Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------------->AGL15                                                      <---------------AGL15                                                     ----------------->AGL3                                                     ----------------->AGL2                                                     <-----------------AGL3                                                     ----------------->AG                            --------->AHL20(2)    <-----------GT1                            --------->YAB1    --------->AHL20(1)                            <---------AHL20(2)<---------AHL20(1)              <-----------GT1 ---------->DOF2 <---------AHL20(2) ----->AHL20(2)          --------->YAB1       --------->AHL20(2) ------AHL20(2)         <---------YAB1    <---------AHL20(2)                                    <---- -DOF2       --------->AHL20(2)          --------->AHL20(2)  ----------->GT1       ----------->GT1 --   taaatatagagaaatttaactagactataataaaaagacttcataaaatttattacccaaaattagaaaaaatcaggtttcaatactgaaaatagactat  17647300              >>>>>>>>>ARR2                                                                    ------              >>>>>>>>>ARR1                          <----------DOF2                        ---------        <---------DAG2                        <---------AHL20(2)                  --------->AHL20(1) --------->ARR11(3)                         --------->ANAC58                      --------->ARR11(3) --------->ARR14(2)                         --------->ANAC58                      <---------ARR11(3) <---------ARR14(2)                         --------->ANAC55(2)                   <---------AHL20(1) -----YAB1   --------->ATHB12           --------->ANAC46     <---------AHL20(2)--------->AHL20(2) ----->TEIL <---------YAB1        --------->AtLEC2  <------------------------ANAC81--------->AHL20(2)   gaatatatggccttatgattgtagttgttatattccatgcacacataagtaatttctttctatttgatttgttttttaaaaaaaaatatttagaagttta  17647400                                                                                                   --                                                                                                   <-                                                                                               ------      --------->ARR11(3)                   --------->AHL20(2)             ------->GAMYB      <-------      <---------ARR11(3)     <----------ARF1                             --------->MYB46(3)  --------  ---------->DOF2          ----------->HVH21                            <---------At4g35610 <-------- <---------AHL20(2)    --------->CCA1(2)   <---------AHL20(2)  --------->GLK1(2)          --------->ARR14(2) --->AHL20(2)   <---------AHL20(2)       --------->AHL20(2)   <---------GLK1(2)           <---------ARR11(3) -->GT1       <---------AHL20(2)  ----------->GT1 <----------DOF2 <----------DOF2         --------->ARR11(3)   aatttaaaggtcttatattttttagagatgggacacaagttaaatttatattctttagaaaatagattcttttcaacagacgtttaatccaatatctaca  17647500                     -------->P                     ------>MYB46(1)                     ------>MYB83                    --------->MYB55(1)                   <---------MYB111(1)                   --------->MYB46(3)                   <---------AHL20(2)           <---------ICU4          --------->ANAC55(2) <---------AHL20(1)           <--------HAHB4    --------->AHL20(2)        <---------AHL20(2)           --------->YAB1    --------->YAB1           --------->ICU4          <---------YAB1    <---------ATHB12     --------->ANAC58         <-----------GT1    <---------ATHB51     --------->ANAC58     <---------ARR11(3)------->GAMYB             --------->ANAC55(2)     --------->ARR11(3)--------->TOE2(3)     --------->YAB1 ------->HSFB2a(2) <---------MYB55(2)       >>>>>>>>>MYB98 --------HSFB2a(2) --------->DEAR3(1)      <-----------GT1         <------------------------ANAC81 --->REM1(1)       --------->AtMYB61     <---------AHL20(2)       <---------AHL20(2) --------AGL15     <---------MYB111(2)   --------->AHL20(2)<-----------GT1           <----------DOF2 ------->AGL15     <---------MYB46(2)<---------AHL20(2)--------->AHL20(2)        --------->ZAT18 ---------AGL2  <-----------GT1    --------->ANAC46<---------AHL20(2)            <---------ZAT18   tctggaagatttatcattacaccaaccccaataatataagtaatttaacataagtaatttttttctatttgattttgtttatgtgctctttaaaattaac  17647600                                                                               ----------->GT1                                                                             ---------->DOF2                                                                      ------>MYB46(1)                                                                      ------>MYB83                                                                      ------------------------>ANAC81                                                                    --------->MYB46(3)                                                                    --------->AtMYB61                                                                    <---------MYB46(2)                                                                    <---------MYB111(2)                                     --------->ARR11(3)             <---------MYB55(2)                                     <---------ARR11(3)             <---------MYB111(1)                                    --------->RVE1(1)              --------->ANAC58                                    --------->CCA1(1)              --------->ANAC46                                  --------->AHL20(2)               --------->ANAC58                                  <---------ICU4                  ------>MYB83--------->DAG2         ------->GAMYB         --------->YAB1                     ------>MYB46(1)        --------->MYB46(3)   --------->AHL20(2)                  --------->ANAC46       <---------At4g35610 <----------DOF2                      --------->MYB46(3)       ----------->GT1 <---------ARR11(3)     <-----------GT1--------->ZAT6          --------->DEAR3(2)      ---------->DOF2 --------->ARR11(3) <---------YAB1--------->YAB1              ------->TEIL   *TSS ---------->DOF2   caagatttcaacggccatacttcttataacttttaataatatctctactcacctcattctcatgaacccaccaaacaaaaaaagtaaagaaaagaaaaac  17647700                                          <----------DOF2                                      --------->ANAC58                                   --------->ARR14(2)                                   <---------ARR14(2)                                   <---------ICU4                                 --------->ANAC58                            --------->TOE2(3)            --------->AHL20(2)   --------->ANAC58                            --------->TOE2(2)    <----------ID1        --------------->AGL15                              --------->TOE1(2)  <---------------AtSPL8  <---------------AGL15    ----------->GT1           --------->TOE1(3)   ---- ---------->DOF2     ------>ZmHOX2a(1)--------->ANAC58            <---------CCA1(2)  --------->YAB1   taataaagaacaaaaaaaatgtcctcttcttcatcaagaaacgcctttgaagatggcaaatacaaatcaaatctcttaaccttggactcatcatctcgtt  17647800                                                               <---------DREB2C(2)                                                               <---------DEAR3(1)                                                              <---------LBD16                                                             ------>NtERF2                                                            --------->ANAC58                                                           --------->SPL7                                                          <---------ATERF1(1)                                                        <------NtERF2                                                    <------MYB46(1)                                              <---------ZAT2--------->ANAC46                                     --------->LBD16<------MYB83<---------DEAR3(2)                                    --------->ANAC46<---------MYB46(3)                                   <---------LBD16  --------->MYB52(2)                                  <---------ATERF1(1) <---------RAP2.6(2)                                 --------->ARR14(2)<---------AtMYB61                                 <---------ARR14(2)--------->MYB55(2)                               <-----------HVH21   <---------MYB46(3)                  --------->ALFIN1                            <---------At5g28300 <---------MYB46(3)                     <---------AtMYB61                         <----------DOF2      <---------At4g35610                      <---------DEAR3(1)                      <---------ARR11(3)      --------->ZAT2--------->ANAC58          <---------MYB52(1)                   <---------HSFB2a(2)        --------->At4g35610 --------->ALFIN1 <---------LBD16                   --------->HSFB2a(2)  ---------->DOF2<---------MYB46(3)  <------ZmHOX2a(1)       --            --------->DEAR3(1)--------->DEAR3(1)<-----------RAV1(1)<---------MYB46(3)--------->LBD16 ----->At4g35610   --------->HSFC1(1)------>NtERF2<---------MYB52(1)   <------ZmHOX2a(1)<---------MYB46(3)   gctgcaaaataacaccgtcttctagagcttcaccgtctccgccaaagcagctgttggtggctacgccggtggaggaaggagattatccggtggtgatgct  17647900                                              <---------ANAC46                                              <---------ANAC58                                              <---------ANAC58                                         <-----------RAV1(1)                                    <---------ZAT2                     ------>ZmHOX2a(1)                                    --------->At4g35610               --------->TOE2(3)<-------TEIL       <-----------GT1   ------>ZmHOX2a(1)    <---------AtLEC2 <---------ANAC58   <-----------RAV1(2) ---->ZmHOX2a(1)  --------->REM1(1) <---------At4g35610        <---------ANAC58  ------>ZmHOX2a(1)   cctccatggttaccttctctacaactccttctattctcagcttatgttgcatgtctcttctcatggcttcatcctcatcgctcctcaggttcaatttcaa  17648000           --------->TOE2(3)     --------->YAB1                                                                                 <     <--------HAHB4                                                                             <----     --------->ATHB12                                                                         <------     <---------ICU4                                                                         ---------     -------->ATHB1                                                                         <--------    --------->ICU4<---------LBD16                               <---------TOE1(2)          --------->ICU4    <---------ATHB12     --------->ICU4                        ------>ZmHOX2a(1)           <---------AHL20(2)  --------->WOX13(1) <------ZmHOX2a(1)   --------->GLK1(2)<---------GLK1(2)           ----------->GT1   tttccaatcattacattagttcaggaactaattagccactgaaattcttgtttagttttagattcctatgtgtattagtaatttagtatagaaattattt  17648100      --------->WRKY18(1)                                   <---------TOE2(3)    ----------->GT1                                      <---------YAB1 ---------LBD16                                         <---------AHL20(2) -----AHL20(2)                     ----------->GT1    <---------------AGL15      ----------->GT1 ---YAB1                         --------->ICU4<---------YAB1      ----------->GT1      >>>>>>>>>>>>> >AHL20(2)                    --------->AHL20(2)      <---------YAB1     --------->MYB52(1) -AHL20(2)     <---------ZAT6 <---------AHL20(2)     <-----------------AGL3--------->YAB1   tttggggggtcaaactagtgtatagtttttgtttaattagtaaaatgttatgagttatttttatggaaatggtactatcggaattgttaaatccagtgta  17648200  Previous    Next  AGI:  At5g43860.1    Description:  ATCLH2 (Chlorophyll-chlorophyllido hydrolase 2). Identical to Chlorophyllase-2, chloroplast precursor (CLH2) [Arabidopsis Thaliana] (GB:Q9M7I7); similar to ATCLH1 (CORONATINE-INDUCED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G19670.1); similar to chlorophyllase 2 [Brassica oleracea] (GB:AAN51934.1); contains InterPro domain Chlorophyllase, chloroplast (InterPro:IPR017395); contains InterPro domain Chlorophyllase; (InterPro:IPR010821) Range:  from: 17647677    to: 17649539    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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