Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->DEAR3(1)                          ------>NtERF2                         ------->GAMYB                         --------->DEAR3(1)                        <---------MYB55(2)                        --------->MYB46(3)                        --------->DEAR3(2)                       ------>MYB46(1)                       --------->SPL7                          ------->MYC2 ------->TEIL          -------->P                              <-------MYC2 -------YAB1           ------>MYB83<-------GAMYB               <-------MYC3            <----------DOF2 -----ICU4        <---------ARR14(2)                <---------GLK1(1)   <---------ANAC58 ---->YAB1        --------->ARR14(2)<---------MYB52(1)         ------->MYC3 ----------->GT1         < ----ATHB12 <------ZmHOX2a(1)------>NtERF2          --------->GLK1(1)   <---------ANAC58    <-------- >TEIL---------->DOF2 ------>ZmHOX2a(1)           <------ZmHOX2a(1)     <---------AtLEC2    <--------   atgaatgttaaagaggacaggttcctaccgccgagtctgttagatttgtgtaggaaatcgtagcacatggtcttgcatgggttatatagcttttgcttaa  17827300                                                                  ----------->GT1                                                                ------->MYC3                                                        --------->TOE2(3)                                                        --------->TOE1(3)       <------ZmHOX2a(1)                              --------->ARR11(3)                  --------->ZAT14     <---------TOE2(3)                                <---------ARR11(3)           <---------------AtSPL3     <---------TOE1(3)                               <---------CCA1(2)             <---------------AtSPL8 -----------RAV1(1)                                --------->AHL20(2)         <<<<<<<<<RAP2.2 -ANAC58<---------ARR14(2)--------->ICU4 --------->YAB1 --------->YAB1<---------AHL20(2)  <---------ZAT14 -ANAC58--------->ARR14(2)<---------ATHB51       <----------DOF2<-------MYC3 <---------TOE2(3)     --   atctgttgaggatttgatgaagttagaaattatggacaaactataatgagactttaaatcttaacacatggtttaattttagattgaagtactgaactat  17827400                       <---------MYB46(3)                     <-------GAMYB                                         <------ZmHOX2a(1)                   <---------TOE1(3)    <---------GLK1(1)                  ==============HOX2a_HOX2a            --------->DOF5.7(2)         --------->GLK1(1)             ------>ZmHOX2a(2)            <---------MYB52(1)         <---------ARR11(3)         <---------MYB46(3)           --------->TOE1(3)           --------->ARR11(3)      <---------bZIP60(2)<------ZmHOX2a(2)           --------->TOE2(3)   --------->DAG2                  <---------ANAC46  --------->ARR11(3)          ----------->GT1<---------ANAC46       --------->RAP2.6(3) --------->ARR14(2)         <---------TOE2(3)    ---------->DOF2  --------->MYB52(1)--------->ALFIN1<---------ARR11(3)     --------->TOE2(3)<--------P      <------ZmHOX2a(1)       <---------AtMYB61----------->ARR10    - --------->GT1     <---------TOE2(3)<---------TOE2(3)<----------DOF2<---------ARR14(2)    ---------->DOF2   atggtaacataaacgttaattagggttgtttgaaaagtaaggatatcaaaaacggctttaagatgaggtggatcggaggagaagatcagaacaaaagaga  17827500            --------->At4g35610            <---------At4g35610        --------->ALFIN1                                                       <---------ICU4        <---------DEAR3(1)                                                   ------------>CBF        <---------AtMYB61                                                 <---------MYB59     --------->ALFIN1------>ZmHOX2a(1)       <-----------TBP        <-------MYC3 --------->DOF2  --------->ARR14(2)---------->DOF2                  ------->MYC3        ------>NtERF2   atgaaaggaggtggtgctgaatcctattctaaaaaacaaaagtttggatttgtagcaaagtttgaatacacatgggcctaacaattacgaggcccaaaac  17827600                                  <---------AHL20(2)                                 <---------AHL20(1)                                 <---------AHL20(2)                        <-------GAMYB                       <---------ANAC58                       <---------ANAC46                  --------->MYB52(2)          ---------->DOF2        --------->AHL20(2)                                             -----       ----------->RAV1(1) --------->YAB1                                                       -----      --------->ANAC46 <---------ANAC58             --------->GLK1(2)                <-----------GT1    --------->ANAC46<---------MYB52(1)     <------------CBF            --------->At4g35610<----------DOF2   aaaaatccacaacaaagagttcgtttcgttgataatttttttgtttattgtcagactctgaaacgtttgagaacgctgaacttgttttctctctttctac  17827700                                                                 <------NtERF2                                                                ------>NtERF2                                                                <---------RAP2.6(3)                                                               --------->ANAC58                                                               >>>>>>>>>AtERF-7                                                               >>>>>>>>>AtERF-1                                                               >>>>>>>>>AtERF-3                                                               >>>>>>>>>AtERF-4                                                               >>>>>>>>>AtERF-5                                                               --------->RAP2.3(2)                                                               --------->RAP2.6(2)                                                               --------->ANAC46                                                               --------->RRTF1(3)                                                               --------->ANAC58                                                               --------->RRTF1(2)                                                               --------->DREB2C(2)                                                               --------->DEAR3(1)                                                               >>>>>>>>>AtERF-2                                                               --------->ATERF1(2)                                                               --------->RAP2.3(3)                                                              --------->ERF1                                                              --------->DEAR3(2)                                                              --------->MYB46(3)                                                              --------->RAP2.3(1)                                                              --------->RRTF1(1)                                                              --------->ATERF1(1)    ---------->DOF2                                    ------>ZmHOX2a(2) --------->AtLEC2                                    --------->ARR11(3) --------->ANAC58                                    --------->ARR14(2)                     <-------- --------->ANAC58              --------->REM1(1)     <---------ARR11(3)                     <-------- ---->ANAC46              ----------->GT1            <---------ARR14(2)<---------GLK1(2)    <-------- ---->REM1(1)       ----------->HVH21       --------->REM1(1)<---------ATERF1(1)--------->ZAT6      -   accatgcaaagacagagagcaaatgacactgttacaacatttcgctacaatactcgatcttcgagccgccatggaatctctaacactctcagagtcgtgg  17827800                         <---------ZAT6                                         ------>ZmHOX2a(2)                      <---------STY1(1)                                        <------ZmHOX2a(2)                      --------->STY1(1)                                        --------->CCA1(2)                <-----------TGA1                                <------ZmHOX2a(1) --------->At4g35610                <-----------HVH21                               =======================HOX2a_HOX2a               <---------bZIP60(1)                              ======================HOX2a_HOX2a               --------->O2                                 --------->LBD16   <---------ARR14(2)               --------->bZIP60(1)                     ----------->HVH21      --------->AGP1 --------               --------->bZIP60(2)                     --------->WRKY38(1)    <---------AGP1 <-------              <------NtERF2                            --------->WRKY12       --------->ARR14(2)             <---------ATERF1(1)                     --------->At4g35610      <---------ARR11(3)             ------>NtERF2                    <---------HSFB2a(1)             <-----------ARR10------ -ANAC46    --------->DEAR3(1)                --------->HSFB2a(1) --------->At4g35610        ------->TEIL -ANAC58    <---------DEAR3(1)          <------ZmHOX2a(1) <---------LBD16     --------->ARR11(3)    - -ANAC58 <---------DEAR3(1)    <------ZmHOX2a(1)     <---------At4g35610     <---------CCA1(2)<------ -------->YAB1--------->ATERF1(1)  --------->ALFIN1<-----------RAV1(2)      ----------->ARR10<-------   aatcaaaaacatcggcgtcgtcacctagggttaggagatggaggaagaaggtttcagatgaccggaggagcacaaactcagatctgcttccgatggatct  17827900                                                                                           ==========                                                                                           ------>ZmHOX2a(2)                                                                                         <---------ARR11(3)                                                                                         <---------ARR14(3)                                                                                         --------->ARR14(3)                                                                                   --------->ZAT2                                                                                   <---------ZAT2                                                                                   <---------At4g35610                                                                                   --------->At4g35610          --------->TOE2(3)                                                        ------>NtERF2        --------->GLK1(2)                                                         --------->DEAR3(1)       <---------GLK1(2)                              <---------ARR14(2)         --------->ERF1     ----------->ARR10                                <-----------ARR10         --------->LBD16 --------->DAG2                                       --------->ARR14(2)        --------->At4g35610 ->ARR14(2)             --------->ANAC46           <---------ANAC58             <---------At4g35610 --ARR14(2)             --------->ORA47(1)         <---------ANAC58           <---------LBD16 >ZmHOX2a(2)          --------->DEAR3(2)       <---------At4g35610         --------->YAB1--------->ARR11(3) --------->DOF2      --------->MYB52(1)        ------>ZmHOX2a(1)          <---------ATHB12<------ZmHOX2a(2) ---At4g35610        -------->P            --------->ARR14(2)           --------->WOX13(1)=========== --AGP1<---------ARR14(2)                  <---------ARR14(2)--------->ARR11(3)--------->ANAC46   ---   gataaaggagattcttaaacgcttaccggccaaaaccctagcgaggttcctctgcgtatcgaagctctggtcatcaatcatccgcagccgagatctcatg  17828000                                                                    <---------ANAC58                                                                    <---------ANAC58                                                               --------->ATHB12                                                              <---------YAB1                                                            --------->YAB1                        <---------ETT(2)                 ---------->DOF2                           <-       ------>ZmHOX2a(1)----------->HVH21   <-----------GT1--------->ICU4                    ------>ZmHOX2a(1) =============HOX2a_HOX2a              <----------DOF2--------->ANAC58                   <---------ARR14(2) =============HOX2a_HOX2a      <-----------HVH21<-----------HVH21<---------WOX13(1)      --------->ARR14(2) ---->TEIL     --------->HSFB2a(1) <---------CCA1(2)  --------->ANAC58  <---------YAB1   --------->GLK1(2)   aaactgttcctcaccgagtcttccgctcgaccaggtcgtctctttttcaccttcagacgtaaagatgattgcttcttattctcgtctgaagaatcctctg  17828100                                      --------->ANAC58                                 <-------TEIL                                --------->CCA1(2)             <-----------GT1   <---------ARR14(2)         <----------DOF2       --------->ARR14(2)        <---------DAG2    --------->At4g35610                   --------->ATHB12      -------->P          <---------At4g35610                  ----------->ARR10     <-----------GT1     ------->TEIL --------->ANAC58 <---------REM1(2) --------At4g35610    ------>ZmHOX2a(1)           <----------DOF2                       <---------YAB1   tagctacttaccttttcacgattcctgcatctggatacacaaacaattgttcctttgttcacggtttgatttgctatggaactactgcttatgcttctca  17828200  Previous    Next  AGI:  At5g44220.1    Description:  F-box family protein. Identical to Putative F-box protein At5g44220 [Arabidopsis Thaliana] (GB:Q9FFG9); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G38870.1); similar to S haplotype-specific F-box protein, putative [Solanum demissum] (GB:ABI34316.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 17827704    to: 17828591    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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