Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------AHL20(2)      <---------AHL20(1)   --------->YAB1                                                  <---------ARR11(3) -----------GT1                                                    --------->ARR11(3) ------->AHL20(2)                                                  <---------AHL20(1) --------AHL20(2)                                             --------->AHL20(2) -------AHL20(2)                                        --------------->AGL15 ------>AHL20(2)       <-------TEIL                     <---------------AGL15 >ANAC58     <-----------GT1                           <-----------------AGL3 >ANAC46   <---------AHL20(2)                       <----------DOF2--------->AHL20(1) >ANAC58   --------->AHL20(2)                 <-----------GT1 <---------AHL20(2)   tttaatcatatatttaaactacatatacatctatttgaaacatggaatttacatctttctatatttaaaaatatttgaaatgaagtttcaaaattttcat  17693700                    >>>>>>>>>RAP2.2              <-----------GT1          --------->TOE2(3)         --------->ANAC46                                        <---------ANAC55(2)         --------->ANAC55(2)                                   --------->YAB1          <---------AHL20(2)      <---------ARR14(2)                 --------->YAB1     --------->WOX13(1)         --------->AHL20(2)      --------->ARR14(2)           ---------->DOF2  --------->ANAC46             --------->YAB1 ---------->DOF2    --------->TOE2(3)   <---------YAB1--------->ANAC46   ----------->GT1   atgtaaagtatacgttatacaatctaaactagtattcaaaagatgataacatctacacaaaacaatcacatgaataggttaaatcaaaattaaaaataga  17693800                              <-----------------AGL1                              <---------YAB1                  --------->HSFB2a(2)                  <---------HSFB2a(2)                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)               <---------ARR11(3)               <---------AGP1<-----------GT1               --------->ARR11(3)                                                                   <              <---------CCA1(2)--------->ZAT6                        --------->AHL20(2)             -    <-----------GT1     --------->ICU4   <-----------RAV1(2)--------->TOE2(3)                      --  <----------TaMYB80    --------->AHL20(2)                <---------YAB1                     <-------   actgatataccctcttagatctcgaaatatttatcagtatgggccagaagggctatagttattcttagaaaaaaaatggaggtaatgtcgaaattgacga  17693900                                           ----------->GT1                                           <---------YAB1                                         --------->YAB1          <---------ARR14(2)        <---------ARR11(3)                <---------YAB1       <---------ANAC46             --------->ARR11(3)                --------->ICU4       <---------ANAC58            --------->YAB1                   --------->YAB1       <---------ANAC58           <---------TOE1(3)                >>>>>>>>>MYB98 ---------AHL20(2)      <---------TOE2(3)<---------ICU4  --------->MYB46(3)                      <--- -------->AHL20(2)    ---------->DOF2   --------->ICU4 --------->ANAC46<---------ICU4            ---- ------->AHL20(2)  --------->YAB1 <---------YAB1     <---------At4g35610    <---------ANAC55(2) <---- --TOE2(3)--------->ARR14(2)      <---------TOE2(3)  --------->At4g35610  --------->AHL20(2)    <----   aattaataggcgtatttttaaaaataaaggttgtttaagataatcatgaaaaattagcagccactgagtaacataattacataaacagagacacacttac  17694000                           <-----------GT1                                                         <-                       ------>ZmHOX2a(1)                                                     <-------                     ------>ZmHOX2a(2)                                                       --------                    <------ZmHOX2a(2)                                                        <-------                   <---------ARR14(2)                                                ------>MYB83  <- ------------AGL15 --------->ARR14(2)             *TSS                               --------->MYB52(1) ----------->AGL15 --------->ARR11(3)           ----------->HVH21                    ------>MYB46(1) -----ANAC58       <---------ARR11(3)         --------->At4g35610                  <---------MYB59 <- -----ANAC58     ----------->ARR10           <---------ARR11(3)         ------>ZmHOX2a(1)  ----------   ttgaaatagaaaacaaaataagatccttttaacaacaacaacaacaacatctcacaggtctcgctaagacggtcctaaacaaaaaccaaactgtttaggt  17694100                                                                                          <---------ARR14(3)                                                                                          --------->ARR14(3)                                                                                          <----------                                                                                          --------->ARR11(3)                                                                                     ------>ZmHOX2a(2)                                                                               <---------MYB52(1)                                                                             <---------bZIP60(1)                                                                             --------->bZIP60(1)                                                                             <---------ANAC58     <---------DEAR3(1)                                                      --------->O2 <---------ARR14(2)     --------->DEAR3(1)                                                      <---------ANAC58    <------NtERF2                                                            --------->TGA1a    --------->ATERF1(1)                                                      <---------ANAC46  <---------DEAR3(1)                                                         <---------TGA1a --------ANAC46                                                              <---------O2 --------->ARR14(2) --TOE1(3)                                                                ----------->HVH21  -------- ->MYB59 ------>NtERF2                                                    ----------->TGA1<---------ARR11(3) --TOE2(3)                        --------->ANAC46                      <---------ANAC55(2) ------>ZmHOX2a(2) --------ANAC58                   --------->ANAC58                      <---------ANAC58 <---------GLK1(1) --------ANAC58                   --------->ANAC58                      --------->ANAC55(2)<------ZmHOX2a(2) ----------->WRI1      ---------->DOF2    <-----------GT1               <---------ANAC58 --------->GLK1(1)   ttcgtcgtcgacgcgctctcatcaacaaagtcccatacgaaatttaaccaaaactatatatcgagggacgaagcgcgtgacgttagatcggagatctcac  17694200                <---------TOE2(3)        --------->At5g28300       --------->LBD16      <---------DEAR3(1)     <---------LBD16   ------>ZmHOX2a(2)  <------ZmHOX2a(2)                          --------->TOE1(3) --------->ARR14(2)                        <---------TOE1(3)                                 <------- <---------ARR11(3)                        <---------TOE2(3)                                 <------- -ARR10----------->GT1        <----------DOF2--------->TOE2(3)                             ---------- --->HVH21      <---------TOE1(3)         <---------DOF5.7(2)                          <---------MYB52(1)   cgagatcgccggtgaattagggtttctacttcctttgttcttgttaacgttatatgaaagtttggaattcaagatgactcaatctatctgttcgtcgtca  17694300                                                                      <-------TEIL                                                                     <---------ARR11(3)                                                                    <---------GLK1(2)                                                                   --------->HSFB2a(1)                                                                  <---------TOE1(2)                                                                  <---------TOE2(2)                                                                 <------NtERF2                                                                 <-----------RAV1(2)                                                                ------>NtERF2                                              <---------DEAR3(1)<------NtERF2                                              ----------->HVH21--------->DEAR3(1)                                              --------->DEAR3(1)--------->LBD16                                         --------->ARR14(2)    --------->RAP2.3(2)                                    --------->ANAC58          --------->RAP2.3(1)                                    --------->ANAC46          --------->RRTF1(1)                                    --------->ANAC58         <---------ATERF1(1)    --------->WOX13(1)           --------->ANAC46            --------->ABI4(1)  ======================HOX2a_HOX2a --------->AtLEC2        --------->ANAC46  <------ZmHOX2a(2)            --------->ANAC46           <---------At5g28300                      <- <---------ARR11(3)            --------->ANAC58 <------NtERF2------>NtERF2         <---------DAG2  <- --------->ARR11(3)            --------->ANAC58------>NtERF2--------->DEAR3(1)     <----------DOF2 <- ----TGA1              ----------------------->TaNAC69(2)<-----------GT1          <---------DAG2----- ----HVH21             <----------DOF2   <---------ARR14(2)--------->MYB46(3)  <-----------GT1<------ >ID1            ------>ZmHOX2a(1)<---------ALFIN1   --------->HSFC1(2) <---------YAB1      <--------   caagatcaatcttcttctcctcgctctttgatcacaccacgcaaatcggcgacgaagtttcaccgccgcaggttcttattgatacctttttgtgctttgt  17694400                                                                          <---------ANAC58                                                                      ---------->DOF2                                  =================================================================== --------ANAC58                   =================================================================== --------ANAC58                   --------------->AGL15             <---------YAB1 --------ANAC46                   <---------------AGL15     --------->ANAC58 ----->ID1      --------->DAG2    <---------ANAC58          --------->ANAC58          <---------GLK1(1) -----RAV1(1)  ---------->DOF2    <---------ANAC58       <------ZmHOX2a(2)<---------ANAC58       ---- --DOF2 --------->ATHB12       <-----------GT1--------->CCA1(2)   --------->YAB1      --------->GLK1(1)   tgcttctgaattatgggaaaaggaatggtattgtttccgttttaagagatttgagttcgatcaagacatcataaaagcttgtttagggatatcactgaga  17694500                 --------->ICU4  ------>ZmHOX2a(2)               --------------->AGL15               <---------------AGL15              ----------------->AGL3              <-----------------AGL2              ----------------->AGL1              ----------------->AGL2              <-----------------AG<----------DOF2              ======================================================MADS_MADS              <-----------------AGL3       --------->At4g35610     --------->ARR11(3)       <---------At4g35610     <---------ARR11(3)      --------->MYB52(2)       --------->ARR14(2)    <---------MYB52(1)         <---------AGP1  <---------MYB46(3)           <---------ARR14(2) <---------TOE2(3)            <---------CCA1(2) ===============================MADS_MADS         <-----------------AGL3                   <--------- ===============================MADS_MADS         --------->TOE1(3)               <---------ANAC46 ----->GLK1(2)<-----------------AGL1              --------->TOE2(3)---------->ID1<------ZmHOX2a(1) <-   attttggttagcttcagccatttttggaaactggatctttgagttttctaaacctgaaattggaaatttgttgtttagggggaggagtgtatttaacatg  17694600  Previous    Next  AGI:  At5g43930.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G04140.1); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G04140.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71512.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40529.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 17694050    to: 17698309    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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