Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ATHB12                                 --------->YAB1                               ------>MYB83                               ------>MYB46(1)                              --------->WOX13(1)     --------->ARR11(3)                           -------->P--------->ANAC58--------->GLK1(2)                        <---------At4g35610  ------->TEIL                                  <---------YAB1                        --------->At4g35610--------->YAB1     ------>ZmHOX2a(1)      <---------YAB1                       ------->TEIL  --------->ANAC58<-----------ARR10       ---------->DOF2       <-                <---------ALFIN1<---------ATHB12     <---------ARR11(3)----------->GT1  ------->TEIL   ctcaaatactagttggacacacatgaagctaccaatcagacccaatgaaactcaaaatcttatcctccaaacacagaaaaaaagactatgaatatgtttg  17567100                                                 --------->bZIP60(1)                                                 --------->GLK1(1)                                                 <---------GLK1(1)                                              ------>ZmHOX2a(1)                                       ==============HOX2a_HOX2a                                       ------>ZmHOX2a(2)                                     <---------ARR11(3)                                     --------->ARR11(3)     ----------------->AGL3       <---------ZAT2                <-----------ARR10      --------->MYB46(3)       --------->At4g35610       =============HOX2a_HOX2a  ------->TEIL            <---------ARR11(3)       <---------At4g35610       --------->YAB1  <---------bZIP60(1)               --------->ARR11(3) ---------DOF2                   <------ZmHOX2a(1)    <---------ANAC55(2)---------->DOF2   <---------   actttagacagctagagtttcaactcaattgactaggatgatctaatcctgatatcacatgaaccacaaatagatgaaagagtaagttcttggctttaag  17567200                        ------->MYC3                       --------->YAB1                        <-------MYC3             <---------ANAC58                    <-------TEIL                 <---------ANAC58            ----------->HVH21                   <---------ICU4          ----------->GT1                      <---------YAB1                  ---------->DOF2          <---------At4g35610                  --------->ICU4          <---------ANAC58 -DOF2    --------->At4g35610    ----------->RAV1(1)-------->P         <---------ANAC58 ----------->GT1   agagagagagagaggtgacaaatgcatatggcagaccacagtacatgtaatgcttaccctacaataactcaatgcttgaacaaaagagaaaggtttttta  17567300             <---------ZAT18             <---------ZAT14             --------->ZAT18             --------->ZAT14                                                                   <-----           --------------->AtSPL8  <---------ANAC58                                         <--------           <---------------AtSPL8  <---------ANAC46                                         ---------       <-------MYC3          <---------ALFIN1                                          ---------->DOF2       ------->MYC3       --------->ANAC46       <---------ZAT14                   ---------->DOF2 <-   <---------ZAT18       -------->P<---------ANAC58          ------->TEIL ------>ZmHOX2a(1) ---------   tattctgcacatgagtgtaccatactctaccccacttccttgaattagggctacagagaaatgaatctagaccgtcctctaaaatcaaagaaagtatctt  17567400                                                                                           --------->At4g35610                                                                                      --------->ANAC46                                                                                      <---------ETT(1)                                                                                      ----------->HVH21                                                     <----------DOF2               --------->MYB52(1) -----DOF2                                        <---------ALFIN1                 -------->P -ARR11(3)             ----------->RAV1(1)   ----------->HVH21        <---------At4g35610  <---------At4g35610 >GLK1(2)           --------->PCF2       --------->ATHB12    ---------->DOF2   <-----------GT1     <- ---------DOF2     <-----------HVH21     -------->HAHB4     *TSS    <---------ANAC46 --------->MYB46(3) >ARR11(3)    ---------->DOF2           --------->ICU4    --------->TOE2(3)   --------->ZAT14<-------   tctttgtgttgaagatgaaagtgtcccacaaatgtccccaaaatgatgggacacactttgcctcaaagttgctgctactgtttactacccgacagcttta  17567500             ------>ZmHOX2a(1)                      --------->DAG2            --------->TOE2(3)                  --------------->AGL15      <----------DOF2----------->GT1          ----------------->AG ---------DOF2 ---------->DOF2              <-----------GT1<----------DOF2                         <- ---DOF2  ---------->ID1            <-----------GT1---------->DOF2    ------>ZmHOX2a(1)   ---------->DOF2   gcttttgcctttgtccttaaatcaagttaatcccattttttctaaattaccaaaaaagtgacttttcaattcctataaaacaatcttcttcacaaagcct  17567600                                                                        <----------DOF2                                              --------->ANAC46---------->DOF2                                             ------------------------>ANAC81<----------DOF2    ------                                    ------->GAMYB    --------->ANAC58 <-------TEIL >>>>>>>>>TBF1                                    --------->AtMYB61--------->ANAC58<---------ARR14(2)       ------- --------CCA1(2)<----------DOF2    --------->MYB46(3)--------->ANAC46--------->GLK1(2)   ----------->GT1   cttatctcatcaacaagtctttctctctctctagacaaccacaagaacacaaaacacacaaaaacaaagaggttctttctttgaagaagaaatggaaaaa  17567700                                                                                          ===========                                      --------->ZAT2                                      -----------                                      <---------At4g35610                                <----------ID1                                      <---------ZAT2                                   --------->ANAC58                                      --------->At4g35610                              --------->ANAC58                                   ------->GAMYB                                       --------->ANAC46                                ----------->RAV1(1)                                   --------->DAG2                             --------->ANAC46                                   <---------HSFB2a(2)                           ---------->DOF2                                      --------->HSFB2a(2)        <---------YAB1    --------->MYB52(1)                                <---------ANAC58 <---------TOE2(3)        ---------->DOF2                 ----------->HVH21 <---------ANAC46  ------- --->DAG2               --------->TOE2(3)              <---------LBD16      <---------ANAC58--------- --->DOF2--------->YAB1 --------->TOE1(3) ----------->ARR10         --------->GLK1(2)---------->DOF2   gttgatgtttatgatgagcttgttaacctaaaggcaacagagctgagattgggattaccagggacagaagaaactgtttcttgtggaaaaagcaacaaaa  17567800     ----------->RAV1(2)        <<<<<<<<<GATA-1   <-----------GT1              <<<<<<<<<GATA-4 ================RAV            <<<<<<<<<GATA-3                 ---------->DOF2 >RAV1(1)                       <<<<<<<<<GATA-2              ------>ZmHOX2a(1) --->DOF2           ---------->DOF2                    <----------DOF2 >MYB46(3) <---------At4g35610 --------->ARR14(2)--------->ARR14(2)              --------->AHL20(2)   gagttttacctgaagctactgagaaagagattgaatccactggaaaaactgaaaccgcttctcctccaaagtaagtgtttgaatcaaatacaacttctct  17567900                                                                                                  ---                                                                                           ------>ZmHOX2a(2)                                                                                         <---------AGP1                                                                                         --------->AGP1                                                                                         --------->ARR11(3)                                                                                        <---------CCA1(2)                                                                                ------>NtERF2  <-----                   --------->GLK1(2)                                            ----------->RAV1(1)                   <---------ARR14(2)                                    <---------AtLEC2<---------ARR11(3)                   --------->ARR14(2)                                   <---------MYB46(3)<------ZmHOX2a(2)                   ------->TEIL                                     <---------MYB46(3) ----------->ARR10              ----------->GT1                                     <---------GLK1(2)    --------->MYB59       <-------GAMYB                           <---------ANAC58<-----------RAV1(2)   <---------MYB52(1)       --------->REM1(2)  ------>ZmHOX2a(2)    <---------ANAC58=============================RAV------   gaaaatgtgtgttgagttgtgaatctgatctaatctaatctatgctatttcttgttttatagggctcagattgttggatggccaccagttagatcttaca  17568000  Previous    Next  AGI:  At5g43700.1    Description:  ATAUX2-11 (indoleacetic acid-induced protein 4); transcription factor. Identical to Auxin-responsive protein IAA4 (IAA4) [Arabidopsis Thaliana] (GB:P33077); similar to SHY2 (SHORT HYPOCOTYL 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G04240.1); similar to At1g04240-like protein [Arabidopsis lyrata] (GB:ABY61939.1); similar to At1g04240-like protein [Arabidopsis lyrata] (GB:ABY61938.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 17567460    to: 17568808    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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