Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->AHL20(2)  --------->ICU4                        <---------AHL20(2)   <---------TOE2(3)            <---------AHL20(2)           <----------DOF2 --------->ARR11(3)                        <-          --------->CCA1(2)              --------->TOE2(3)           --------->GLK1(2)     <---------YAB1         <---------ARR11(3)     ---------->DOF2          <---------ARR11(3)              --------->YAB1         --------->ARR11(3)    --------->AHL20(2)       <---------CCA1(2)               <---------YAB1   gacgaagtcgagatataaatctatattttaaaataaaagattactttaatgtttatctaaatcttttgaagaatctattgaaaatgacatatcattatag  17529300                                         ----------->GT1            <---------ANAC46  --------->YAB1 --------YAB1    <---------MYB46(3)<-------TEIL           ----------->GT1---------->DOF2    <--------   tatgactaatttcaaatggtggatgcaaaattgcaaatacatgtagaaaaatttgcagacgagttatatgacttataaagctagtgtatcatatttttta  17529400                                                                  --------->ARR11(3)                                                                  <---------AHL20(1)                                                                  --------->AHL20(1)                                                                <---------AHL20(1)                 --                                 --------->CCA1(2)              <---------ARR11(3)                ---                                --------->ARR11(1)       <------ZmHOX2a(1)                        ---                                <---------ARR11(3)     XXXXXXXXXXXXXXXXXXXXX>MIR447A/B            <--                            ---------->DOF2           --------->YAB1                            -----                          <---------YAB1             <---------ATHB12                       <--------   --------->YAB1    <----------DOF2       --------->TOE2(3)    --------->AHL20(1)        --------->ICU4 -AHL20(2)     <---------YAB1   --------->ARR11(3) --------->WOX13(1)                     <---------ATHB12   gtttataaaaacagcatatgatacttttatgaaagatatgttttttcttaaaacaatcaggaacaaaatattttgtatgtaggctctatgcaataagtaa  17529500      <-----------GT1    <---------WOX13(1) <---------YAB1                                                               ---------->ID1 --------->ICU4                                                              <-----------GT1    ----- ------->CCA1(2)                                                    <---------WOX13(1)          ----- ------>ARR11(3)              <----------DOF2                     --------->ATHB12             <----- ------>ARR11(1)  --------->MYB52(1)                              -------->HAHB4               <----- -------ARR11(3) --------->TOE1(2)       <---------YAB1       <---------AHL20(2)              <------ ------>ARR10   --------->MYB46(3)  --------->At4g35610      <---------AHL20(2)              -------- -ANAC55(2)     ------>ZmHOX2a(2)   <---------At4g35610      --------->AHL20(2)        --------->ZAT6   gatatgattaacaattgatccaacgaattgggcttttcagatgatgaaacgggcctctatgaaataaatgatggatttttttccttctaactctctaatg  17529600                                                  <---------AHL20(2)                                                  --------->AHL20(2) --->HAHB4                                       --------->YAB1 ---->YAB1                                  <-----------TBP                                  -------- ----YAB1                                <---------AHL20(2)                            ------------>CBF ----ATHB12                         <---------AHL20(2)                                --------->GLK1(2) ---TOE2(3)  --------->GLK1(2)--------->TOE2(3) <---------------AGL15     --------->At4g35610<------- ->YAB1    --------->HSFB2a(1)<----------DOF2   ----------->TBP  <-----------GT1 <------ZmHOX2a(2) --   atacaaaatacaaagattccaaaacatataaactttaattcattttttttataaaaatagtagtattttacatatgagatgagatcagaatcaatagagt  17529700                                                                                                -----                                                                                    <---------AHL20(2)                 <---------ARR14(2)       --------->LBD16                       --------->AHL20(2)                 <---------GLK1(2)    --------->GLK1(1)               ------->GAMYB --------->AHL20(2)                 --------->ARR14(2)   <---------GLK1(1)         --------->YAB1  <---------AHL20(2)   *TSS     <-----------HVH21     <---------TOE2(3)             <---------ICU4 <---------AHL20(2) ------->AtSPL8 --------->At4g35610  --------->ARR14(2)        <---------ATHB12--------->AHL20(1) --------AtSPL8 <---------At4g35610  <---------ARR14(2)        <---------YAB1  <---------AHL20(1) --------->RAV1(1)--------->GLK1(1) <------ZmHOX2a(1)          --------->ICU4  --------->AHL20(2) ---   acaacaaaacactctgtcagattcccacttagttttgaggattccccaaaaaacaaatttggacaatgataacgctcaaaatttaattaataagtttccc  17529800               <---------ATHB51               --------->ICU4             ------>MYB46(1)           --------------->AGL15           <---------MYB59          ----------------->AG          ----------------->AGL1                                                                   <-        <-----------GT1                                                <---------AHL20(2)          --     --------->YAB1                                                   --------->YAB1            -----     <---------ICU4                                                  --------->AHL20(2)     ---------    <---------YAB1<---------YAB1                                 --------->AHL20(2)         <-------- ---->LBD16<---------------AGL15              --------->YAB1----------->GT1     <---------HSFB2a(1)-- ------->DOF2------>MYB83               --------->YAB1     <------ZmHOX2a(1)  <---------GLK1(2) <----   caaagtataattaccaaattatgaatgaatagtattgctctctcagaatcaaaacactgaaggagaaaaaaataaaaatggaatctttgaaacgtttcct  17529900                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                 ----                                                                                                 <---        <---------ANAC58                                                                        -----        <---------ANAC58                                                                      -------       <---------ZAT18                                                                       <------- <----------DOF2                                                                             <------- --------ZAT14                                                                               -------- ------->At4g35610                                                         <<<<<<<<<<<<<<<<<LFY <---- ->ZmHOX2a(1)                                                           --------->YAB1--------->ARR11(3) >ARR14(2)                                    --------->At4g35610    --------->WOX13(1)     <-------- -ARR14(2) <----------DOF2         --------->TOE1(3)       ----------->RAV1(1)        <---------ARR11(3) ------->ZAT14       <-----------GT1          <---------At4g35610 ------->TEIL        <---------GLK1(2) -----At4g35610   <---------CCA1(2)--------->TOE2(3)--------->MYB46(3) <---------ATHB12   <----------   ctgctctattgcgcttcttcttatctcccttcttctaccttcaagcttagctcaacaacaacaacatgaatcaatcagaacaatggaagatttttccgga  17530000           ------->TEIL           --------->MYB52(1)        --------->ANAC58        --------->ANAC46 ---------MYB59 ------->ANAC58 ------->ANAC58 ----->GLK1(1) ------GLK1(1)                                                                                ------- ---->ARR14(2)                                                                               -------- -->LBD16 <---------ARR14(2)                                                               ---------- --ANAC46 --------->ARR14(2)                                        --------->RAP2.6(3)    <--------- --HSFB2a(2)      <---------WRKY38(1)                            --------->LBD16          <---------- ->HSFB2a(2)    <-----------HVH21--------->WOX13(1)             <---------HSFB2a(2)       <---------- -----ARR14(2)--------->LBD16  <---------ATHB12        <---------MYB52(1)                 --------->TOE2(3) -LBD16 --------->ANAC58  --------->ARR14(2)          <-------GAMYB<------ZmHOX2a(1)    <---------ARR11(3) -GT1 <-----------GT1  --------->MYB59       --------->ZAT14    --------->HSFB2a(2)<-------TEIL  ----   tacccaattcacgaaccgggtcaattcggttccatcaatctcgcttcttcactctccgttgatgctccaggactgcaaaaccaggttcaatttcttaaag  17530100   ----------->GT1  --------->ZAT6 -->DAG2 -->DOF2 ----->AGL15 ------AGL15                                  --------->ARR11(3) -------AGL2              <----------DOF2     <---------ARR11(3)                           <---------At4g35610 -------AGL3   <---------TOE2(3)     <---------WOX13(1)                        <---------STY1(2) ----->ALFIN1 ---------->DOF2     <---------YAB1 <----------DOF2           --------->At4g35610     --   tggaacagtagataactaaagtttagaactttgattttgatggatgaagttcttttgtttttggttttagatagatgagctatctagtttctctgatgct  17530200  Previous    Next  AGI:  At5g43600.1    Description:  N-carbamyl-L-amino acid hydrolase, putative. similar to ATAAH (ARABIDOPSIS THALIANA ALLANTOATE AMIDOHYDROLASE), allantoate deiminase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT4G20070.1); similar to amidase, hydantoinase/carbamoylase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99240.2); contains InterPro domain Peptidase M20; (InterPro:IPR002933); contains InterPro domain Amidase, hydantoinase/carbamoylase; (InterPro:IPR010158); contains InterPro domain Peptidase M20, dimerisation; (InterPro:IPR011650) Range:  from: 17529703    to: 17532722    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version