Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------AHL20(2)                     ------->GAMYB      --------->AHL20(1)                  --------->MYB52(1)    <---------AHL20(1)                                 <---------              <---------GLK1(1)         <---------AHL20(2)                              --------->GLK1(2)              --------->GLK1(1)    --------->AHL20(2) -------->P                        --------->ARR11(3)   <---------------AGL15         ----------->GT1      ------->TEIL           <-----------GT1   --------------->AGL15<---------ARR11(3)     <---------ANAC58      ------->TEIL   --------->YAB1  --------->TOE2(3) --------->ANAC46    --------->AHL20(2)          <---------CCA1(2)   <---------ARR11(3) --MYB46(3) <------ZmHOX2a(1)  ---------->DOF2 <---------ANAC58 <---------ANAC46   <---------ATHB12   gatttcttaaaacaggaaatcaacgaaatctcccaaagtaaataaaattgtgtatcaacctgtatgccatgtatctaaataacaaatcaaaatcttttag  17823300                                                         <---------AHL20(2)                                                      <---------ICU4                                                     <---------YAB1                                                     --------->ICU4                                                   --------->YAB1                                                   -------->HAHB4                        <----------DOF2           <---------YAB1                             <-------               ----------->GT1                  --------->YAB1                               <-------               <----------ID1      <---------YAB1 --------->ICU4                 --------->AHL20(2)     <-------TEIL       <---------DAG2   <-----------HVH21                    --------->TOE2(3) -DOF2       ---------->DOF2<-----------GT1    <---------AHL20(2)          <---------GLK1(2) --------   caatagattcaaaaaaaaagaaaaaactttttgcaatatgatatgtcatataatgataattaagttgatacaaattggattcttaaaataaactggattc  17823400                  --------->AHL20(2)                  <---------AHL20(2)                                            ------>MYB46(1)    <---------At4g35610   <---------ARR11(3)                                    ------>MYB83    --------->At4g35610   --------->ARR11(3)------>MYB83                        -------->P --------->At4g35610      --------->AHL20(1)------>MYB46(1)                   <---------MYB111(1) <---------At4g35610  ---------->DOF2     <---------MYB46(2)         >>>>>>>>>RAP2.2 --GLK1(2)       --------->AHL20(2)       <---------MYB59          <---------ARR11(3) --ARR14(2)     <---------YAB1            <---------MYB111(1)     <---------CCA1(2) ->ARR14(2)  --------->AHL20(2)        <-----------GT1  <---------YAB1     <-----------GT1<---------AHL20(2)   ttaagctgctaaccatttattaaaaaaagatattgacacatttacctactcacatattatcaaaccatatatctaaatcacctactacatatttcattcg  17823500                --------->ARR11(3)                                                             ------                <---------ARR11(3)                                                             <-----               <---------CCA1(2)                                                               ------              <---------AHL20(1)                                                              -------              --------->AHL20(1)                                                              -------              <---------ARR11(3)                                                              -------              --------->ARR11(3)                                                              <------             --------->AHL20(2)                                                               -------  --------------->AtSPL8        --------->AHL20(2)                                           --------  <---------------AtSPL8        <---------AHL20(2)                                  --------->YAB1   aaacattgtacataaatatatctctatacaaaatttaaatgacaacattgtcaacatagaagtatagaaccgtggctattagctattcatattgggccga  17823600                                --------->ZAT18                               <------MYB46(1)<---------ANAC46 >NtERF2                       <------MYB83   <---------ANAC58 ----RAP2.6(3)                --------------->AtSPL8 ----->RAV1(1)                --------->MYB111(1)                                            -------- -->RAP2.3(3)                 <---------MYB46(3)                                           <---------ANAC58 -->DEAR3(1)                  --------->MYB55(2)                             <---------AHL20(2) -->RAP2.6(2)           <------------CBF   <---------TOE2(3)    ----------->GT1            <---------ANAC46 ---ETT(1)           --------->YAB1    --------->YAB1       <---------AHL20(2)             <---------ANAC58 -->DREB2C(2)--------->DAG2   <---------------AtSPL8   <-------TEIL         --------->AHL20(2) ->DEAR3(2)---------->DOF2   <---------ANAC46 <---------ANAC58 <---------TOE2(3)  --------->TOE2(3)*TSS   caaaaaaaaaaaaaaaaggctattcatattggtgggtactaaaataaggcttggaaattcatattaatgtaaaactcatttaatcgttagagagcgtggt  17823700                                                          <------NtERF2                                                         <------NtERF2                                                         --------->LBD16                                                         ------>NtERF2                                                        ----------->RAV1(1)                                                        --------->RAP2.3(2)                                                        --------->DEAR3(1)                                                     ===============================bZIP_DOF                                           --------->ANAC58                                           --------->ANAC55(2)                                           <---------ANAC55(2)                                           --------->ANAC58                                 --------->WOX13(1)  ===============================bZIP_DOF                              --------->ANAC46       --------->O2                              --------->ANAC58       <---------O2                      <------NtERF2                              --------->ANAC58       --------->ANAC46                 <---------RAP2.6(3)                           <------ZmHOX2a(2)         --------->ANAC58                 <-----------HVH21                          --------->ARR11(3)         --------->ANAC58                --------->ANAC46                         --------->At4g35610  =================bZIP_DOF              --------->RAP2.6(2)                    <---------ANAC46       --------->ANAC46   --------->MYB52(1) --------->DAG2                    <---------ANAC58--------->YAB1   --------->TGA1a      <---------TOE2(3)                    <---------ANAC58--------->AHL20(2) --------->RAP2.3(1)<---------TOE1(3)                 =================HOX2a_HOX2a ---------->DOF2----------->HVH21  ---------->DOF2                 <------ZmHOX2a(1) <---------ATHB12  <---------TGA1a     ---------->DOF2 ->ALFIN1  <---------TOE2(3) --------->WOX13(1)  <-----------HVH21     --------->DOF5.7(2)       ----   agtcatgtagattaatgaaggagcgtgagatcaagcaatcaaattacgcaaagtcacgccgcagtaacgggacgttaaggcaaaaagccgtcacaaaaac  17823800                                   <---------DAG2                                   <----------DOF2                                 ------>NtERF2                               <------NtERF2                               --------->DEAR4(2)                               --------->ATERF1(1)                               --------->RAP2.3(1)                              <---------RAP2.3(1)                              <---------ORA47(2)                              <---------DEAR4(2)                              <---------ERF1                              ------>NtERF2                              <---------RRTF1(1)                              <---------ATERF1(1)                              <---------RAP2.6(1)                             --------->ATERF1(2)                             <---------RRTF1(2)                             <---------RAP2.3(3)                             <---------RAP2.6(2)                             <---------ATERF1(2)                                                    <                             <---------RRTF1(3)             <---------CCA1(2)                       -                             <---------RAP2.3(2)       <---------WRKY18(1)                     <-----                             <---------DEAR3(1)       --------->WRKY38(1)                      ======                            <---------ABI4(1)         --------->WRKY12                         ------        ----------->HVH21   <---------ORA47(1)        ----------->HVH21                       -------  <-----------GT1    <----------DOF2                  --------->WRKY45<----------DOF2    <----------DOF2 ----->TOE2(3)      <---------MYB52(1)    --------->WRKY18(1)   <----------DOF2         <---------DAG2   attaaaacctctcacattgtctgttttttgggcggcgcttttcagtcaaaccctcgttgaccgtctctttctctttctctaaaccaaaaaccttttcctt  17823900                                                             --------->ANAC58                                                             --------->ANAC46                                                         --------->YAB1                                                      <----------DOF2                                                      --------------->AGL15                                                      <---------------AGL15                   <-----------TGA1           <---------ARR11(3)                       --------->At5g28300    --------->AHL20(2)                        --------->ARR11(3)                    --------->SPL7 ---------AHL20(2) <-----------HVH21         <---------CCA1(2)                     --------->MYB52(1) -------->AHL20(2)--------->bZIP60(2)       <---------AHL20(1)            --------->ANAC58 -----DOF2        --------->ANAC46          --------->ARR11(3)            --------->ANAC46 =====================================================================MADS_MADS   <---------SPL7    < --------->AGL15 <-----------STF1           <---------ARR11(3)            --------->ANAC58          < -->TOE2(3)     --------->MYB52(1)        --------->GLK1(2)  --------->ANAC58<-----------RAV1(2)    <   tataaattaaaccaaaaacaacgtcacttctctatctaaacgagaatatatctcttcttttataagcaatggctccaagacaggcgaacggtagaagcat  17824000               --------->ALFIN1               <---------DEAR3(1)               <---------ANAC46              --------->At4g35610              --------->ATERF1(1)              <---------At4g35610              <---------ABI4(1)              <---------LBD16              <------NtERF2             <---------ERF1             <---------ORA47(2)             ------>NtERF2             <---------ATERF1(1)             <---------RAP2.6(1)             <---------DEAR4(2)                                                                     -             <---------RRTF1(1)                                                                     <             <---------RAP2.3(1)                                                                    <            --------->ALFIN1                                                                       <-            <---------RRTF1(2)                                                                 <-----            <---------RAP2.3(3)                                                               -------            <---------DEAR3(1)                                                                -------            <---------RAP2.6(2)                                                              <-------            <---------RAP2.3(2)                                                              --------            <---------RRTF1(3)                                                             ----------            <---------DREB2C(2)                                                           <--------P-           --------->ATERF1(1)                                         --------->ALFIN1 ----------->GT1      ----------->HVH21                                  --------->ZAT18      <---------HSFB2a(1) <--  <---------MYB52(1)                                     <---------ZAT14      <---------HSFC1(2)  --- --------->LBD16                                         --------->ZAT14      --------->HSFC1(2)----- ---------ANAC46             ----------->TGA1  --------->LBD16       --------->ALFIN1   <---------ANAC46 ---------ANAC58 <------NtERF2               <---------LBD16 <----------DOF2  --------->HSFB2a(1)<--- ---------ANAC58<---------SPL7     ----------->TGA1      <---------ZAT18   <------ZmHOX2a(1) --------   tgccgtgagtgaaggcggcggagggaagacgatgacgatgacgacgatgcggaaggaagtgcactttagaggtgtgaggaagcgtccatggggtagatac  17824100          <-----------HVH21          --------->LBD16         <---------ANAC58         <---------ANAC58         <---------ANAC55(1)         <---------ANAC55(2)         --------->ANAC55(2)        <-------TEIL       <------ZmHOX2a(2)      --------->ARR11(3)      --------->ARR14(2)      <---------ARR14(2)      <---------ARR11(3)     <---------GLK1(1)     --------->GLK1(1)    ----------->ARR10                                             <---------ZAT2   <------NtERF2                                               <------ZmHOX2a(1)  --------->LBD16                                           <------NtERF2                 ------>NtERF2 <---------ANAC46                                         <---------DEAR3(1)             --------->DEAR3(1) <---------DEAR3(1)                                       <---------ANAC46               --------->RAP2.3(2) ----->NtERF2                                            <---------LBD16                --------->RAP2.3(1) ------NtERF2                                          --------->ANAC58                ------>NtERF2 ---------LBD16                                        --------->ANAC58                --------->ABI4(1) --------ATERF1(1)                                     --------->ANAC46               --------->DEAR3(1) --TEIL--------->CCA1(2)                               <---------DEAR3(1)           ------>NtERF2 -->CCA1(2)                                            <---------TGA1a              <---------ATERF1(1) -->ARR14(1)                                           --------->TGA1a             <---------ALFIN1 --ARR14(2)                                            --------->O2             --------->ANAC58 ->ARR14(2)                                            <---------O2             --------->ANAC46 ->ARR10------>ZmHOX2a(2)                            <---------ALFIN1          --------->SPL7 -------->ATERF1(1) =============================================bZIP_DOF  --------->At4g35610 -------DEAR3(1)    ---------->DOF2                 <---------REM1(2)     --------->ARR11(3) ------>ANAC46   --------->LBD16               --------->KAN4(2)  --------->ZAT2--------->ANAC58 ---->ANAC46    <---------LBD16   --------->ALFIN1----------->HVH21       <---------ARR11(3) ------LBD16   <---------LBD16 --------->LBD16<---------HSFB2a(1) <---------At4g35610 --------->ANAC46 ->ARR11(1)----------->HVH21 <---------LBD16  --------->HSFB2a(1) --------->At4g35610--------->DEAR3(2)   gcggcggagatccgtgacccgggaaagaaaacccgggtttggctcgggacattcgacacggcggaggaagctgcaagagcttacgacaccgccgctagag  17824200  Previous    Next  AGI:  At5g44210.1    Description:  ATERF-9/ATERF9/ERF9 (ERF domain protein 9); DNA binding / transcription factor/ transcription repressor. Identical to Ethylene-responsive transcription factor 9 (ERF9) [Arabidopsis Thaliana] (GB:Q9FE67); similar to ATERF10/ERF10 (ERF domain protein 10), DNA binding / transcription factor/ transcription repressor [Arabidopsis thaliana] (TAIR:AT1G03800.1); similar to ethylene-responsive element binding protein [Gossypium barbadense] (GB:ABU53677.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 17823699    to: 17824761    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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