Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ---------->DOF2                           --------->AHL20(2)                           <---------AHL20(2)                          <---------YAB1                        <---------ICU4                       <---------ATHB51                       --------->ICU4                   --------->AHL20(2)                                                              <-                   <---------AHL20(2)                                                              --                  --------->YAB1                                                                   <-                 <---------YAB1                                                                    --               --------->AHL20(2)                                                              ------               --------->YAB1     --------->AHL20(2)                                  --------->GLK1(2)        ----------->GT1--------->AHL20(2)                 <----------DOF2            --------->RVE1(1)       ----------->GT1 <---------AHL20(2)                 <---------DAG2           --------->AHL20(2)     ---------->DOF2 --------->YAB1            --------->ARR11(3)          <-----------GT1  --------- ---->DOF2 --------->AHL20(2)<---------TOE2(3) <---------ARR11(3)   <---------AHL20(2)<---------ARR11(3)   agaacaaaaaagataaattataaaaataattaaagataaatttttctaatatctgaaaaactttttgaatttttttttaacaaaaaaaaatctgaaaagg  17747800   --------->TOE2(3) --------HSFB2a(1)                                                                              ----- ------->HSFB2a(1)                                                                            ------- --------HSFC1(2)                    --------->ZAT6                                          -------- ------->HSFC1(2)          --------->YAB1                            <---------MYB46(3)--------->YAB1 ----->GT1                <---------YAB1                     --------->ATHB12         <---------AHL20(2) ->DOF2                 <-----------GT1                      --------->ATHB51        --------->AHL20(2)   aaatttcttaattgttagtaaatgttttatcatatagtaccactagttgattttaaaatcccattatttgtttgttatatacttatatataataaacata  17747900                                                                                 --------->GLK1(2)                                                                    <---------ARR11(3)                <-----------GT1                                  <---------AHL20(2)     ----------->HVH21                                           --------->AHL20(2) --------->ATHB12                                          <------MYB46(1)      <---------GLK1(2) ---->AHL20(2) <---------YAB1                              <------MYB83      --------->YAB1 -->TOE2(3)  --------->YAB1<---------ICU4          <---------CCA1(2)--------->ARR11(3) ->YAB1     <---------YAB1 ---------->DOF2<-----------GT1  ----------->GT1--------->YAB1   aattgatttgacatattataactatttcataaagacataaaaaataacttcacatatcatttggtaataaaatctataatcagaatctatttatgagatt  17748000                                                                                                  ---                             <---------DAG2                                                       ---                             <----------DOF2                                                     <---                         --------->GLK1(2)                       ------>ZmHOX2a(1)               ----                        <---------ARR14(2)                      --------->TOE2(3)                ----                        <---------GLK1(2)           <----------DOF2                  <---------------AGL15                        --------->ARR14(2)       --------->ARR11(3) <---------ANAC58 --------------->AGL15                       --------->At4g35610   ---------->DOF2 <-----------GT1   --------->YAB1    <---                  --------->DAG2         ------->GAMYB --------->YAB1   ---------->ID1           ----                 ---------->DOF2       -------->P<---------ARR11(3) <---------ANAC58-----------------   aagagaaaacaaattcaaaaaaagcagattcctttttcttcaaccccaaaagctctttcatattttccttacttgttccattggtaacccaaattagaag  17748100    ---------->DOF2 ----------->GT1 ------>ARR14(1)                                                              <---------AHL20(1) ------>CCA1(2)                                                               <---------AHL20(2) ------ARR11(3)                                                     ---------->DOF2                <- ----->ARR14(2)                                                   <---------YAB1                 <--- ----->ARR11(3)                                                  --------->YAB1<---------AHL20(2)---- ------ARR14(2)                             <------------CBF------------>CBF  --------->AHL20(1) <--- ----->ARR11(1)<------ZmHOX2a(1)    --------->ANAC58    <---------ICU4        --------->AHL20(2) ---- >AGL2     ---------->DOF2          --------->ANAC58   --------->ICU4   ----------->GT1         -----   atatggtaaagaagaaaggacaattaagtcatttactcacgaatggcattgttcgtaattttggcaatattaaagggtaatttattcttccttcttctat  17748200         --------->ZAT6    <---------ANAC58    <---------ANAC58 -----------CBF ------AHL20(1)                 *TSS ----->AHL20(1)                 ------>ZmHOX2a(1)                                                <--- ------ARR11(3)                 <----------DOF2------>ZmHOX2a(1)                               <----- ----->ARR11(3)              ---------->ID1 ------>ZmHOX2a(1)                                 ------- ------>TBP        <---------GLK1(1)    <-----------GT1                                 --------->ZAT6   atattgtcgtaaccctacttgaaatctccttgtcctttcatttctcctcctctctcaaatcgtctaattctctctctatctctctctctatctctactta  17748300                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                <---------AHL20(1)                                                                                --------->AHL20(2)                                                                            --------->ICU4                                                                           --------->At5g28300                                                                        --------->LBD16                                                                        <---------ZAT14                                                 <--------P             --------->ZAT14           <--                                                <---------MYB52(1)     --------->DEAR3(1)    <-------                                             <---------LBD16          --------->ANAC46      <-------- ------YAB1                        ---------->DOF2----------->GT1    <---------At5g28300 <---------ICU4 ----ICU4                --------->AHL20(2) <---------LBD16       <-----------HVH21 <---------AHL20(2) -->ICU4   ---------->DOF2      --------->AHL20(2)<---------MYB46(3)<-----------GT1 --------->AHL20(2)   ttatttcttaagttaaagaaacagagattaaaaaataaaaagccttctcgggttgtttaaaaatactgtttcaccgcagtaattaatttaaaaattactg  17748400                                                                                         --------->LBD16                                                                                         ------>NtERF2                                                                                        <---------ATERF1(2)                                                                                        --------->ATERF1(2)                                                                                        --------->DEAR3(1)                                                                                       <---------LBD16                                                                                       --------->RAP2.3(1)                                                                                       --------->ATERF1(1)                                                                                       <------NtERF2                                                                                      <---------ATERF1(1)                                                                                      ------>NtERF2                                                                                      <---------RAP2.3(1)                                                                                     <---------DEAR3(1)                                                                                    --------->ATERF1(1)                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                  --------->RAP2.3(3)                                                                                  --------->DEAR3(1)                                                                                  --------->O2                                                                                  <---------O2                                                                                  --------->RAP2.3(2)                                                                                  <---------DEAR3(1)                                                                                 --------->ERF1                                                                                 --------->ATERF1(1)                                                                                 --------->DEAR4(2)                                                                                 --------->RRTF1(1)           --------->ANAC58                                                      --------->RAP2.6(1)           --------->ANAC58                                                      --------->RAP2.3(1)         <---------ANAC58                                                        --------->ORA47(2)         <---------ANAC46                                                        <------NtERF2    <---------bZIP60(2)                                                         <---------RAP2.3(1)    <---------bZIP60(1)                                                         <---------ATERF1(1)    --------->bZIP60(1)                                                         ------>NtERF2    <---------O2                                                                --------->ABI4(2)    <---------TGA1a                                                            --------->RAP2.3(2)    <---------ANAC55(2)                                                        --------->DEAR3(1)    --------->TGA1a                                                           --------->RRTF1(1)    ===========================bZIP_DOF                                       --------->RAP2.6(1)    <---------ANAC46                                                         <---------ATERF1(1)    <---------ANAC58                                                         --------->LBD16    <---------ANAC58                                                         ------>NtERF2     ------    --------->O2                                                             <---------RAP2.3(1)   --    --------->ANAC55(2)                                          --------->DEAR3(1)<-----------HVH21   ----------->STF1                                            ------>NtERF2--------->ANAC46 --------   ----------->bZIP910(1)                                     --------->ANAC46--------->ATERF1(1)  --  <---------TGA2(2)                                           --------->ANAC58--------->RAP2.3(1)  -- ----------->TGA1                                 <---------ANAC58         <---------LBD16<------NtERF2 ----------->HVH21               --------->ICU4   <---------ANAC46    <-----------GT1--------->DEAR3(1) -------ETT(2)      ---------->DOF2               <---------ANAC58------>NtERF2<---------DEAR3(1)---- --At5g28300  ------->TEIL   <---------------------WRI1     <---------ALFIN1<---------DEAR3(1) <----- ---GT1  <---------ANAC58  --------->MYB46(3)    <-------TEIL --------->ANAC58--------->ERF1 --------   tcgatgacgtggcatgcacttaaaaagaaacagccatgaatacaaaaacgatgcgtcttcccccacgccgagttacctccggcgccgtcgccggcaaaca  17748500                                 ------>NtERF2                                --------->RAP2.3(3)                                --------->DREB2C(2)                                --------->DEAR3(1)                               --------->RAP2.3(1)                               --------->ORA47(2)                               <------NtERF2                               --------->ATERF1(1)                              --------->At4g35610                              --------->ABI4(1)                              ------>NtERF2                              <---------ATERF1(1)                              <---------At4g35610                             --------->RRTF1(2)                             --------->RRTF1(3)                             --------->DEAR3(1)                             <---------DEAR3(1)                             <---------ATERF1(2)                             --------->ATERF1(2)                             --------->RAP2.3(3)                             --------->RAP2.3(2)                                       <---------ALFIN1                            --------->RRTF1(1)                                       ------>NtERF2                            --------->RAP2.6(1)                                      --------->ABI4(1)                            --------->DEAR4(2)                                      --------->ANAC58                            --------->ERF1                                          --------->ANAC46                            --------->RAP2.3(1)                                     --------->ANAC58                            --------->ORA47(2)                                      --------->DREB2C(2)                            --------->ATERF1(1)                                     --------->RAP2.6(2)                           ------>NtERF2                                            ------->GAMYB                           --------->ABI4(1)                                        --------->DEAR3(1)                           <---------ATERF1(1)                                      --------->DEAR4(1)          --------->LBD16 ------->GAMYB                                            --------->MYB46(3)       --------->LBD16    --------->ANAC46                                       <---------ALFIN1       ------>NtERF2      --------->DEAR3(1)                                     --------->AtMYB61      --------->ANAC46    --------->DREB2C(2)                                   --------->MYB46(3)   --------->ARR14(2)     --------->AtMYB61                                     <---------MYB55(2)   --------->GLK1(2)      <---------ALFIN1                                   <---------MYB55(2)   <---------ARR14(2)   --------->ABI4(1)                                    --------->MYB46(3) --->MYB46(3)          --------->DEAR3(1)                                    <---------MYB52(2) ------->ANAC46        --------->AtMYB61                                     <---------MYB111(2) ->ANAC58 --------->At5g28300--------->RAP2.6(2)                             <---------MYB111(1) ------->ANAC58        <---------ALFIN1                       <---------ATHB12------->GAMYB ------->ANAC58       <---------MYB55(2)                      <------ZmHOX2a(2)-------->P       ----- ----->MYB52(1)       --------->MYB46(3)                   --------->DEAR3(1)<---------MYB46(2) ----- ----MYB52(2)       --------->ANAC46              --------->ANAC58          ------>MYB83   --------->ZAT14 ->ANAC58<---------ANAC46--------->MYB46(3)       --------->ANAC58          ------>MYB46(1)<---------ZAT14   aacggaatccgccgtgataaatccaccaccgccgccgactaaatccatcgtcaagaaaacgccgatcatccctcgaccaactaccaccgccactgtagcc  17748600            <---------MYB46(3)        <---------ANAC58          <---------MYB52(1)          <---------ANAC58         <---------MYB52(1)          --------->MYB52(2)        <---------DEAR3(2)         --------->ARR14(2)     <---------ZAT2                <---------MYB52(1)    <---------ARR14(2)            <-------GAMYB                                <---------ARR11(3)    --------->ARR14(2)           ----------->GT1                               --------->ARR11(3)  --------->DEAR3(1)           <---------LBD16                           <---------LBD16        ----- ---->TOE2(3)          --------->At4g35610                         <---------ALFIN1           <------ ---->TOE1(3)          <---------At4g35610                        <---------ZAT18 <----------DOF2   ttagccgagccggtttgttcgaatcagctcttagccggttacttggctcatgagtttctcaacaatggcacactcttcggagagctttggaatccaacta  17748700  Previous    Next  AGI:  At5g44060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40594.1) Range:  from: 17748232    to: 17749132    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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