Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ARR14(2)       <------NtERF2                       <-----------HVH21               --------->ANAC58 ---------->DOF2                 --------->ICU4                   <---------ICU4                    < -------->MYB52(1)        ----------->RAV1(2)                    --------->ICU4<---------ARR14(2) <-- --------->DOF2       --------->ANAC58    <----------DOF2       --------->ANAC58                  --- ------>AtMYB61       --------->ANAC58 ------->TEIL  <-----------GT1       --------->ANAC58      ---- ----ALFIN1 <----------DOF2 ------>ZmHOX2a(1)       <-------TEIL--------->ANAC58               <-----   cctaaaggcagagactttaaactcaagctcctgcaaaaatgaaactttcagagattcacaacttgtaagcattagatacccaatccgactaaatgagcgt  17591800             <---------At4g35610           <-----------GT1      <---------ICU4      --------->YAB1      <--------HAHB4     <---------ATHB12 ---------WOX13(1) -------MYB46(3)                                              <-------TEIL                       ---- ------>ATHB12            ----------------->AGL2            <---------GLK1(2)                   <---- ----->WRKY38(1)  <---------YAB1                            --------->ARR14(2)        <---------YAB1 --GAMYB<---------YAB1    ----------------->AGL3            <---------ARR14(2) >>>>>>>>>>>>>>>>>LFY X   tgattgaatcattttagcttattgtagtcccaaattcagttcgaacataaacccaaaacacagattcagagcttccattagaaccattgtcatttctaat  17591900                 <---------At4g35610                                                           ------                 <---------ZAT2                          <---------At4g35610       --------->ARR11(3)                 --------->At4g35610                  <-------TEIL                 --------->GLK1(2)         <-----------GT1                             <----------DOF2               --------->ARR14(3)       --------->AHL20(2)                          --------->At4g35610             <---------ARR11(3) ----->YAB1      --------->ZAT2                    <---------At4g35610             <---------ARR14(3) -----ATHB12    <-----------RAV1(1)            ------->TEIL             --------->AtMYB61   --------- XXXXXXXXXXXXXXXXXXXX>MIR402              --------->YAB1 --------->At4g35610       --------->ARR14(2)   caaaacccattaaacactctgctgcattttatacactaatacaaacatgaatcagcttcatcggaaaacagaaaccaaaacccaaaatcttcgacaatca  17592000                                                --------->ANAC58                                    ------>MYB46(1)                                    ------>MYB83--------->ANAC46                                   <---------ALFIN1                                   --------->ANAC46                                  --------->DEAR3(1)                                  <---------MYB55(2)                                 --------->ANAC46                                 --------->ANAC58                                 --------->ANAC58                               <---------ALFIN1 --------->ANAC58               <---------At4g35610<---------MYB111(2)               --------->At4g35610--------->MYB46(3)                        <---------YAB1       <---------ICU4      <-----------HVH21--------->ANAC58          --------->AHL20(2)      --------->ICU4<---------WOX13(1)  <---------YAB1<----------DOF2 <---------AHL20(2) --->YAB1<---------YAB1   --------->ANAC58  --------->ANAC58         --------->AHL20(2)----------->GT1 >WOX13(1)--------->YAB1  --------->ANAC58---------->DOF2   --------->YAB1--------->YAB1    ---------   caaatttcattatcatcaactgatggataagtcacacccaccatgaaagcaagcaacttttatcagaaattttaaattataagaaaaacctgttaaaaga  17592100                                                                           <--------HAHB4                                                                        --------->AtMYB61                                                                       --------->MYB46(3)                                                   --------->ANAC58   ------>NtERF2                                                   --------->ANAC58  --------->RAP2.6(2)                                                   --------->ANAC46 --------->MYB46(3)                                        --------->MYB52(1) --------->At4g35610  --------->GLK1(2)        <---------TOE1(3) <---------ANAC58    --------->MYB46(3)  <---------ARR14(2)       <---------TOE2(3) <---------ANAC58------->GAMYB<---------YAB1   ------>ZmHOX2a(1) ->DOF2           <---------YAB1      --------->MYB46(3)  --------->MYB52(1)    <-----------GT1   *TSS   cgcgaatcgatctagtcttgaagattgtgaaggtagtagaaccaatggcttccaagtaaacaactgaacagccaccatcatttatctcttctcctcgctc  17592200                     <-----------TBP                        <---------DAG2                         <-                     --------->AHL20(2)                     <----------DOF2                        --                    --------->AHL20(1)  <-----------GT1     <---------------AGL15                ----                    <---------AHL20(1)----------------------->TaNAC69(2)              --------->AHL20(2)              <----------DOF2         <----------DOF2    <-----------GT1              <---------YAB1-            --------->At4g35610      <---------ICU4 <---------DAG2                    <---------AHL20(2)            --------->LBD16        <---------ARR11(3)<----------DOF2    --------->ANAC58       ------          <---------LBD16          --------->ARR11(3)<---------DAG2   ---------->DOF2--------->AHL20(2)        <-----------GT1<---------AHL20(2)         ------->TEIL   <---------LBD16     <---------AHL20(2) <----------DOF2   --------->AHL20(2)------>ZmHOX2a(2)   ---------->ID1 --------->ANAC58     <-------   tctctttgtttctccgcttaaatatatatatgaggctgatctttacattttgcacctttttccttttcgagggaaagaaatgtgtattttaattagagtc  17592300      <---------DAG2                                                                        ---------  <---------YAB1                                                                         --------->LBD16 <-----------GT1                                                                       <---------LBD16 --------ATHB12                                                                       <---------At5g28300 ------->ICU4                                                                        <-----------GT1 ----->WOX13(1)                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -------->YAB1                                  <---------MYB52(1)                <---------ICU4 ------>CBF                                    <----------DOF2    <-------TEIL   --------->ICU4 --ZAT6     ---------->ID1      --------------->AtSPL8--------->MYB59         ------>ZmHOX2a(1)   aattatcaatttttgttgttaatgacttcaatgttttggaccatattgcctttagttaagtagttaagttcatttgactcctaatttttaccggagttcg  17592400                                                                                                -----                                                                                               ------                                            ------>ZmHOX2a(2)                                  <-----                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             -------                                          <---------AGP1                                      -------                                          --------->ARR14(2)                                  <------                                          <---------ARR14(2)     <---------REM1(1)            -------                                          <xxxxxxxxxxxxxxxxsmallRNA(i)                        <------                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     -------                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                       <------                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)----------->GT1           <------                             <---------GLK1(2)                  --------->ARR11(3)          ---------                             --------->ARR11(3)             ---------->DOF2                <---------GLK1(2) >GLK1(1)            --------->ANAC46   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->AHL20(2)<-----   attctactaaatcgcattattctgcgtaatagatactgactatagatcgggccttatacatccaaagatgtagaaaaaaaaaaatgaagtagagattcct  17592500       --------->ANAC58       --------->ANAC58   <-----------HVH21  <------MYB83  <------MYB46(1) --------->MYB59 ->ZmHOX2a(1) --------->AGL15 ----------AGL15 ---------->AGL2 ---------->AGL1 -----------AG ---------->AG -----------AGL3                                                                                   <- ---------->AGL3                           <-----------HVH21                                       -- -----------AGL1                    <----------DOF2    <--------HAHB4                   --------->GLK1(1) -----------AGL2                   --------->TOE2(3)  <------ZmHOX2a(2)          --------->At4g35610 >GLK1(2)--------->ANAC46     <---------MYB52(2)     <---------ARR11(3)        --------->ANAC46    <- ----MYB59 ---------->DOF2   ----------------------->TaNAC69(2)   <---------ZAT18<---------At4g35610   aatttggtcacacaaaagcagtactaatgcaaacaaacctttatatgtcactctggatcattaagttgctcacttagttagacagcacaaatatccaatt  17592600                                 <---------DAG2                 --------->ANAC46                                 <----------DOF2                --------->ANAC58              <------                              <-----------GT1                   --------->ANAC58              <------                          --------->AHL20(2)            --------->AHL20(2)                  <-------- --------ANAC55(2)       <---------AHL20(1)            --------->AHL20(1)               --------->ARR11(3) ------->ANAC55(2)       --------->AHL20(1)            <---------AHL20(1)    --------->AHL20(2) --------ANAC46         --------->AHL20(2)            --------->AHL20(2) <---------ZAT6 <---------ARR11(3)   cacgtataatatgaaatagttatcaaatatatatacttttttttttgtcatatcaaatatatatacaagaaactagacttaaaatatagagattttactt  17592700  Previous    Next  AGI:  At5g43745.1    Description:  phosphotransferase-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71282.1); similar to hypothetical protein OsI_009890 [Oryza sativa (indica cultivar-group)] (GB:EAY88657.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN06856.1); contains InterPro domain Protein of unknown function DUF1012 (InterPro:IPR010420) Range:  from: 17586374    to: 17592198    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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