Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ATHB12                                                          --------->MYB46(3)                                             <----------DOF2------>MYB46(1)                                       ----------------------->TaNAC69(2)                 --------->DAG2  ---------->DOF2 <----------DOF2                     ----------->GT1      --------->TOE2(3)         --------->AHL20(2)        <---------MYB46(2)       ---------->DOF2     ----------->GT1   <------ZmHOX2a(2)<---------At4g35610 ------>MYB83---------->DOF2      <------- --->GAMYB<---------YAB1------>ZmHOX2a(2)  <---------At4g35610<---------ICU4    --------->At5g28300 -->MYB52(1)    ---------->DOF2 <---------AHL20(2)       --------->ANAC46      ----------->GT1     --   gcagaaaacgttataagagaaagcgatcgcaaaattaaagtcttctgctttctttcttcaccaaacatttcgctaaaagaactgtaaaagtaatttcacc  17660500                                                                  --------->At4g35610                                                                 <---------ARR14(2)                                                                 --------->GLK1(2)                  ----------->HVH21                              --------->ARR14(2)                  ------->GAMYB                                 <---------GLK1(2)       <-------TEIL                --------->At4g35610                             --------->ARR14(2)    <----------ID1         <---------ANAC58                                       <---------ARR14(2)   ----------->GT1         <---------ANAC58                                      <------NtERF2  ------>NtERF2       ------>NtERF2                                          <---------RAP2.6(3)   --------->DAG2      <---------DEAR3(1)                                     --------->HSFB2a(2)    <---------------AtSPL8    --------->MYB52(1)                                       --------->RAP2.6(2)----------->HVH21 --------->MYB52(1)         ----------->GT1    ---------->DOF2--------->LBD16 --------->LBD16 <------ ----GT1<------NtERF2 ---------->DOF2      <----------ID1    --------->LBD16 <---------DEAR3(1) -------->DOF2  <---------At4g35610 --------->MYB52(1)      <---------LBD16 <---------LBD16   <------   aaaaaacgacggcgtttcaactgacaaagactgcaaaaaaacagagagacaaagaccagtctgccggaatctgcattctccggcgaaaggtacaaacttt  17660600                       ---------->DOF2                 --------->ANAC58                                                   --------->ARR14(2)               --------->MYB52(1)                                                   --------->GLK1(2)               <-----------GT1                                                     <---------GLK1(2)     <---------GLK1(2)<---------ATHB12                                           --------->LBD16    <------NtERF2--------->ANAC46                                                <---------RAP2.6(3)   --------->LBD16    --------->ICU4      <----------ID1                        <---------ANAC46  --------->LBD16--------->ANAC58         ------->GAMYB                ----------->RAV1(2) <---------LBD16<---------TOE2(3)       >>>>>>>>>MYB98           --------->CCA1(2)<------NtERF2  ---- ----DOF2    <---------WOX13(1)        --------->MYB52(1)     ----------->GT1  <---------LBD16   ---- ---DAG2  <---------YAB1           --------->ZAT6           ---------->DOF2--------->ALFIN1    <-----   atcgccggaattttgattaacgcaataaagaaatgtaacagtaacggacaaatacagtaagagaaagataaacacctgtgtgccggaatctacatactcc  17660700                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                               <-----                                                                                              -------                                                                                             --------                                                                                            <--------                                                                                            ---------                                                       <---------HSFC1(2)                  <---------RAP2.3(1)                                                       --------->HSFB2a(1)                 ------>NtERF2                                                       <---------HSFB2a(1)                <---------DEAR3(1)                        <-----------GT1                --------->HSFC1(2)              <-----------RAV1(1)             <---------MYB52(1)            <---------DAG2                            <----------DOF2         --------->At4g35610               <----------DOF2                         <---------HSFC1(2)         <---------At4g35610     <---------YAB1      <------NtERF2                 --------->HSFC1(2) ----->LBD16 <------NtERF2      --------->AHL20(2)  --------->LBD16        <---------TOE2(3)<------NtERF2 ------->GT1--------->LBD16     <---------AHL20(2) --------->DEAR3(1)     --------->DAG2  --------->ETT(2) ----LBD16<---------LBD16      --------->AHL20(2) <---------LBD16        ---------->DOF2<-----------HVH21   ggttaaaattcagccggaagttcaatttacaaattaaaatagaagctttatcgccggagtttcgattttagaacataaaggtagaagctttgtcgccgga  17660800      <---------DOF5.7(2)    --------->DOF5.7(2)   <-------GAMYB <---------ANAC46                                                            <-----------RAV1(1) ------HSFC1(2)                                                         --------->ANAC46 ----->HSFB2a(1)                                                        --------->ANAC58 ----->HSFC1(2)                                                      --------->At1g77200 ------HSFB2a(1)                                                     --------->DEAR3(1) -NtERF2                  <----------DOF2                           --------->DEAR3(2) -->LBD16               <---------HSFC1(2)                     --------->bZIP60(1) ->DEAR3(1)             --------->HSFC1(2)                     <---------bZIP60(1) -LBD16        --------->DAG2                             ----------->GT1  *TSS --------->ETT(1)    < >ATERF1(1)   ---------->DOF2 <-----------GT1        --------->ARR11(3) --------->ANAC58            -   gtttcggttaacgagataaagttggaagcttttttcgatatagagtcaagaagaagattatggtgacaacaccgacgcaatgtcggacttgagacgcgtt  17660900                                   --------->ALFIN1                             --------->ANAC55(2)                             <-------GAMYB                             <---------ANAC55(2)                            --------->ALFIN1                             --------->ANAC58                             <---------ANAC58                             --------->ANAC58                             <---------ANAC46                            --------->SPL7                                <---------ANAC58                        <---------------AtSPL3                          <------MYB46(1)                       <-----------RAV1(2)        ---------->DOF2       <------MYB83          --------->AHL20(2)<---------LBD16     ----------->TBP        <---------AtMYB61          <---------AHL20(2)<-------TEIL        <---------AHL20(2)   <------------CBF            <--- <---------AHL20(2) --------->ANAC58          ----------->TBP        --------->ARR14(2)         <---- ---------AHL20(2)  ----------->HVH21       <-----------TBP          <---------ARR14(2)   --------->MYB52(1) -------->AHL20(2)  --------->ANAC58   ----------->HVH21            <------ZmHOX2a(1)   --------->ARR11(3)   tattaaatgcgattaattagagacgacaggtacggaagtggatgacatatataaaaggagagagaagagaggattggtgtgttgtccatagataatggag  17661000                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                        <-----------GT1        ------                                                                       <---------YAB1          <-----                                                                     <---------ICU4          --------                                                                     --------->YAB1         <--------             <---------ARR14(2)<------MYB83                         <---------YAB1          <--------HAHB4             --------->ARR14(2)<------MYB46(1)                      --------->ICU4          ---------         <---------LBD16      --------->MYB59                     <--------HAHB4            --------- --------->ARR14(2)     ------->GAMYB          <----------DOF2    --------->YAB1           <---------YAB1 --------RAV1(2)     --------->MYB52(1)   <<<<<<<<<TBF1          <---------YAB1            <---------ATHB12 -----At4g35610   --------->ANAC46     <<<<<<<<<TBF1       <---------CCA1(2)               --------->ICU4   caggttacgacttcggaactacacaacggagttaggttttcttcttcttctttctaaacgcgtctctattattattacaaggtttgtgttttaatcatta  17661100                                                             <---------ANAC58                                                             <---------ANAC46                                                             <---------ANAC58                                                           --------->ARR11(3)                       <------NtERF2                   --------->AHL20(2)  --------->ZAT6     --------->ETT(1)                  <---------AHL20(2) --------ICU4   <---------ICU4                        <---------YAB1 --------AHL20(2)    <---------ANAC46               <---------ICU4 ------->AHL20(2) <-----------RAV1(1)              <---------YAB1                      --------->YAB1 --->AHL20(2)   --------->YAB1                     --------->ICU4               --------->ATHB12 ----AHL20(2)--------->YAB1                      --------->YAB1              <---------ANAC58 ->TOE2(3)  --------->AHL20(2)                  <---------TOE2(3)            --------->ANAC55(2) -ICU4      <---------AHL20(2)               <---------WOX13(1)              <---------ANAC58 >YAB1     --------->ICU4     <---------AHL20(2)<---------YAB1             <-----------GT1          < >ATHB12<------ZmHOX2a(1)    --------->AHL20(2)<-----------GT1         ------>ZmHOX2a(1) --------->ICU4   attaatactaggaattaataatgtcggagaattttatactatgggtgattaacataattaatgtcttgtaatcctttttacttgattagtcatattgaaa  17661200                                                  <---------ICU4                                                  --------->ATHB12                                                 <---------YAB1                 <-----------GT1                 --------->ICU4          ------>ZmHOX2a(1)                    --------->YAB1         --------->TOE1(3)                    <---------AHL20(2)         --------->TOE2(3)              <-----------GT1     --------->GLK1(1)                  <---------AHL20(2)                  <---------ICU4      -----     <---------GLK1(1)            <---------ANAC55(2)   <-----------GT1  --------->YAB1        <----- ---------LBD16--------->YAB1     --------->ANAC55(2)<---------ICU4     <---------YAB1        <------   tattcggaattccttaattatacgttctatttgaataagtatttacatataatgatttttaccatttgtgagttatcaaaatgactcaattctggctgtc  17661300                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                      <---------AHL20(2)                --------->AHL20(2)                                                --------->AHL20(2)                <---------AHL20(2)                                                <---------AHL20(2)           <---------ARR11(3)                     --------->AHL20(2)          <---------AHL20(2)           <---------AHL20(1)                  <---------ICU4                 --------->AHL20(2)    ----------->GT1  <-----------GT1       <---------AHL20(2)                 <---------AHL20(1) ---->ATHB12--------->AHL20(2)             --------->AHL20(2)                 --------->AHL20(1) ----YAB1  --------->ARR11(3)      <---------MYB46(3)                  --------->ZAT6 --------->AHL20(2) -----HVH21--------->AHL20(1)--------->ANAC55(2)  <---------AHL20(2) <-----------GT1  --------->YAB1   attggagggaaaaaatatttatattactcttacatatttgttgatttaaaaattatatatagtcaaactcttaactctattttattaattaaaattttta  17661400  Previous    Next  AGI:  At5g43880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81514.1); contains domain PTHR21726:SF6 (PTHR21726:SF6); contains domain PTHR21726 (PTHR21726) Range:  from: 17657045    to: 17660875    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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