Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------YAB1                                                         <---------YAB1                                                         --------->ICU4                                                       <--------HAHB4                                                       --------->YAB1                                                      <---------YAB1 -------ANAC55(1)             <-----------GT1 <---------RVE1(1) -------ANAC46             --------->AHL20(1) <---------CCA1(1) -------ANAC58             --------->ARR11(3)--------->ARR11(3)            ----------->GT1 -------ANAC58            --------->AHL20(2) <---------ARR11(3)           ------>ZmHOX2a(2) -YAB1         ------->TEIL<---------ARR11(3)<---------ARR14(2)    <----------DOF2              <----   tcgtgtgcatatatatgtattttctgaaatatataccatgttctgaagatatttgtattattattagttctttcgatctgaaaaattgacagcctcatac  17779300                                                       <---------ANAC58                                                       <---------ANAC58                                                       <---------TGA1a                                                       --------->TGA1a                                                  <---------CCA1(2)                                              <---------O2                                              <---------TGA1a                           ======================================bZIP_DOF                           ---------->DOF2    --------->ANAC55(2)                    <---------TOE2(3)         --------->O2       --------->CCA1(2)--------->CCA1(2)     <---------ANAC55(2)       <-----------GT1<------ZmHOX2a(1)   <-----------HVH21   ------->TEIL              --------->GLK1(2) -----YAB1    <-------TEIL =============================bZIP_DOF                   ----------->HVH21<   gattgcaatatacaagtccatgaaggatataaagaatatagacttgtcacttgtctctcgtgcgaacgtttattatctataacctctgacattctgcaaa  17779400                                                                                   --------->ARR11(3)                                                                                  <---------CCA1(2)                                     ----------->HVH21                           --------->AHL20(1)                      <---------ARR11(3)                                         <---------AHL20(1)                      --------->AHL20(1)                                   <-----------GT1                      <---------AHL20(1)                     ----------->GT1------------>CBF         --------->ANAC46          ----------->GT1           <---------TOE2(3)   <---------ARR11(3)      <---------MYB52(1)  <---------ANAC46           --------->YAB1      --------->AHL20(2)     <----------DOF2  --------->ARR11(3)            <---------ATHB12  <---------AHL20(2) <-----------------AGL1   ----------->GT1       ------------>CBF    <---------AHL20(2)     --------->At5g28300 -----------GT1  ------------>CBF  <---------ZAT6 --------->WOX13(1)--------->AHL20(2)    -----------   attatccctttaggccattaccaatatatcgtatatagtgtgacattttagtcaatcaaaattaagttatataaatttaacaatatatctagctgtaaat  17779500                                                                          --------->YAB1                                                               <---------ANAC58                                                               <---------ANAC58   --------->ICU4                                                  --------->AHL20(2)      ---------->DOF2                                        <----------DOF2     <----------DOF2 <----------ID1          -                                 <---------ARR11(3)    <-----------GT1    <---------ICU4            -                  ------------>CBF  <----------DOF2   <---------ICU4     <---------ATHB12           - >GT1      ----------->GT1  ------------>CBF      <---------AHL20(2) ------------>CBF          <-----   tttgtctgaaatatagcaaaaacaattcagttcaatttctttcttttttagtttaattatccctttcttgaatcaataaagacaaagattaagcattttt  17779600                                      <---------ANAC46                                      <---------ANAC58   <----------DOF2                    <---------ANAC58          --------->ATHB12  <---------DAG2                      <---------ANAC55(2)      <---------YAB1  --------------->AGL15               --------->ANAC55(2)      <---------ZAT6  --------->TOE2(3)                   <---------ANAC55(1)  --------->ARR11(3)  <---------------AGL15             <-----------GT1     --------->AHL20(2) ------->P             --------->AHL20(2)    <---------YAB1--------->AHL20(1) ----->MYB46(1)<----------ID1   <---------RVE1(1)     --------->AHL20(2)                       ------ ----->MYB83   ----------->GT1 <---------GLK1(2) --------->ANAC58                             ------- ------GT1   ---------->DOF2   --------->ARR11(3)--------->ANAC58      ------------>CBF     <--------   ccaaccttttacagaaaaagaaaaaaaaaatcagatttttacgtgttatgcaagaaaaaaatatactgataggcccaatagcctcttacacattcaccgc  17779700                                                      <---------ALFIN1                                                     --------->ZAT14                                                     <---------ZAT14                                                     <---------ZAT18                                                  ----------->RAV1(2)                                                  --------->At4g35610        <---------TOE2(3)                      <------ZmHOX2a(2)        <---------TOE1(3)                  --------->LBD16          <---------ANAC58   <----------DOF2        ---------->DOF2  ------>ZmHOX2a(1)        <---------ANAC58     --------->ZAT18 --->LBD16<------ZmHOX2a(1)--------->DAG2 <---------LBD16       <---------ANAC58         <---------ZAT18 -->DEAR3(1)       ----------->GT1   <---------HSFB2a(1)        <---------ANAC58  --------->ATHB12 -At5g28300       ------->TEIL       --------->HSFB2a(1)      ------>NtERF2 <---------DEAR3(1)   gatagcttttaaggaaaatgaatgtgaaaaaagttccaaacgttcctggatcacctgcactctctgccttgcttaagctcggtgttattggtggacttgg  17779800                                       --------->ZAT18                 <---------MYB52(1)                   <---------------AtSPL8                           <---------LBD16                  <---------ANAC46    <------ZmHOX2a(1)         <----------DOF2  --------->CCA1(2)  -         <---------AtMYB61    --------->ETT(2)            <-----------GT1   ---------->DOF2         <   actctattgcattggtagtagcatgtacaatgtcgatggaggacaccgtgccatcgtgtttaaccggtttaccggtatcaaagatagggtttgtattgtt  17779900               <-----------GT1           --------->AHL20(2)       ----------->GT1            <----------DOF2                                  ---------->DOF2   <---------YAB1  --------------->AtSPL8               --------->ZAT18  <---------YAB1             - -------------->AGL15             <---------DAG2        <---------ZAT18 >>>>>>>>>>>>>>>>>LFY -------- ---------------AGL15  ------->TEIL          <---------YAB1         <---------TOE2(3)       ---------   ttcttataagagttaaattactctgtacctctattacttttttgtttattatccagagggtactcattttaagataccattgtttgaaagagcaattatc  17780000                                                   ------>ZmHOX2a(2)                            <----     <-------TEIL   <---------ANAC46             --------->ARR11(3)                             ----- -------->YAB1  <---------DAG2                   <---------ARR11(3)                      <---------YAB1 ->AHL20(2)--------->HSFB2a(2)                  --------->YAB1                        <---------ARR14(2) >ICU4     <---------HSFB2a(2)                 --------->ICU4                         --------->ARR14(2)   tatgatgttcgttctcgaccttacgttgagaatagccaaactggaagtaatgatcttcaaacggtatgtgtgtttgtgtagttgtgagggtatgcttaag  17780100                                               <---------TGA1a                                               <---------At4g35610                                    <-----------RAV1(1)                                    =====================RAV                                       --                                   <---------TOE2(3)<---------YAB1              ------>ZmHOX2a(1) ---                           <---------ANAC58    --------->O2                --------->bZIP60(2)    ---                           <---------ANAC58    <---------O2                --------->ANAC58    ------                           <---------ANAC46    --------->TGA1a             --------->ANAC46  <------- -----At4g35610          <---------YAB1        --------->At4g35610         --------->ANAC58--------->At4g35610 ---->At4g35610        <---------At4g35610   <-----------RAV1(2)  <---------ZAT18          <---------At4g35610   ctgcaactctatctgattttgtttctgatgcttgtttgatgttgttcacaggtgactattgggcttagggtacttacacgtcctatgggagaccgcttac  17780200  Previous    Next  AGI:  At5g44130.1    Description:  FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR). Identical to Fasciclin-like arabinogalactan protein 13 precursor (FLA13) [Arabidopsis Thaliana] (GB:Q9FFH6); similar to FLA9 [Arabidopsis thaliana] (TAIR:AT1G03870.1); similar to unknown [Brassica rapa] (GB:ABK78690.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 17778317    to: 17779230    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g44140.1    Description:  ATPHB7 (PROHIBITIN 7). similar to ATPHB2 (PROHIBITIN 2) [Arabidopsis thaliana] (TAIR:AT1G03860.1); similar to ATPHB2 (PROHIBITIN 2) [Arabidopsis thaliana] (TAIR:AT1G03860.3); similar to prohibitin 1-like protein [Brassica napus] (GB:AAK07610.1); contains InterPro domain Band 7 protein (InterPro:IPR001107); contains InterPro domain Prohibitin; (InterPro:IPR000163) Range:  from: 17779718    to: 17780856    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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