Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <----------DOF2                                                 <----------DOF2     <---------ARR11(3)               ===============================================================     --------->ARR11(3)               <-----------------AGL1    --------->YAB1                    ----------------->AGL1   --------->ICU4                     ----------------->AG   <---------YAB1                     <-----------------AGL2 --------->YAB1                       <---------YAB1                                             <--- ----->TEIL              ---------->ID1--------------->AGL15                               <--------- ---AtLEC2 <----------DOF2          <-----------GT1                              <---------AHL20(2) >AtLEC2 <---------YAB1 <-----------GT1<---------------AGL15           <----------DOF2   ------>ZmHOX2a(1)   gaaccatgatcatctttgtgtttttttttccttctgtattaccattttgggcctttgtgaaattgattttgggcttttgttatataatctcctctttctc  17731500                                         ----------->GT1                                        --------->DAG2                                       ---------->DOF2                                    <------MYB46(1)                                    <------MYB83                                    ----------->GT1                                   --------->MYB59                                <---------ARR14(2)                                <---------GLK1(2)                                --------->ARR14(2)                             --------------->AGL15              --------->ANAC55(2)                             <---------------AGL15              <---------ANAC55(2)                            <-----------------AG <---------------AtSPL8   <---------TOE2(3)        --          <---------WOX13(1)----------------->AGL1        --------->AHL20(1)                       --        --------->ATHB12    ----------------->AGL2        <---------ARR11(3)               --------->ARR11(3)    -------->P              <-----------------AGL1        <---------AHL20(1)         <---------ANAC55(2) =============================================MADS_MADS   --------->AHL20(2)         --------->ANAC55(2) -------DOF2                ----------------->AGL3   <-------TEIL        ---------->DOF2--------->YAB1 -DOF2<---------MYB59       <-----------------AGL2  --------->CCA1(2)--------->ZAT6 <-------TEIL ----   tttctctacctgattggattcaagaacatagccagatttggtaaagtttataagatacaaaatattaagtaagactaaagtagaaatacataataacttg  17731600                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          --------->AHL20(1)                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                             --------->MYB52(1)       --------->WOX13(1)           --                                      --------->YAB1               --------->ANAC46             <----                                  ---------->DOF2                  --------->ANAC58             ----- ------->ANAC58             --------->ARR11(3)                     --------->ANAC58             ----- ------->ANAC58             <---------ARR11(3)                <---------At4g35610       --------->ZAT6 ------>DOF2            ---------->DOF2    --------->MYB46(3) --------->At4g35610 <---------AHL20(2)   aaagctactctaagttatacaaattctaaagaactcaaaagaataacaaacagtagaagttggaagctcaagcaattaaattatataaaaacactaacta  17731700                            <-----------RAV1(1)                        <---------ARR11(1)                        <---------ARR14(2)                        --------->ARR11(3)   --------->At4g35610  <---------ARR11(3)                                                        ---   <---------ZAT2       --------->ARR14(2)                                                <------MYB46(1)   <---------At4g35610 <---------CCA1(2)                                                  <------MYB83   --------->ZAT2      ------>MYB83                                                      ------------ --------->ZAT14       <---------ARR14(1)                                                --------->MYB111(1) <---------ZAT14       ------>MYB46(1)                                 <---------MYB59   <----------- ------->ANAC46      --------->AtMYB61                                --------->ANAC46   --------->MYB46(2) -----ZAT14          <---------MYB111(1)                        --------->TOE1(3)        --------->MYB59 ---->ZAT18         --------->ANAC46           <----------DOF2  --------->TOE2(3)        ------------ ---->ZAT14 ------>ZmHOX2a(1)   <---------At4g35610             --------->TOE1(2)      <---------MYB52(1)   cactgagctgtctccttcttccaccaaatcttgttgctgtctcttgaagctttcttatgacacaaaccttagacccaatttcactcacagtttggtacaa  17731800                                                             --------->YAB1                        <-                                                             <---------ICU4                      ---- ------>TOE2(3)                                             <---------ATHB12                 -------- --->AtSPL8                              <-----------GT1  --------->WOX13(1)                -------->P ----AtSPL8               <---------ARR11(3)            ------------>CBF                <-----------GT1 --->AtSPL3               --------->ARR11(3)   <----------DOF2          *TSS      <-------TEIL  <----   cctcagttttcttcacaacaaattcaaacatcttacccttatattacctctttatctcttcaatcatcaaaacacatagtcacatacatttctctacccc  17731900                                --------->ANAC58                          <---------ZAT18                          --------->ZAT14                          <---------ZAT14         --------->At4g35610    --------->ANAC46    <---------ZAT14  <---------ZAT14    <---------At4g35610<---------ANAC46       --------->MYB46(3)    --------->ZAT14<---------At4g35610       ------>MYB83 <---------ZAT2 --------DAG2      --------->At4g35610       ------>MYB46(1)          <---------TOE2(3) -->NtERF2         <---------ZAT2    --------->AtLEC2     --------->ZAT2 ->ANAC46<---------At4g35610------->TEIL   <---------MYB59--------->At4g35610 -----ALFIN1   --------->LBD16  --------->ANAC58          <---------At4g35610         --------->MYB52(1)   accttctgctctgcttccgagagctcagtgtacctcgccatggaaccaaacaccatggccagcttcgacgatgaggtaagagaaaacaaaaccgaaactt  17732000                       <---------GLK1(2)           --------->TOE2(3)   <---------LBD16                 <-----------GT1                 <---------ARR11(3)   <---------ANAC46               <----------DOF2                   --------->ARR11(3)   <---------ANAC58            ---------->ID1 <----------DOF2    --------->AHL20(2)      <---------ANAC58       ------>ZmHOX2a(1)    <---------TOE1(2) ------>MYB46(1)         <---------AHL20(2)<-------TEIL         <-----------TGA1    <---------TOE2(2) ------>MYB83         --------->TOE2(3)    ------->TEIL         <-----------HVH21   ------>ZmHOX2a(1)<---------MYB59  --------->ARR14(2) --------->ANAC46        <---------At4g35610<-   gtttcctaggttttgttctttaccaaattctttcatttggattcacattaaaatctcaacgtaatgtacatttcgtggatgcagcatcgtcattcctcat  17732100                                                                               <---------ANAC58                                                                           --------->ALFIN1                                                                          ------->MYC3                                                                          ------->MYC2                                                                          <-------MYC2                                                                          <-------MYC3                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                         <---------bZIP60(2)                                                                         --------->TGA1a                                                                         --------->O2                                                                         <---------TGA1a                                                                         <---------O2                                                                         <---------ANAC55(1)                                                                         --------->ANAC55(2)                                                                        ------------>OsbHLH66                                                                      ----------->HVH21                                                                     <-----------HVH21                                                                    --------->ALFIN1                                                                  <---------bZIP60(2)                                                                  <---------TGA1a                                                                  <---------ANAC58--------->WRKY12                                                                  <---------ANAC58--------->WRKY38(1)                                                                  <---------O2 <---------ANAC58                                   ================================================bZIP_DOF         --------->CCA1(2)         =========================================bZIP_DOF        <---------GLK1(2)          ---------->DOF2                <---------ANAC46--------->ARR14(2)        --------->ARR14(2)        <---------WRKY38(1)        <-----------RAV1(1)  <---------ARR14(2)        <---------ARR11(3)        <---------WRKY12        <----------DOF2<---------ANAC55(2)        --------->ARR11(3) =================================================MYC_MYB        <---------ARR14(2) <----------CDC5                ==================bZIP_DOF      <---------TOE2(3)  <---------ANAC46          <-----------HVH21----------->HVH21      ----------->ARR10 <---------------------WRI1--------->YAB1  <---------ANAC55(1) <---------LBD16 --------LBD16      <-----------RAV1(1)     --------->YAB1=========================bZIP_DOF   tctcggctaagatttgcaaagtctgtggcgatgaggtcaaagacgatgacaatggtcagacttttgtggcgtgtcacgtgtgcgtttacccggtttgcaa  17732200                                                                            <-------TEIL                                                                           <--------P                                  <-----------RAV1(1)           --------->ANAC58                              --------->MYB46(3)                --------->ANAC46                          --------->At5g28300                   --------->ANAC58                          --------->DOF5.7(2)           <----------DOF2 <---------TOE2(3)                         ----------->GT1           <---------ALFIN1----------->RAV1(1)         ------->TEIL    ------->GAMYB           ----------->RAV1(1)  ---------->DOF2      <---------YAB1  --------->MYB52(1)      --------->AtLEC2  ------->GAMYB      --------->TOE2(3)-   accttgctatgaatatgagcgtagcaacggtaacaaatgttgccctcaatgcaacactctttacaaacgccacaaaggtagattaacttaaaccctgttt  17732300                           --------->YAB1                     <---------WRKY18(1)       <---------ANAC58           --------->At4g35610                  <---------ANAC58             <---------AtLEC2         <------NtERF2            --------->ARR11(3)                 <---------ANAC46        --------->LBD16            <---------ARR11(3)                 <---------ANAC58       --------->DEAR3(1)         <---           <---------CCA1(2)     ----------->GT1<----------DOF2      <---------LBD16          ------- ----->ZmHOX2a(1) <---------ANAC58           <---------YAB1    ---------->DOF2                ------>ZmHOX2a(1)   tcctctcaaaactatatctagcttgactctcatactggtgaattgttttgcttgaaggctctccaaaaatcgccggagatgaagaaaacaatggtcctga  17732400  Previous    Next  AGI:  At5g44020.1    Description:  acid phosphatase class B family protein. similar to acid phosphatase class B family protein [Arabidopsis thaliana] (TAIR:AT1G04040.1); similar to unknown [Populus trichocarpa] (GB:ABK93764.1); contains InterPro domain Vegetative storage protein/acid phosphatase (InterPro:IPR014403); contains InterPro domain Plant acid phosphatase; (InterPro:IPR010028); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519) Range:  from: 17729636    to: 17731563    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g44030.1    Description:  CESA4 (CELLULOSE SYNTHASE 4); transferase, transferring glycosyl groups. Identical to Cellulose synthase A catalytic subunit 4 [UDP-forming] (CESA4) [Arabidopsis Thaliana] (GB:Q84JA6;GB:Q8GZN8;GB:Q9FNC3); similar to CESA1 (CELLULOSE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to CESA3 (CELLULOSE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to cellulose synthase 2 [Eucalyptus grandis] (GB:AAY608 Range:  from: 17731872    to: 17736950    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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