Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <-----------GT1                  <---------AHL20(2)                <---------AHL20(2)              <---------AHL20(2)             <---------AHL20(1)                                             <------ZmHOX2a(1)             <---------AHL20(2)                                     --------->ICU4             --------->AHL20(1)                                --------->ANAC58             --------->AHL20(2)                                --------->YAB1             <---------ARR11(3)                                --------->ANAC58 ------>ZAT14--------->ARR11(3)                                --------->ANAC55(1)                 <- ---ICU4    --------->AHL20(2)                                 --------->ANAC55(2)           -------- -->ZAT6<---------AHL20(2)    <-----------GT1--------->AHL20(2)----------->GT1              <-------- --YAB1 --------->AHL20(2)  <---------WOX13(1)                 --------->ANAC46    <---------ARR11(3)   tactcacaaaataaatatattttttcactgatttactagagaaccaattgaataacatggtctaaacgtaatttttgaggagcaataccttctagtggta  17513800                                                          <---------YAB1                                                          --------->ICU4                                                        <---------ICU4                                                        <--------ATHB1                                                        -------->HAHB4                                                        <--------HAHB4                                                        --------->YAB1                                                        --------->ATHB51                                                       <---------YAB1                                         --------->YAB1--------->AHL20(2)                                         <--------HAHB4--------->ICU4   --------->AHL20(2)                   <---------YAB1 <---------ATHB51   <---------AHL20(2)                 --------------->AGL15    -------->HAHB4  <---------AHL20(1)                  <---------------AGL15    --------->YAB1  --------->AHL20(1)                 ----------------->AGL2   <---------YAB1  <---------AHL20(2)                 <-----------------AGL2 --------->YAB1               <---------AHL20(2)  --------->AHL20(2)                 <-----------------AGL3--------->AHL20(2)          --------->CCA1(2) --------AHL20(2)                    ----------------->AGL3<---------AHL20(2)         <---------ARR11(3) --->GT1                       <-----------GT1     --------->AHL20(2)       --------->YAB1 -ZAT6  <-----------GT1      <---------AHL20(2)  ----------->GT1        --------->REM1(1)--------->AHL20(2)   taaatttattttgcctcttagatttagctatataaactttctattattagcaagttaataattaataataggctacatttataatctagatataaataat  17513900                  <---------AHL20(2)                  --------->AHL20(2)                                                <----------ID1               --------->AHL20(2)                                                   --------->ANAC58              <---------AHL20(2)                                     --------->CCA1(2)      <--------              --------->AHL20(2)        ----------->GT1     <-------TEIL            --------->ANAC58           --------->AHL20(2)      --------->At5g28300  <---------------AtSPL8     --------->DAG2          --------->AHL20(2)  <---------ARR14(2)        --------------->AtSPL8    ---------->DOF2          <---------AHL20(2)  --------->ARR14(2)      <------------CBF      ---------->DOF2 ---------      --------->AHL20(2) ------>ZmHOX2a(1)          <---------AHL20(2) --------->ANAC46    <---------ATHB12   acatgagaataaataaataaataaatccttcaaatacggtgatagttataagaaaaaattggtacataaatatacgaagaaagaaaaagccaaatcatgt  17514000                                <--------HAHB4                                           --------->ANAC46                           ----------->GT1                                   ------>MYB46(1)                         ---------->DOF2       <---------AHL20(2)            ------>MYB83--------->ANAC58                      --------->ANAC58     ----------->TBP                --------->MYB46(3)  <------                      --------->ANAC58<---------ZAT6                    <-----------GT1  --------->ANAC58 -ICU4           --------->ANAC46 <---------YAB1             ------>ZmHOX2a(1) --------->TOE2(3) >YAB1         --------->ANAC46<---------YAB1  --------->AHL20(2) --------->YAB1------>ZmHOX2a(1)   -   cttccaaacatataaacacacatcaagaaaagtattattagtcttatatataaattttgtttcctctatcatataaaccatccttatatgcactcaacac  17514100                                                  ------------>CBF                                            <---------ANAC58                                            <---------ANAC46                              ---------->DOF2   --------->GLK1(1)         <----------DOF2   --------->TOE2(3)<---------ANAC58         ----------->TBP           ------ <-----------GT1           --------->TOE1(3)<---------LBD16         <---------AHL20(1)        <------ ---ALFIN1      <----------DOF2      ------>ZmHOX2a(1)              --------->AHL20(1)      --------- ---------->HVH21    <---------At4g35610   <---------LBD16         --------->AHL20(2)    --------->ANAC46   atttgacaactctttcatctttcatcttcccttaaagtcctatatttcgggtatcaatatttcttcaaaatatatatccctcgatcgatcgaggcaacac  17514200                                                        --------->MYB52(1)                     <---------ANAC58          --------->TGA2(2)              <---------AHL20(2)              <-----------HVH21              ----------->TBP                 <-----------TGA1            ----------->TBP                  --------->O2                       <---------TOE1(2)            --------->AHL20(2)               --------->ANAC46              <-----------HVH21          ----------->TBP                    --------->bZIP60(2) <-----------HVH21         <---------          --------->AHL20(2)                 --------->TGA1a  --------->At4g35610         --------->ETT(2)        --------->AHL20(2)                   <---------O2<---------LBD16 --------->ATERF1(1)        ----------->TBP<---------ZAT6        --------->ANAC58 <---------At4g35610   <---------DEAR3(1)      <---------AHL20(2)                     --------->ANAC58 --------->ZAT14   --------->SPL7      ----------->TBP<---------ANAC58       <-----------bZIP911(1)  ----------------------->TaNAC69(2)      --------->AHL20(2)                    <-----------STF1  --------->ZAT2  <---------SPL7    --------->AHL20(2) --------->ALFIN1    <---------ALFIN1--------->LBD16--------->DEAR3(1)<--------    ----------->TBP  <---------ANAC46   <---------SPL7 <---------ARR14(2)--------->DEAR3(2)<--------- ->GAMYB<---------AHL20(2)      <------ZmHOX2a(2)      --------->ARR14(2)<------NtERF2   <------NtERF2 ---ALFIN1<---------AHL20(2)   <---------ARR11(3) <---------At4g35610--------->ANAC58  <---------DEAR3(1) -->RAV1(1) <---------AHL20(2) --------->ARR11(3) --------->At4g35610--------->ANAC58 <------NtERF2 <   acacatatatatatatatatatggagtgtgagagatcatcgtcgtccacgtcatcagaaaccggagcagtcaggcaccgtcgtacgtcgtcgtcgtcagt  17514300        <---------TGA1a        --------->TGA1a        --------->bZIP60(1)        <---------O2        <---------bZIP60(2)        <---------bZIP60(1)                                                                --------->O2        =================================bZIP_DOF                 <---------AtMYB61        <---------O2      --------->REM1(2)       <---------DAG2                   <----------DOF2             --------->TGA1a     ----------->HVH21    --------->ZAT14                      ======================================bZIP_DOF     ----------->TGA1     <---------ZAT14                   --------->ANAC58               <---------TGA1a    <-----------HVH21     <---------ZAT18                   --------->ANAC58        <-------TEIL --TGA1 =================================bZIP_DOF     --------->ANAC58          ------->TEIL -------- -MYB52(1)        --------->TOE1(2)   ---------->DOF2 --------->ANAC58     --------->At4g35610 --HVH21--------->O2      --------->ZAT18           ---------->DOF2   ----------->GT1      --------->ANAC46 ---------ALFIN1------->TEIL  <----------DOF2       =================================================bZIP_DOF   ctccaccgtgacgagacgaatgtacgagtgcactttctgcaaaagaggtttcacaaacgcacaagctttaggtggtcatatgaacatccatcgacgtgac  17514400                                                                          ----------->HVH21                                                                        --------->At4g35610                                                                        <------NtERF2                                                                        <---------At4g35610                                                                      <---------ANAC46                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                      <---------RAP2.6(2)                                                                     <------NtERF2                                                                   --------->ALFIN1                                                                  ------->PIF5                                           --------->ANAC58       <-------PIF5                                           --------->ANAC58       ------->MYC4                                  --------->ALFIN1                <-------MYC2                                <---------bZIP60(1)               ------->MYC2                                <---------O2                      <-------MYC3                                --------->TGA1a                   ------->MYC3                                --------->O2                      <-------MYC4                                --------->bZIP60(1)              --------->PIF3(3)                                <---------ANAC58                 >>>>>>>>>>HY5                                >>>>>>>>>>AtbZIP1                --------->O2                                <---------ANAC58                 <---------PIF3(3)                                <---------TGA1a                  --------->ANAC46                                <---------ANAC46                 <---------O2                                <---------bZIP60(2)              --------->TGA1a                              <---------TGA2(2)                  <---------TGA1a                             ----------->TGA1                ----------------->PIF3(1)     --------->ANAC58                           <---------At4g35610               <----------------PIF3(2)      --------->ANAC58                           --------->At4g35610            <---------HSFC1(2)               --------->ANAC46 --->HVH21       <-------TEIL----------->HVH21            --------->HSFC1(2)         --------->ATERF1(1)   cgtctcaacaaggccaaggtgcaaaacgatgctgacgtggcactctcgcaaactcatagatgtttccacgtggcgtctgaccttggaggctacgagcaag  17514500                                                  --------->ARR14(2)                     --------->DEAR3(1)           ------->TEIL                   <---------ATERF1(1)            --------->GLK1(2)                 --------->SPL7          <---------ALFIN1                <------ZmHOX2a(1)      ----------->RAV1(1)                            <-------GAMYB       <---------ANAC46           --------->REM1(1)                                  <---------MYB46(3)      <---------MYB52(1)   --------->TOE1(1)      <---------ARR14(2)                <------NtERF2     <-----------HVH21------>NtERF2  --------->MYB46(3)          <---------REM1(2)<---------DEAR3(1)   tagactccgtcgtgttgaggacgacgacctcgaactacatccaacacttacgaatcggctcgatggctacaaggagagaaaacgtcgtcgttgaaggaaa  17514600                              <---------ARR11(3)                        <---------ANAC58                        <---------ANAC46                        <---------ANAC58                <---------ANAC46                <---------ANAC58                <---------ANAC58                                    --------->ANAC55(2)               <-------TEIL   --------->ARR11(3)                    <---------ANAC55(2)            --------->ZAT2   --------->YAB1                     --------->YAB1            <---------ZAT2  <---------YAB1 <-----------GT1      -------->HAHB4         <---------AHL20(2)            --------->At4g35610 --------->YAB1                 <---------YAB1  <---------ANAC46            <---------At4g35610<---------YAB1                --------->YAB1  <---------ANAC46      <-   tgaaatcgatttggagctgcgtcttggcttatgatcatcaacttcttaccctctatagatgtataataatacgtttttttggtgtatattatatggtttt  17514700  Previous    Next  AGI:  At5g43540.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G53820.1); similar to TAC1 (TELOMERASE ACTIVATOR1), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G09290.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC45176.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 17514221    to: 17514634    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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