Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------LBD16                                                                  <---------At4g35610                                                                  --------->At4g35610                                                              <-----------HVH21                                                             --------->bZIP60(1)                                                       --------->GLK1(2)                                                       <------ZmHOX2a(2)                                                      --------->ARR14(2)                                                      <---------ARR11(3)                                                      <---------GLK1(2)                                                      --------->ARR14(3)                                                      --------->ARR11(3)                                                      --------->AGP1--------->LBD16                                           <---------DAG2    <---------bZIP60(1)                                        <---------ALFIN1------>ZmHOX2a(2)      --------->ARR14(2)                                  --------->ANAC46    <---------ARR14(3)       <---------ARR14(2)              --------->LBD16     <---------ALFIN1    <---------ARR14(2)     --------->LBD16             <---------ANAC46   <---------ALFIN1    ----------->ARR10   --------->ATERF1(1)            <---------LBD16   ================================HOX2a_HOX2a<---------ARR14(2)           --------->MYB52(1) =================================HOX2a_HOX2a  --------->RAP2.6(2)     <        <---------ANAC58      ------>ZmHOX2a(1)<---------ETT(1)----------->HVH21                   <-        <---------ANAC58  --------->ANAC46 <----------DOF2------>ZmHOX2a(1)<---------LBD16         --   tggtcacattacttgccggatgaaatacactcctccacacatccactttccgaccagatcctggtgtcaccggagtagccggactcgctggaagagatac  17863000         ----------->HVH21                                         --------->AHL20(2)       <---------At4g35610                                         <---------AHL20(2)       --------->At4g35610                                     <---------AHL20(2)    ------>NtERF2                       --------->ZAT6        <---------AHL20(1)   --------->LBD16                      <---------ALFIN1      --------->ARR11(3) ------>ZmHOX2a(2)                    <-----------GT1         <---------ARR11(3) ------ZmHOX2a(2)                  --------->ANAC55(2)      ------->TEIL           --------->YAB1 <-- --------ARR14(2)            <---------ALFIN1            ----------->GT1    ----------->HVH21   ----- ------->ARR14(2)            ----------->RAV1(1)      <------ZmHOX2a(1)   --------->CCA1(2)  <-------   cgatccggccactgacattccttctaaacccccacatatgtaacactccgattagaggaatgtatatatttaaatgatatgacaattagaacaatatgat  17863100           <-----------GT1       -------->ATHB1       <---------ICU4       -------->HAHB4       --------->ATHB12       --------->ATHB51      --------->ICU4      <---------ATHB51      <---------YAB1                                                                        ---------   <---------AHL20(2)                                                                --------->AHL20(2)   --------->AHL20(2)                                                    ----------->GT1   <---------YAB1  --------->AHL20(2)                                                    --------->DAG2    --------->ARR11(3) -------YAB1                                                    ----------->GT1      <---------AHL20(2) ---->CCA1(2)                                     ----------->GT1      ---------->DOF2    <---------ARR11(3) --YAB1<---------AHL20(2)  <-----------GT1   <----------DOF2<---------YAB1    ---------->DOF2   atgatttaattattgactgtttcaaaatttcaccatggtaacccattcttttgggtaaatttctaattgttaaaaaagttaaaagaaataaatatcatca  17863200                                                         <---------ANAC58                                                         <---------ANAC58--------->AHL20(1)                                                        <---------ICU4   --------->ARR11(3)         -                                                  <---------At4g35610    <---------AHL20(2)         -                                                <---------LBD16    <---------ANAC58 <---------At4g35610                                   <----------DOF2--------->LBD16  <---------ANAC58 ----------->RAV1(2)               --------->ATHB12   --------->TOE2(3)    --------->ICU4    <---------AHL20(1)         - >YAB1   --------->YAB1      <---------ICU4   <-----------GT1<---------YAB1    XXXXXXXXXXXXXXXXXXXX>MIR869.1   actatattcaagaagaattagtggaacaaaattattcctttattcatttttccgctaatgcttactattgcttaatattttggttcacctgtggtattgt  17863300                                             --------->DEAR3(1)                          <---------DEAR3(1) --------->DREB2C(2)                      <-------TEIL          --------->ATERF1(1)               <---------ANAC46             <------NtERF2          --------->RAP2.6(2)            --------->ALFIN1<------NtERF2  <---------ATERF1(1)   ------>MYB83                     ---          <---------ZAT2<-----------HVH21  --------->MYB52(1)    ------>MYB46(1)                  ---          <---------At4g35610              ------>NtERF2        --------->ANAC58                  --- <---------STY1(2)  <---------GLK1(2)     <---------ALFIN1      --------->ANAC46               ------ --------->STY1(2)  <---------ARR14(2)  <-----------HVH21       --------->ANAC58               <----- -------->ANAC46    --------->ARR14(2)--------->ANAC58         --------->MYB46(3)              ------ -------->ANAC58   <---------GLK1(1)  --------->ANAC58<-----------HVH21     <---------SPL7     <----- -------->ANAC58  ----------->ARR10  --------->ATERF1(1)    <------ZmHOX2a(1)              <---------   tcaagctagttaagctggtggagattcgtcggagatggccacggccaccggcttcgggtcgaggaccagccacaacgtcgtcccaaaggttttcaagtac  17863400                          ------>ZmHOX2a(2)                          ==========================HOX2a_HOX2a                         <------ZmHOX2a(2)                        --------->ARR14(2)                   --------->ATHB12                        <---------ARR14(2)                  <---------YAB1                        <---------ARR11(3)                  --------->ICU4                        --------->ARR11(3)               <<<<<<<GRF7                        <-----------ARR10              ----------->HVH21                        --------->ARR14(3)           <---------ANAC55(2)    <---------AHL20(2)  <---------ARR14(3)           ----------->RAV1(2) ------>ANAC58          *TSS                         --------->ANAC55(2) ------>ANAC46          --------->AGP1              --------->MYB52(1)                              < ------>ANAC58      ---------->DOF2                <-----------GT1                        --------->LBD16 --->ZAT18     <---------ANAC46                --------->AHL20(2)                       <---------LBD16 ----ZAT18     <---------ANAC58                ----------->TBP                          <------------ --->ZAT14<----------DOF2===========================HOX2a_HOX2a            --------->ATHB12      <--- --TEIL<-----------GT1----------->ARR10      ==========================HOX2a_HOX2a      ------------- ------AtSPL8  <---------ANAC58              ------>ZmHOX2a(1)  ------>ZmHOX2a(2)   <---------MYB46(3)   acccatttttttcttttgcttagaaagatcttcgtttcatgtctctcctataaatacctgacatgatcggtttagtttgatttgagttgttccggtttag  17863500        --------->ZAT2        --------->At4g35610        <---------ZAT2        <---------At4g35610 --------->GLK1(2) ------------CBF                <---------ANAC58 -----AGL1                      <---------ANAC58--------->AHL20(2) ---ZmHOX2a(1)        ------------>CBF ------>ZmHOX2a(1) ---->AGL1           ----------->RAV1(1)   <------ZmHOX2a(1)           --------->YAB1   gagattgtggagctggtctcttgcaacaatttgtccgtgtccttaggagataaatttgaagttttcaagactttcaaaatacagacatatttgttttttg  17863600                                       ------>ZmHOX2a(1)                                 --------->HSFB2a(1)                             <---------ANAC58              <---------At4g35610                             <---------ANAC58              --------->At4g35610                             <---------ANAC46  --------->ANAC46   --------->ANAC58                <-----------GT1 <---------TOE2(2)    <---------DAG2                --------->YAB1  <---------TOE1(2)    <----------DOF2   <---------ANAC58   <---------ARR11(3)     <-----------GT1      --------->ANAC58          <------ZmHOX2a(1)   <---------ANAC58   --------->ARR11(3) <----------DOF2 <-----------GT1       ----------->GT1   ggttttcttgtgtcttaatcacaatatcatgtcgtatgttcctcttttcactcgactttttagctctcaagcttcttaaaccagataaaacagaggaaac  17863700                                       <---------ANAC58                                       <---------ANAC58                                          ----                                       <---------ANAC46         <-----------HVH21                <---      <---------HSFB2a(2)          <---------ANAC58            ------->GAMYB                    <----      --------->HSFB2a(2)          <---------ANAC58         <-----------GT1      <---------MYB52(1)<-    <-----------GT1            <----------DOF2             <-----------GT1 <----------DOF2    -------   agagttttacagaagcgatagcacttgaaggctctttacttgggtatgaagaaaacagtttttaactgtcaaatattctttctgttttgttttcttcaat  17863800                                                              =====================================HOX2a_HOX2a                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)                                                            <---------AGP1                                                            <---------ARR11(3)                                                            --------->ARR11(3)       --------->AHL20(2)                                   --------->AGP1 ----->YAB1                                        ================================================== ------ICU4                                        --------------->AGL15                    <------ZmHOX2a(1) -----ATHB12                           --------->YAB1<----------DOF2               <---------REM1(1) --------YAB1                 <----------DOF2      <---------------AGL15  --------->HSFB2a(2) -->WOX13(1)     <---------ATHB12   --------->WOX13(1)  ---------->DOF2   <---------HSFB2a(2)      --   catggttcttaaaatacgaatcaagcttcagactttgacaatcacatggttttctctttaaagatctatttcaaatctagaagagatgtagcaaggacat  17863900  Previous    Next  AGI:  At5g44300.1    Description:  dormancy/auxin associated family protein. similar to dormancy/auxin associated family protein [Arabidopsis thaliana] (TAIR:AT2G33830.2); similar to putative auxin-repressed/dormancy-associated protein [Citrus cv. Shiranuhi] (GB:ABL67651.1); contains InterPro domain Dormancyauxin associated (InterPro:IPR008406) Range:  from: 17862393    to: 17863424    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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