Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------HSFB2a(2)                                        --------->HSFB2a(2)                                       <---------LBD16              --------->MYB52(1)                                   <---------ARR11(3)               <---------DOF5.7(2)   --------->ARR11(3)                                   --------->ARR14(2)              <---------WRKY45  <---------AHL20(2)                                   <---------ARR14(2)              <---------WRKY38(1)    >>>>>>>>>>GT-1                                   --------->ARR11(3)              <---------WRKY12  --------->AHL20(2) --------ALFIN1                --------->YAB1                 ---------->DOF2    --------->ZAT6 -----ALFIN1        ------->TEIL   --------->GLK1(2)         <---------AHL20(2) <---------TOE2(3) ----GT1  ----------->GT1     ----------->GT1                --------->AHL20(2)<-----------GT1   acctccttggacctgaaaaatgaaccatagaaatgaaaatctccagaaccattcgatatcaaattaaagtcaacgaagaattaacaataaatgatatagt  17687100                                 <---------LBD16                          <----------DOF2                         ------>ZmHOX2a(2)                        <---------RVE1(1)                        <------ZmHOX2a(2)                       --------->ARR11(3)                       <---------ARR11(1)                                                    <-------                       <---------ARR11(3)           <---------ALFIN1                         <-------                       --------->ARR14(2)         >>>>>>>>>>>>>>>>>LFY                       --------                       <---------ARR14(2)        --------->ANAC58                            --------                      <---------ARR14(1)         --------->ANAC46                     --------->MYB46(3)                      <---------CCA1(2)          --------->RAP2.6(2)                --------->AtMYB61                   <---------LBD16               --------->ANAC58               --------->WRKY45                  <---------ANAC46--------->HSFB2a(2)   --------->At5g28300     --------->WRKY12           <---------ANAC58      ------>ZmHOX2a(2)------>NtERF2                 --------->WRKY38(1)           <---------ANAC58  <---------YAB1 ---------->DOF2                ---------->DOF2------->GAMYB   catcgaccttgaagcttgtgcctcggatcttttgatcgggaattggaaaagacgccactgtgactaagtaatctagacaaagttgaccacaaccgagctg  17687200                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                       <------MYB83                                                                       --------->MYB55(2)                                                                       <------MYB46(1)                                                                       --------->ATHB12                                                                   --------->ATHB12                                                                  <---------YAB1                                                               --------->ANAC58                                                               --------->ANAC58   --------->ARR14(2)                                                             --------->ANAC46     <---------ARR14(2)                                                            --------->TOE1(2)   <------NtERF2                                                           --------->ANAC58    --------->LBD16                                                          <-------TEIL<---------AtMYB61                                                         --------->CCA1(2)     <------NtERF2                                                         --------->ARR14(1)   <---------LBD16                         <-----------GT1                <---------ARR14(2)   <---------ANAC46          --------->GLK1(2)                             --------->ARR14(2)   <---------LBD16 --ZAT2   <-----------ARR10                             <---------GLK1(2)<--------P --At4g35610            <-----------GT1                 --------->ARR11(1) <------MYB83        <----- ->ZAT2  <---------GLK1(2)                            ----------->ARR10<---------MYB46(3)    <------- ->At4g35610    <---------ATHB12          --------->CCA1(2)--------->ANAC58<------MYB46(1) <---------   caatttgcagagaatctaatcagtttttatcagttcatgagaagaaacgagagaaatagatacgcacgacgattggttggccgggaatcgcttcgtcgga  17687300                     ------>NtERF2                     --------->LBD16                   <---------LBD16                --------->At4g35610                                         <---------AHL20(2)                <---------ZAT2                                              --------->ATHB12                --------->ZAT2                                             --------->AHL20(2)                <---------GLK1(1)                                          --------->ICU4                <---------At4g35610                                    <---------MYB52(1)                --------->GLK1(1)                                    --------->MYB59         --------->ATHB12                                          --------->ARR14(1)      --------->bZIP60(1)                                         --------->ARR11(1)      <---------bZIP60(1)                                         --------->ARR14(2) -NtERF2<---------YAB1                    <---------ZAT6          <---------GLK1(2) --DEAR3(1) ------>ZmHOX2a(2)       <-------TEIL                  <---------ARR14(2)                < --HVH21--------->ICU4       ----------->GT1   <------NtERF2     <------ZmHOX2a(1)<------ZmHOX2a(1) -   gcaagatgacatgatcggagctccggctatgtgctaaattcgtagtggcagagagagggagggagaaggattcggtatttattaggaggcctgaattttg  17687400                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                              <------ZmHOX2a(1)                                                                            --------->LBD16                                                                           --------->HSFB2a(2)                                <---------AHL20(2)                         <---------HSFB2a(2)                             <---------ARR14(2)                       <---------HSFC1(2)     <-------                             --------->ARR14(2)                   --------->ANAC58          <-------- ----------->GT1         <---------LBD16                          *TSS--------->HSFB2a(1) <----------DOF2 <------MYB46(1)    <---------ATHB12                <---------ANAC58  --------->HSFC1(2)  ----------- <------MYB83 >>>>>>>>>MYB2--------->LBD16--------->GLK1(1)       --------->ANAC58     <-----------GT1 ---------AtMYB61 ------>MYB46(1)    --------->At4g35610 <---------YAB1    <---------LBD16<---------- -------->MYB59   ------>MYB83 --------->AHL20(2)   <---------ANAC58  <---------HSFB2a(1) ===========   gtttggttaaaccgaaaaccaaatcaaaccggatttaatagctgaaatcaaattgagtgatgactgaaacgaaatttccaggatttgattttctttttat  17687500                                             <---------DAG2                                             <---------------AGL15                                             --------------->AGL15                                             <----------DOF2                                --------->YAB1                                                   ----      <---------AtLEC2       --------->YAB1<-----------------AG                                 <---- --YAB1          <---------ANAC46 <---------YAB1                                         <----------ID1 ---TBP<------------CBF      <---------ICU4<-----------------AGL1                  ----------->GT1 ---->AGL15      <---------ANAC58--------->ARR11(3)                             --------->At4g35610 -----AGL15      <---------ANAC58<---------ARR11(3)                             <---------At4g35610<- ============================================================MADS_MADS ----------->GT1 ---------->DOF2   agtcgtttgcattgcattttcttggacttaaaaatgatatttgataacttttttgggaatttcatggaatggaatgtaaattagctggtaaaagacaaat  17687600         ------>MYB46(1)         ------>MYB83       --------->AtMYB61       <---------MYB59                                                                   ---------->ID1 ---------->DOF2               --------->AHL20(2)                                    <----------DOF2 ----->YAB1                   <---------YAB1                  <-----------GT1  <----------DOF2 -----ATHB12                 --------->AHL20(2) <------ZmHOX2a(2)              <---------DAG2  ------ --------YAB1  --------->TOE2(3)<---------AHL20(2)     <-------TEIL           <---------DAG2 <-------   cataaaagaccaaacaacatcaaatcaccaatattatatatcaagttgagatcaaaattcatttatacgtttcatgagcacctttttctttgtccattag  17687700                       <---------ARR11(3)                       --------->AHL20(2)          --------->ARR11(1)          --------->ARR11(3)          <---------ARR11(3)          <---------ARR14(2)          --------->ARR14(2)        ----------->ARR10 <---------AHL20(2)    ----------->GT1    --------->AHL20(1)                              <----------DOF2     <---------ZAT14  ---------->DOF2      <---------AHL20(1)                           <-----------GT1        --------->ZAT14 --->MYB52(2)     <-------TEIL                                <----------DOF2      <-------TEIL --MYB52(1)--------->CCA1(2)                                  <---------DAG2  ---------->DOF2   ttgagaaagtaagatatgggttcaatattttataagaccaagacccaaaaccatttttctaatacttttttttctttgttaaaagttcattactgaagta  17687800                                     <---------AHL20(2)                                 --------->ATHB51            --------->At4g35610                   <-                                 --------->AHL20(2)  <---------AHL20(2)               --------->ARR14(2)                                 <---------AHL20(2)  --------->AHL20(2)               <---------ARR14(2)                                 -------->ATHB1     <---------AHL20(2)                ------->TEIL --                                <---------ATHB12 --------->AHL20(2)                  <---------CCA1(2)                       <---------ANAC58          <---------AHL20(2)        <---------DAG2          <-                       <---------ANAC58         <---------AHL20(2)         <----------DOF2         <-                      ---------->ID1--------->AHL20(2)       <---------At4g35610<-----------GT1    --                  <---------DAG2<---------ATHB51<---------AHL20(1)        <---------ANAC58      -----                  <----------DOF2<--------HAHB4 --------->AHL20(1)        <---------ANAC58      -----               <---------YAB1   --------->ICU4  --------->AHL20(2)      <-----------GT1      --------   ccatatttcaaatacttatgctttttcgtttccaattatttaatatgaaatttatttattttcatctaacatttttgctttttttctgaatcttctaata  17687900                                                               <-------GAMYB                                                              <------MYB46(1)                                                              <------MYB83    <---------ANAC46                                ---------->DOF2 --------ICU4              --------->AHL20(2)      <---------AHL20(2) ------->AHL20(1)        --------->AHL20(2)   --------->AHL20(2) --------ARR11(3)        --------->AHL20(1)   <---------ARR11(3) --------AHL20(1)       --------->YAB1        --------->AHL20(1)        <---------AHL20(2) ------->ARR11(3)     --------->AHL20(2)      <---------AHL20(1) >>>>>>>>>GT-1 ---->YAB1      --------->GLK1(2)   <---------GLK1(1)         <---------MYB46(3)  <---------AHL20(2) ---->AHL20(2) <---------GLK1(2)    --------->GLK1(1)         ----------->GT1     --------->AHL20(2) ->YAB1 --------->AHL20(2) --------->YAB1------>ZmHOX2a(1)   <---------AtMYB61    <---------YAB1   atattttcgtttaaatagaatctaaaaaataatatttgaaatcctctatatattaaaagagggatggttaatatttcattctatattattaggctactat  17688000  Previous    Next  AGI:  At5g43910.1    Description:  pfkB-type carbohydrate kinase family protein. similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G28706.3); similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G28706.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40522.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611); contains InterPro domain Ribokinase; (InterPro:IPR002139) Range:  from: 17684634    to: 17687466    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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