Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->LBD16                               --------->GLK1(2)                             <---------HSFB2a(1)                             --------->HSFB2a(1)                             --------->HSFC1(2)                 <------ZmHOX2a(2)<---------HSFB2a(2)                        --------->ARR11(3)      --------->TOE2(3)      <---------HSFC1(2)                              --------->GLK1(2)   ----------->RAV1(1)<---------ATHB12                                       <---------ARR11(3) ------ARR11(3) <-----------ARR10 <---------HSFC1(1)                    <-------TEIL ----->ARR11(3)--------->At4g35610--------->HSFB2a(2)                --------->GLK1(1)         ------   atatccaacattatcgcagatcaaatcaagaagattccagaaataaacaaaatcgaaaccgaaaacatcggagattcaaaatctactacttagaaatcaa  17641200                          --------->YAB1                        --------->ANAC58                        --------->ANAC58                     ================================HOX2a_HOX2a           <------ZmHOX2a(2)                    <---------ARR11(3)                                    <---------ARR14(2)        -               <XXXXXXXXXXXXXXXXXXXXMIR862-3P                             --------->ARR14(2)      ---           --------->CCA1(2)                                    ==================HOX2a_HOX2a  ------          --------->ARR11(1)       ---------->DOF2          --------->TOE1(2)  <------ZmHOX2a(1) <---      ---------->DOF2<------ZmHOX2a(2)        ====================================HOX2a_HOX2a  ------  <----------ID1    --------->ARR11(3)        <------ZmHOX2a(1) <------ZmHOX2a(1)    <xxxxxxxxxxxxxxx ---->DOF2<---------ARR11(3)  <---------AHL20(2)           -------->ZAP1 <------ZmHOX2a(1)     ------   agaaacaacaaagatttgactagatcaagcatataatcaaagagaagaggacttgaaattgacctaggaacacgaggatcaggattatcaagagagtaag  17641300                --------->LBD16              ------>ZmHOX2a(2)             --------->CCA1(2)             <------ZmHOX2a(2)             --------->ARR14(1)            --------->ARR14(2)            --------->ARR11(1)            <---------ARR11(3)          ----------->ARR10                  --------->ANAC58       --------->LBD16                       --------->ANAC46      <---------HSFB2a(2)               --------->ARR14(2)      --------->HSFB2a(2)          --------->ALFIN1   --------->ARR14(2)      ----------->TGA1  --------->ANAC55(2)       <-------TEIL   <---------ARR14(2)      ----------->HVH21 --------->ANAC55(1)     <---------ARR11(3) -------->MYB46(3)        <-----------HVH21  --------->ANAC58        --------->AGP1             <---- -------->RAV1(1)        <---------ANAC58   <---------LBD16          --------->ARR11(3)  <---------At4g35610 --->ANAC58 <---------ARR14(2)    <---------ZAT2                    --------->GLK1(1) ---------->DOF2 -------ID1 --------->ARR11(3)    --------->ZAT2                    <---------GLK1(1) =============== --->ANAC58<---------HSFB2a(1)<---------ANAC46                 <---------ANAC58     --------->ANAC46< xxxxxxxxxxsmallRNA(le3) <---------ANAC58  --------->MYB52(1)  <---------ANAC58   --------->ANAC46  = --->ANAC46<---------GLK1(1)--------->MYB52(1)          --------->ICU4<------ZmHOX2a(2)  --------->At4g35610   caacaaatccagaagatccgaagttaagcgtgacggagttgggattcacggaagcgaaatgagtagcgagagatccatctttcaacgcgaaagcagactc  17641400                                                                                              <------                                                                                             --------       --------->ZAT14                                                                ----------->GT1       <---------ZAT14                        --------->HSFB2a(2)                     --------->LBD16       --------->ZAT18                 --------->DEAR3(1)                            <---------HSFB2a(2)       <---------ZAT18               ------>NtERF2                                   --------->HSFB2a(2)    --------->ALFIN1                <---------ALFIN1                                <---------LBD16 -------RAV1(2)              <----------TaMYB80                                    <---------LBD16 =========bZIP_DOF   <-----------HVH21<------NtERF2                        --------->ICU4    <------- ---------TGA1a ---------->DOF2  --------->ANAC46                          <---------YAB1    -------- ==========================bZIP_DOF --------->DEAR3(1)                   --------->YAB1      <-------   agacgagtgtggactctgtaaagcttcagggctattcgccaccgtcttctcaaacacagcgagcatttttctcagtgatgattttctcgggaaaataaaa  17641500                                                                                              -------                                                                                              -------                                                                                              <------                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                          <---------GLK1(1)                                                                                          --------->GLK1(1)                                                                                          --------->CCA1(2)         ----------->GT1                       --------->DAG2                             <----------TaMYB80    ---------->DOF2                       <------ZmHOX2a(1)                              <---------ARR14(2) ---AHL20(2)                             ----------->GT1                                 --------->ARR14(2) ->AHL20(1)                         --------->YAB1            --------->LBD16  --------->GLK1(2) --AHL20(1)              --------->MYB52(1)   ---------->DOF2<---------LBD16  <---------GLK1(2)    -- ->AHL20(2)           <---------At4g35610<----------ID1 *TSS<---------LBD16<---------TOE2(3) <-------TEIL --AHL20(2)   --------->AHL20(2)   --------->ICU4      ---------->DOF2   ---------->DOF2<------ZmHOX2a(1)   tttgcagaaagaagaaaaaaatggagcaaacgagaaaatgatgaggaaaaaagtgaagaaagaccgggaaggctataaaggaatcttgtaggatatacgt  17641600                                <---------ANAC58                                <---------ANAC46                                --------->bZIP60(1)                                <---------ANAC58                            ------->MYC4                            -------->ABF1                            <-------MYC4                            <-------MYC2                            ------->MYC3                            <-------MYC3                           <---------O2                           --------->ANAC55(2)                               ========================                           <---------TGA1a                                   <---------------AGL15                           --------->TGA1a                                   --------------->AGL15         <---------At5g28300------->MYC2                                    <-----------------AGL1         <-----------GT1   --------->O2                                   <-----------GT1        <-----------GT1    <---------ANAC55(2)                        <----------DOF2         -------  <---------YAB1           <--------ABF1                            ---------->ID1         --------->YAB1 -->ANAC55(2)       <------------CBF                               <-----------GT1         --------->AHL20(2) -->ANAC46        <---------MYB52(1)         <------ZmHOX2a(1)    <<<<<<<<<<GT-3b   ----------->GT1 ---ANAC55(2)    --------->TOE2(3)<---------YAB1              <---------CCA1(1)    <---------TOE2(3) ------->ICU4 <---------ALFIN1  <---------bZIP60(1)           <---------RVE1(1)  <---------ATHB12 ---   gattactattttacccctacgttattgacacgtgtcgtgattcaagaggataagaaagttttggatatttttcttttttctcaatgaggttaataaaaaa  17641700                             --------->ANAC58                       --------------->AGL15                       <----------DOF2                       <---------------AGL15                       --------->TOE2(3)                      <-----------------AGL3                    <---------ARR11(3)                    <---------ARR11(1)                    --------->ARR11(3)                 --------->YAB1                 <---------ICU4    --------->YAB1 <---------AHL20(2)<---------CCA1(2) <---------YAB1             --------->DAG2 ======================================MADS_MADS            --------->YAB1            ----------->GT1 --->DOF2 ----------->GT1    --------->ANAC58              <---------YAB1             --------->YAB1 -------->GT1 --------->YAB1 --------->ANAC46       <-----------GT1          ----------->GT1      ---   gagttaattagatggataatcatatctttaaacggaatcacaattatctgattttaaacttttgataaggcaatgtagattgtaaaaatagtaatttgtt  17641800                                                                                             --------                                                                                           <---------ANAC58                                                                                           --------->O2                                                                                           <---------O2                          ----------->GT1                        --------->YAB1 <---------AHL20(2)           --------->ANAC58                                 <---------AHL20(2) --------->AHL20(2)           --------->ANAC58                          <-----------GT1           <---------AHL20(2)           --------->ANAC55(2)                       <---------ICU4     ----------->GT1    <---------ANAC46      --------->YAB1   <------ZmHOX2a(1)       ----------->GT1  <---------YAB1<---------------AGL15 -------->GT1    <---------AHL20(2)   --------->ICU4--------->ICU4    ---------->DOF2      <---------ANAC58   tggataaatagtaacgcaatttataggaatgttactagtaatttttggaatgtaataactatttttatgataaaaagtttataaatttagtagacgtgta  17641900                         --------->ATHB12                         <---------ICU4                   <-----------GT1             <---------ANAC58             <---------ANAC46             ----------->GT1             --------->ANAC58             --------->ANAC55(2)             <---------ANAC55(2)                        --------->YAB1  --------->CCA1(2)             <---------ANAC55(1)                     <---------ZAT6    >>>>>>>>>GATA-1             --------->ANAC46                        ----------->GT1 ----------->GT1             --------->ANAC55(1)            --------->ATHB51     <---------AHL20(2)             --------->ANAC58               --------->ATHB12--------->AHL20(1)                   ----             <---------ANAC58              <---------AHL20(2)   --------->AHL20(2)         <---------ARR14(2)   <------ZmHOX2a(1)    <-------TEIL       <---------YAB1  --------->AHL20(2)              --------->ARR14(2) --->GT1   <-----------GT1              <---------ARR11(3) --------->YAB1                 <---------CCA1(2)   aaataggacttaattacgtaattacattcattgcaaatgctggatattattggtagtgtaataatattaaatagataaacgattttgaaaacatatctga  17642000                                         --------->YAB1                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC58                                   <-------TEIL               <---------TOE2(3)<------MYB46(1)         --------->AHL20(2)     <---------ANAC58         <---------AHL20(2)     <------MYB83                 ---------->DOF2         <---------AHL20(1)     <---------ANAC58       --------->ATHB12         --------->AHL20(1)    --------->MYB46(2)      <---------AHL20(2)  <-----------GT1              --------->MYB59        --------->ICU4---------->ID1 ------>DOF2<---------YAB1     --------->MYB111(1)    --------->AHL20(2)                    ------>ZmHOX2a(1)   aaagtatccattttattatcgtttgtgtaatattaggtgcgtttgataatgcagtatttattagaaagttgtcgcttaattagagaaaattttcctaaga  17642100  Previous    Next  AGI:  At5g43830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22850.1); similar to aluminum-induced protein-like protein [Thellungiella halophila] (GB:AAM19711.1); contains domain G3DSA:3.60.20.10 (G3DSA:3.60.20.10); contains domain SSF56235 (SSF56235) Range:  from: 17639563    to: 17641556    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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