Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->At4g35610                                                                                           <---------At4g35610                                                                                     --------->GLK1(2)                                                                                   <---------RVE1(1) ----->ANAC58                                                 <---------ANAC58    <---------ARR11(3) ----->ANAC58                          <---------YAB1         <---------ANAC58    --------->ARR11(3) ---->DOF2                        --------->YAB1          <----------DOF2         --------->ARR14(2) --YAB1  ----------->GT1         <---------ATHB12       ---------->ID1          ----------->ARR10  <-   agccatatagaatgtgataaacaagtagagcatcaatggttatgaacagtttttttttgtctttccttgttagattaataccgagatattctgtgctgaa  17581600                                                          ----------->HVH21                                                        --------->O2                                                        --------->ANAC46                                                        --------->ZAT2                                 <-----------GT1        ----------->RAV1(2)                      <---------ZAT6    --------->ZAT14 --------->At4g35610            ---------->DOF2    <---------WOX13(1)     <---------ALFIN1             --------->YAB1    <---------------AtSPL8   --------->ATHB12      <-----------GT1       --------->ATHB12      <----- --------REM1(1)--------->ARR11(3)      <---------ZAT14 <---------At4g35610       <---------YAB1    -   gttgtagtagtacataaagaaattgtgttattgatttactactgaactaagtttctccacctgacttaataagcttgatttgttatgatataacatataa  17581700                                                    <---------ARR14(2)                                                --------->YAB1                                                -------->HAHB4                                               <---------YAB1                                               --------->ICU4                                             -------->HAHB4                                             --------->YAB1                      --------->WOX13(1)                                             <---------ICU4                    <---------ATHB12                                            --------->ICU4                    ------>MYB46(1)                                           <---------AHL20(2)                 ------>MYB83                                          --------->YAB1                    <---------MYB46(2)                                         <---------YAB1                     --------->AtMYB61                                    --------->ARR14(2)                      <---------MYB111(1)                                    ------->TEIL<---------ICU4              --------->MYB46(3)                                    <---------ARR11(1)     <--------P      --------->ANAC58    <-----                                    <---------ARR14(2)  ------>ZmHOX2a(1)  --------->ANAC58    ------                                   <---------ARR14(1) ------>ZmHOX2a(2)    --------->ANAC46   -------    <---------AtMYB61              <---------CCA1(2)--------->ARR11(3)   <-----------GT1      ------- ------GT1<---------ANAC46       <---------ANAC58   <---------ARR11(3)   --------->ANAC46  --------->WOX13(1) -------->ZAT2                   <---------ANAC58 <---------YAB1    <----------DOF2<---------ATHB12 -   ctagctgtggttttgtatatatgaattggttattgtcgtatctataataatgatgatcctggttgctctgcttttacaccaaacaatcagtttcaattaa  17581800                 <---------RVE1(1)       <----------DOF2       <---------DAG2                    --------->ANAC58 ----AHL20(2)    <---------CCA1(1)       --------->LBD16                    <---------ARR11(3) --->AHL20(2)   <---------AHL20(1)       ----------->GT1                  ----------->ARR10       --- -->AHL20(2)    --------->ARR11(3) <---------At5g28300              --------->DAG2         --------->GLK1(1) -->YAB1        <---------ARR11(3)<-----------GT1                  ---------->DOF2         <---------GLK1(1) -------->AHL20(2)   <---------AHL20(2)  --------->ANAC58    <----------ID1 --------->ARR11(3)    <--   aataaaacacttttacaagatatttaaaaccaaaatttacagcccgaaaaataaaaccaaaaaaaaacaaaaagagaagattttagtttgtggatatcag  17581900                                                                 *TSS                                                                 <---------ANAC58                                                                 <---------ANAC58                                                             <------------CBF                                  <---------AHL20(2)        -------->ATHB1                                  --------->AHL20(2)        --------->ATHB12                           <----------DOF2                  <---------ICU4                      -----                           --------->TOE2(3)                --------->ATHB51                    <----                     --------->ZAT6        <---------CCA1(2)<--------ATHB1                     <-----                    --------->MYB46(3)  --------->TOE2(3)  --------->ICU4                      <-----                   -------->P--------->AHL20(2)            <---------ATHB51                    <-----      <----------DOF2--------->AtMYB61 ----------->GT1     <---------YAB1             --------->MYB46(3) ------>GLK1(1) --------->At4g35610    --------->YAB1  ------------>CBF  --------->YAB1   <---------ICU4 -------GLK1(1) <---------At4g35610XXXXXXXXXXXXXXXXXXXX>MIR4243 <---------MYB46(3) <----------ID1  --   agttctgacttttcttgaagctaccactactttaaataaaatcgtaaatctcatataaacaattattggttgcagtgatattagaagaacaaacatttcg  17582000      --------->ANAC58      --------->ANAC46      --------->ANAC58                   <---------ANAC46 ---->HSFB2a(2)                --------->MYB52(2)                                                 --- -----HSFB2a(2)                --------->MYB59                                             --------->ARR14(2) ----ANAC58                  <---------MYB52(1)                                            <---------ARR14(2) ----LBD16               <--------P      <---------ANAC58                                 <---------GLK1(1) ----ANAC58           <---------ZAT6     <---------ANAC58                                 --------->GLK1(1) ------->SPL7    <-----------HVH21<---------ZAT18<---------TOE2(3) <---------YAB1         <---------CCA1(2)   ggacgaagacgaaactctatgtcagtggtaagttagttcccttccttgtttaagttttgttctatgtttatgtttccaattcttcatcttgcatatccca  17582100                                                           --------->ATHB12                                                          <---------AHL20(2)                                              --------->ARR11(3)                                              <---------ARR14(3)                                              <-----------ARR10                                              <---------ARR14(2)                --------->ARR14(2)                                              --------->ARR14(3)                <---------ARR14(2)                         <---------DAG2       --------->GLK1(2)           ------->TEIL           --------->GLK1(2)                  --------->ARR14(2)       <---------ANAC55(2)     ------ ------>GLK1(2)          <----------DOF2      <---------ARR11(3)       <---------YAB1----------->GT1   attctgtattccaattctgtattggtactttttgctcatacaattgaaaatcttcactatttcattgagtattatgtatgcaaatacttgtaaaatatag  17582200                                                          <------MYB83                                                    <---------AHL20(2)                                       <---------ANAC58   <------MYB46(1)                                       <---------ANAC58   <---------ANAC46     --------->At4g35610                          ----------->GT1           --------->AHL20(1) --------->AHL20(2)                       --------->CCA1(2)            <---------AHL20(1) <---------AHL20(2)                      <---------ARR11(3)      ----------->GT1         --------->AHL20(2) ----->GT1            --------->ARR11(3)     --------->ZAT6 <---------ANAC46   <---------At4g35610   caaaatagtttcaaatctagttgagatatagtaaaatggtttcgttaccagtaaaatatttggtgtaaacaatttaaatttagctcagaaaattggtttc  17582300                                                                                      <---------AHL20(1)                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(1)                                                                                      --------->AHL20(2)                                                                                 --------->AHL20(2)                    <---------ARR11(1)                           --------->AHL20(2)  --------->AHL20(2)                    <-----------ARR10                            <---------AHL20(2)  <---------AHL20(2)                   <---------CCA1(2)                            <---------AHL20(2)   --------->YAB1             --------->ARR14(2)      --------------------->WRI1 --------->AHL20(2)  --------->ICU4             <---------ARR14(2)     --------->ANAC55(2)     <---------YAB1     ----------->GT1            <---------GLK1(1)     <-----------GT1   --------->YAB1           ---------->DOF2<--------   atattgaagataacatatcccaaatctattcaaattttacttattttgtttcgaacataagtttgattaaattttggataaaagtaattatattatgcta  17582400                    <---------AHL20(2)                  <---------AHL20(2)                  --------->AHL20(2)                <---------AHL20(2)                --------->AHL20(2)                                                            <------              --------->AHL20(2)                                                              -------              <---------AHL20(2)                                                              -------            --------->AHL20(2)                                  <---------AHL20(2)      --------->TOE2(3)            <---------AHL20(2)                                 --------->AHL20(2)     <-------TEIL          <---------AHL20(2)                                 --------->ARR11(3)   <---------ARR11(3)          --------->AHL20(2)                    <---------AHL20(2)              --------->ANAC58        --------->AHL20(2)                      --------->AHL20(2)              --------->ANAC58 -YAB1  <---------AHL20(2) ------->TEIL    <-------TEIL      <---------ARR11(3) --------->ANAC46   tgtatgatatatatatatatatatatatgtatatcagtttacatatacatttatttgaaacaagatttatttgtttaagttcaagaaattcattaaccta  17582500  Previous    Next  AGI:  At5g43740.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein At5g43740 [Arabidopsis Thaliana] (GB:Q9FG90); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43730.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G15890.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G51480.1); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00216.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro Range:  from: 17581965    to: 17586029    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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