35610                          <---------ANAC55(2)                    <---------HSFB2a(2)    --------->At4g35610                          --------->ANAC55(2)             <---------ZAT18 <---------At4g35610    <---------ARR11(3)      ------>ZmHOX2a(2)               <---------ANAC58 <<<<<<TBF1             --------->ARR11(3)     <------ZmHOX2a(2)                <---------ANAC58 <<<TBF1                --------->GLK1(2)     <---------ARR14(2)           <-----------RAV1(1) --------ANAC81 <----------DOF2               --------->ARR14(2)      <---------ARR11(3)--------->HSFB2a(2)   ttcttctgcttaatttagctttacaaaatctagttttctgaagttttggatccgtaatctctcggcttgcattatctatgttgcgaacttatagaagcca  17866800  Previous    Next  AGI:  At5g44310.1    Description:  late embryogenesis abundant domain-containing protein / LEA domain-containing protein. similar to late embryogenesis abundant domain-containing protein / LEA domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66421.1); contains domain PTHR23241:SF11 (PTHR23241:SF11); contains domain PTHR23241 (PTHR23241); contains domain PD454109 (PD454109) Range:  from: 17865100    to: 17866251    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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