Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->ARR14(2) <---------ARR11(3)              --------->YAB1 --------->GLK1(2)               <---------ICU4 ->ZmHOX2a(2)                   <---------YAB1                         ----------->RAV1(1) -ZmHOX2a(2)              --------->GLK1(1)   --------->TOE2(3)       --------->REM1(1) ---ARR11(3)              <---------GLK1(1)<---------CCA1(2)     --------->AGP1                <----- -->ARR14(2)        --------->AtMYB61<---------ARR11(3)       --------->YAB1                   <----- ---ARR14(2)       --------->MYB46(3)--------->ARR11(3)     --------->GLK1(2)              <---------GLK1(1) -RAV1(2)     --------->ARR14(2)--------->ICU4--------->YAB1XXXXXXXXXXXXXXXXXXXXX>MIR850   --------->GLK1(1)   caaaatctgaacatcgtttccaccatcgatttccatgattatcttctatcttattcactgagaatcagaactacaacaaaaccccaatatcggaattcct  17765200                                                                                                  ---                                                                                                  ---                                                                                         ------>ZmHOX2a(2)                         --------->TOE1(3)                                              <------ZmHOX2a(2)        <---------------AGL15                                                      ---------->DOF2---        --------------->AGL15                                       <---------GLK1(2)  --------->ARR11(3)       <-----------------AGL2                                       --------->ARR14(2) <---------AGP1       ----------------->AGL2                                       <---------ARR14(2) <---------ARR11(3)       ----------------->AGL3                       --------->At5g28300       <----------DOF2--------       <-----------------AGL3                      ----------->GT1 =============================HOX2a_HOX2a ----ANAC58              --------->TOE2(3)    ---------->DOF2      <------ZmHOX2a(1)   --------->AGP1 ----ANAC58        ------>ZmHOX2a(2)    <---------ATHB12           ============================HOX2a_HOX2a   tgagtcaattctaaaattggatcgaaaccctaatttcttccaataacttgaagcagtaactccaaaacaggattctcagacttttcaaagatctataagc  17765300                                        <---------HSFB2a(2)                               ----------->HVH21                            <-----------ARR10                           --------->ZAT2      ---------->DOF2      <---------At4g35610 --------->GLK1(1)         <---------ZAT2 ------>ANAC58             --------->At4g35610                                    ------------------- ------>ANAC46       ---------->DOF2  <---------ATHB12                 --------->ZAT2            >>>> ------>ANAC58      --------->YAB1   ------>MYB46(1)                   <---------ZAT2       --------- ->YAB1        --------->AHL20(2)    ------>MYB83                      --------->At4g35610--------->MYB52(1)   acgaaatccaaagaaaattcaataaaagcagctctgaccaatcgagaaactctctaactagttgagaaacaccagctcgaagaagagaaactaaacgaaa  17765400                                                --------->YAB1                                 <-----                                              --------->ANAC58                                 ------      <-----------GT1                         --------->ANAC46                        --------->ANAC58 ----->ANAC81                      --------->GLK1(2)         ------>ZmHOX2a(1)        --------->ANAC58 >>>>>MYB2                --------->ARR14(2)  --------->ANAC58      xxxxxxxxxxxxxxxx>smallRNA(s)----- >ANAC46                  <---------GLK1(2) --------->MYB46(3)   --------->ANAC46   ---------->DOF2   accaaaataaacgattcgataaaccctagattcccaaattctatcaacaagcaaaacagagtcctatacaaaacttcttctgcaattcaagcacaaacgt  17765500                             ------>ZmHOX2a(2)                            --------->GLK1(1)                          --------->ZAT14                     <---------ZAT14                ---------->DOF2             <------ZmHOX2a(2)             --------->CCA1(2)                    --------->ANAC58            <---------ARR11(3)                    --------->ANAC58  --------->ARR11(3) --------->ZAT14          --------->YAB1      <------ZmHOX2a(1)    --------->LBD16 --MYC3     --------->ARR11(3)           ================================HOX2a_HOX2a  <---------LBD16 ->MYC3     <---------ARR14(2)           <---------ATHB12--------->DEAR3(1)    --------->GLK1(2) <--- ---->ALFIN1--------->ARR14(2)           <------ZmHOX2a(2)------>NtERF2<---------ANAC46<---------LBD16   ggaagaaattggaagatccaaagaacactgatctctctctccgatcaataacaagctcgacgacgagaggaagtcgtagagaatttttccagggagattg  17765600                                                                                               <-----                                                                                             <-------                                                                                            <--------                                                                                            ---------                              --------->DAG2                                                <--------                         <----------ID1             <-----------GT1                       --------->MYB55(2)                        ----------->GT1         <---------AHL20(2)                  --------->MYB52(1)                       *TSS  ---------->DOF2    --------->AHL20(2)      --------->ANAC58  <---------MYB46(3)                      ---------->DOF2      <---------YAB1               --------->ANAC58 --------->ALFIN1                   --------->AHL20(2)<---------AHL20(2)                 --------->ANAC46 <---------AtMYB61 ------ZAT6    --------->AHL20(2)    --------->AHL20(2)             <-----------RAV1(2)  <---------DEAR3(1)   tgttattgatgagaaaatgaattaaaaaggaaaaagtatttaattttgattttaatactctctctcagtctcagacgcagtagtactagcggtggtggtg  17765700                                                 --------->ARR14(2)                                           --------->WOX13(1)                               <---------WRKY18(1)                              --------->WRKY45  ------>MYB46(1)                              --------->WRKY38(1)<---------ARR14(2)                              --------->WRKY12--------->AtMYB61                     <---------AHL20(2) ----AtMYB61           ------>ZmHOX2a(1)  <---------WRKY12                      <---------YAB1 --MYB46(3)   <----------DOF2--------->DOF5.7(2)------>MYB83                    --------->ICU4 -AtMYB61     <---------DAG2--------->TOE2(3) ------->GAMYB                   --------->YAB1 >ALFIN1   <---------------AGL15      --------->DAG2                <---------MYB52(1) -DEAR3(1) --------------->AGL15     ---------->DOF2        <----------DOF2  <------ZmHOX2a(2)   gtatttttgttttccacttttagtcctcaacgttgaccaaaaagtcaaccaaatccagcgttctttatccgtttttgcgatcatgtttatttgagtctcg  17765800                                              <-------GAMYB                                             <---------MYB46(3)                                           <-------GAMYB                                           <---------ANAC58                                           <---------ANAC58        <---------AHL20(2)                <------MYB83                     --------->YAB1    <---------AHL20(2)                    <---------MYB46(3)          <-------GAMYB    --------->AHL20(2)                    <------MYB46(1)   <---------ANAC58                       --   --------->AHL20(2)                    <---------AtMYB61  <---------bZIP60(2)                 -----   <---------ATHB12                      --------->MYB59 ----------->TGA1 <---------YAB1<---------At4g35610 --------->WOX13(1)        <------ZmHOX2a(2) ----------->GT1<---------ANAC58    <---------YAB1<------   agtcaattaataaatcgcagaaattagcgatcaaattgtttgtttggttgttaaacttcatgacgtttcgactgttatcatcaagattgcaactgattca  17765900                                                        ------->TEIL                           <-----                         ------->MYC3                <---------YAB1                            <-----                         <-------MYC3             <---------YAB1                              <------        --------->AHL20(2)                        --------->ICU4                              <------ -------->DOF2   <---------bZIP60(1)            --------->YAB1                             ------->PIF5 ---->TOE2(3)    --------->bZIP60(1)           --------->ICU4                              <-------PIF5 -TEIL  <---------AHL20(2)                   --------->YAB1                            <---------ZAT18   ttaaagtcataaaaatgtgacttcacatgtgtaaacctagttttgaagaatgatgatgaatatttgtcatttctcaaaaattgtattggagcacttgctt  17766000                                       ------->TEIL                               <------ZmHOX2a(2) -----DOF2              <------ZmHOX2a(1) ----DAG2--------->AtLEC2     <---------ARR11(3)          <---------AHL20(2)                     <--- ---ANAC58              ==============HOX2a_HOX2a      ------->TEIL                              <--- ---ANAC58   ---------->DOF2  --------->ARR11(3)   ------->TEIL        --------->TOE2(3)   <---------   ttttagtcgaaatgcaaaagtatgtaggagtagatcatatgaatctaaaaatgaatgtattttatatgtgtaacttcaatatgaaattcagttttgccac  17766100  Previous    Next  AGI:  At5g44090.1    Description:  calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G03960.1); similar to calcium-binding EF-hand family protein [Arabidopsis thaliana] (TAIR:AT1G54450.1); similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to putative protein phosphatase 2A regulatory subunit [Oryza sativa (japonica cultivar-group)] (GB:AAK13162.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40604.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65086.1) Range:  from: 17759993    to: 17765623    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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