Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                <---------------AtSPL3                                      ---------                                --------------->AtSPL8                                    <---------TOE1(2)                               <--------P                                           ------>ZmHOX2a(2)                              <------NtERF2                     --------->At4g35610<------ZmHOX2a(2)                              --------->At5g28300        --------->ANAC55(2)      --------->AGP1                            <---------DEAR3(1)           <---------ANAC55(2)      <-----------ARR10                          --------->LBD16                --------->ANAC55(1)      <---------ARR11(3)                          ------>NtERF2                  --------->ANAC46         --------->ARR14(3)                         <---------LBD16                 --------->ANAC58         <---------AGP1-----                         <---------RAP2.6(2)             --------->ANAC58         <---------GLK1(2)                         <---------RAP2.3(2)            <---------LBD16           <---------ARR14(3)                        <---------LBD16           ------>ZmHOX2a(2)               --------->ARR11(3)                     <---------GLK1(1)           <------ZmHOX2a(2)                <---------ARR14(2)               <---------MYB52(1)               --------->ARR14(2)                --------->ARR14(2)              --------->LBD16<---------MYB46(3) <---------ARR14(2)               <---------CCA1(2)              --------->At5g28300   ------->TEIL--------->ARR11(3)             <---------HSFB2a(2) -->ID1      <---------ANAC46<---------DEAR3(2) <---------ARR11(3)             --------->HSFB2a(2)   tctcttctctattcgccgtgagtatttccggcggtaagtacctctctagggatcttaatacggaagagctaaattcaagttccagatcttcgtagttatc  17555400                                                             <---------ZAT14                                                          --------->At4g35610                                                          ------>NtERF2                  ------>ZmHOX2a(2)                                                          <---------At4g35610          <---------ARR11(3)                                                         --------->DEAR3(1)       <---------MYB46(3)                                                         <---------DEAR3(1)      <---------WOX13(1)                                                        --------->RAP2.3(1)      <--------P                                                        --------->ATERF1(1)     <-------GAMYB                                                        <------NtERF2          <---------MYB46(3)                                                       <---------RAP2.3(1)     --------->MYB55(2)  --                                                      <---------DEAR3(1)      <---------AtMYB61    --                                                    <-----------HVH21         --------->ALFIN1    ---                                              <----------DOF2--------->ZAT14 <---------MYB52(1)   <-- ----YAB1        <------ZmHOX2a(1)    --------->GLK1(1)------>NtERF2     --------->MYB52(1)       --- >ICU4   <-------GAMYB           <---------LBD16   <-----------RAV1(1)  <---------WRKY38(1)    ------ ---->YAB1     --------->MYB59  <---------LBD16 <-----------RAV1(1)   <-----------HVH21--------->ARR11(3)   agaattgtgctcgttgttaggaagaagactcagcctcgggatagccatctttgttgtcgccgctgcagtagtagtcaccggtggttgatgatctctacct  17555500                     <-----------HVH21                     <-----------TGA1                    --------->ANAC46                 <---------ALFIN1                --------->ETT(2)                <---------ETT(2)           <---------At5g28300        <-----------HVH21     --------->ZAT14--------->DREB2C(2)    --------->ARR14(2) <---------ALFIN1                          <----------DOF2         <---------HSFB2a(2)    <---------ARR14(2)<---------MYB52(1)                    <---------HSFC1(2)           --------->HSFB2a(2) --------->RAV1(1)  --------->DEAR3(1)                      <---------HSFB2a(1)         <---------LBD16 ---->NtERF2    --------->SPL7                              --------->HSFC1(2)        --------->GLK1(2) ------>ANAC46<-----------HVH21                  <------ZmHOX2a(2)                   <---------GLK1(2) -------ETT(1)--------->ORA47(1)                --------->ARR11(3)                   <---------ARR14(2) -------->HVH21 --------->MYB46(3)              <---------ARR11(3)  <-----------GT1  --------->ARR14(2) --->TOE2(2) --------->DEAR3(1)     <------ZmHOX2a(2)       --------->HSFB2a(1)  <---------LBD16   ccgacagttctgtcaccgtccaccgtcacctcttgccgatcacttcgaaagatcaaaatcgaagtttctttaacctctcgatttggggattctggaattt  17555600                                                                                          <---------ANAC46                                                                                         --------->ALFIN1                                                                                        <-------GAMYB                                                <---------DAG2                         <---------ANAC46                                                <----------DOF2              --------->ANAC58                                      --------->GLK1(2) <---------MYB52(1)   --------->ANAC46                             --------->MYB46(3)<---------ANAC58              --------->ANAC58               <-----------GT1<---------ALFIN1 <---------ANAC58              --------->ANAC55(2)       <---------MYB52(1) <-----------GT1--------->ATHB12                   --------->TOE1(2)      --------->LBD16  <---------AHL20(2)<---------AHL20(2)                <---------ALFIN1 <--------      <-------GAMYB   <---------AHL20(2)--------->AHL20(1)        <----------DOF2      <---------ANAC58  <---------ARR14(2)  --------->AHL20(2)--------->AHL20(2)       <------NtERF2         <---------ANAC58 --------->GLK1(1)    <---------AHL20(1)<---------AHL20(2)      ------>NtERF2<---------ANAC55(2) <---------GLK1(1)    --------->AHL20(1)<---------AHL20(1)     <---------ANAC46   --------->CCA1(2)   ggggtttccgttaaatttcaccaatttatttcccaccgagaatttattggctttttctgttatcggcgcgttttcgaacacgcgatatggcgttgtggat  17555700                        ----------->GT1                        --------->ANAC58                        --------->ANAC58              --------->AHL20(2)       <------ZmHOX2a(2)                 <---------------AGL15                <---------AHL20(2)      --------->ARR14(2)                 --------------->AGL15                <---------AHL20(1)      <---------ARR11(3)              ------->GAMYB                     --------->ANAC55(2)           <---------ARR14(2)             --------->MYB46(3)                 <---------ANAC55(2)    --------->LBD16         <-----            --------->RAP2.6(3)              <---------MYB52(1)      <---------LBD16          <------           --------->MYB52(1)              ----------->GT1    <---------MYB52(1)------>ZmHOX2a(2)----           <-----------GT1              <---------ARR14(2)  --------->MYB59   --------->ARR11(3)-----        --------->YAB1 --------->DAG2   ------------>MYB.PH3(1)   <----------DOF2            <------- -ANAC46<---------ICU4---------->DOF2   --------->ARR14(2)  --------------->AtSPL3 <----------DOF2 --   tatcggcccattataacggcccaaaaaagcaaaaatgcttcgaatcggttacttaaaaaatttcggtactttccggttaagatccctttcaatatttccc  17555800        --------->ANAC58                            --------->ZAT18        --------->ANAC58                         <---------ANAC58    --------->ANAC58                           <------MYB46(1)    --------->ANAC46                           <------MYB83    --------->ANAC58                         <---------ANAC58 ----LBD16------->GAMYB                      <---------ANAC58 ---LBD16--------->MYB46(3)               <---------RAP2.6(2) ----->LBD16                            <-----------RAV1(1) ------------>CBF       ---------->DOF2 ---->LBD16                   <---------At5g28300<---------ANAC58        ----------->GT1 ----GT1-------->P           <-----------GT1 <---------ANAC46           --------->DAG2 ------->ARR14(2) <---------YAB1    <XXXXXXXXXXXXXXXXXXXXMIR420        ---------->DOF2         <-----   ggttactagcaaccaagaacatgatggagaattactgtatttttgtggctggtttgcgctaaaacaatttcagaaaagtgaatataaaagttacaagaat  17555900                                                                 ------->TEIL                                                              --------->ANAC58                                                              --------->ANAC55(2)                                                              <---------ANAC55(2)                                                              --------->ANAC46 <---------ANAC58                                        ------>ZmHOX2a(1)     --------->ANAC55(1)                             --------->REM1(2)             <---------ZAT18     ----------->RAV1(2)     <------ZmHOX2a(1)      <---------ANAC46         --------->YAB1 --------->MYB52(1)        <------ -------CBF               <---------ANAC46    <----------DOF2 --------->ANAC58 <---------ANAC58   <--   tgtataaggagatgtctcagtctcataggtgtgtatagtttcctaatgctttcacttatagttcacgtatcaacgggttttgcctgagtttggaaacttt  17556000                                    <---------ARR11(3)       <------------CBF             --------->ARR11(3)                      <---------ATHB12    >>>>>>>>>>>>>>>>>LFY <---------ZAT6                                   ------>MYB46(1)         ---  <-----------GT1 <---------At5g28300<------ZmHOX2a(2)         --------->At4g35610   --------->YAB1 - ----DOF2   ------------>CBF--------->ZAT18  <----------DOF2  --------->MYB59--------->YAB1<--------- --------DOF2    --------->YAB1 ---------->DOF2       <-----------GT1     ------>MYB83  <---------GLK1(2)   cttttatcccattggacaattacagtagtgttcacaaagatcaaaacctttctgtataacaaatcaggtccaaaccaaatcatacatttagaatttccat  17556100                                            <---------YAB1                                            --------->ICU4                                   --------->ALFIN1            <-------TEIL        <---------TOE2(3)                  <---------ANAC46           --------->CCA1(2)    --------->DAG2               --------->AHL20(2) --------->CBF          <<<<<<<GRF7<---------REM1(1)         <---------AHL20(2)  <---------ATHB12 -------->WOX13(1)  ----------->RAV1(2)   <---------ICU4   --------->YAB1 <-----------GT1        ---- --GT1 --------->YAB1 ----------->HVH21 --------->ARR11(3) --------->TOE2(3)----------------->AG <---   atcaatctataagattcagaaaacctgacaatataaggtgtagataatgactaaataccaatattaattgtttgtataacccaattagtcaaaaccatta  17556200                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)                                                                                      --------->GLK1(1)                                                                                      <---------GLK1(1)                                                                                    <------ZmHOX2a(1)                                                                                 --------->HSFC1(1)                                                                                 <---------HSFC1(1)                                                                                 --------->HSFB2a(2)                                                 ------>ZmHOX2a(1)         <---------ARR14(2)                                        ----------->RAV1(1)                <---------ARR11(1)         --------->AHL20(2)           ------>NtERF2                        --------->ARR11(3)         <---------AHL20(2)        <---------At4g35610    <---------At5g28300    <---------HSFB2a(2)  ------->TEIL                     --------->At4g35610 <-----------HVH21   --------->ARR14(2) ------->RAV1(2)                  --------->MYB52(2)  <----------DOF2      <---------ARR11(3) ------ANAC46             <-----------GT1   --------->GLK1(1)             <---------CCA1(2)   cctgtaccgattaaaatccaaaccaattttacaggtttgctgccacatttcctagcctttcactgccagagattgcaaatcttctaggaaatcttgaaga  17556300  Previous    Next  AGI:  At5g43660.1    Description:  oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. similar to oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT1G48740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42214.1); similar to Os01g0502400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043135.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPr Range:  from: 17553564    to: 17555822    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g43670.1    Description:  transport protein, putative. similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT4G14160.2); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT4G14160.1); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT3G23660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71289.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67335.1); similar to hypothetical protein OsI_013051 [Oryza sativa (indica cultivar-group)] (GB:EAY91818.1); contains InterPro domain Sec23/Sec24 trunk region; (InterPro:IPR006896); contains InterPro domain Zinc finger, Sec23/Sec24-type; (InterPro:IP Range:  from: 17555988    to: 17559161    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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