Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------ANAC58  <---------ANAC58  <---------ANAC46 ---->ATHB1 ----->ATHB12  --------->ZAT2   <---------ANAC46                        <---------ZAT14 ------ICU4    <---------At4g35610                                      --------->ZAT14 ----->YAB1    --------->At4g35610                                  --------->ZAT6 -----YAB1<-----------GT1       ----------->RAV1(2)               <---------DOF5.7(2) -----ATHB12   <---------ZAT2  ------>NtERF2                    --------->DOF5.7(2)             <----   cattgcttatattctccagctcatttacattgctgcctgaactctgcaaacagtcatatagagctcgttaacacttcagagactatattttcaagagagg  17484300                                                      <---------GLK1(2)           --------->AHL20(2)                                         --------->DAG2           <---------ARR14(2)             ----                                        ---------->DOF2           --------->ARR14(2)<---------AHL20(2)                                     --------->YAB1   <---------ARR14(2)        --------->AHL20(2)          <---------ZAT14          <---------WOX13(1) --------->ARR14(2) ------->PIF5    <-----------          --------->ZAT14        <------ZmHOX2a(1)   ------>MYB83<------ZmHOX2a(1)<---------AHL20(2) --------->ANAC46       <---------------AGL15        ------>MYB46(1)     <-------PIF5 <---------AHL20(2) --ZmHOX2a(1)           --------------->AGL15      <---------MYB59--------->GLK1(1) --------->AHL20(2)   aacacaaaaccttgcactgttgaaaactatttagaggattgataaagctgtaaccaaattctcatcaggattccacgagcatatatatatatatgtacag  17484400                                                                 -------->HAHB4                                                                 --------->YAB1       --------->AHL20(1)                                       <---------YAB1       --------->ARR11(3)                                     --------->YAB1 <-------MYC2       <---------AHL20(1)               --------->TOE2(3)    --------------->AGL15       <---------ARR11(3)               --------->TOE1(3)    <---------------AGL15    <---------ICU4      --------->AHL20(2)       --------->ANAC58            ------>ZmHOX2a(1) <-------MYC3 ------->GT1                   --------->ANAC46          --------->ZAT18     ------->MYC2        ---- ----AtSPL8                    --------->ANAC58    --------->At5g28300       ------->MYC3<-----------GT1   agtaacaaatatatcattttgagagaaacacacacgaagacaccttaactcactgtaagtcctctaataatagttaacacatgcctaagtattacaaaac  17484500                                                                     ----------->GT1                                                                     --------->YAB1                                                                    <---------YAB1                                                                 <---------AHL20(2)                                                              --------->AHL20(2)                                                              <---------AHL20(1)                                                              <---------AHL20(2)                    -                                                              --------->AHL20(1)                    -                                          <---------WOX13(1)  --------->ARR11(3)                    -                                  --------->At5g28300         <---------ARR11(3)                  ---         <---------ETT(2)    --------->ANAC58           --------->ANAC46                  <---------YAB1   --------->GLK1(2)         --------->ANAC58           --------->ANAC58           --------->ARR14(2)  <---------GLK1(2)  <---------ZAT2 --------->MYB52(1)  --------->ANAC58<-----------GT1--------->ICU4 ------->RAV1(1)--------->YAB1<------ZmHOX2a(1) ----------->GT1  <---------YAB1    <---------ARR14(2)   cacagaaactgtctactatagtaagcagggcaggacagtaacagattgatcagttaataagcaatatattattgtaacatgaccatatactgatgaatac  17484600       ---------->DOF2                                                             ---------->DOF2   --------->GLK1(2)                                                             --------->YAB1   ------->TEIL              <-----------HVH21                       --------->REM1(1)             -- -------->ANAC58        <---------At5g28300                          --------->MYB46(3)            -- -------->ANAC58       <-----------GT1      <--------P             ----------->RAV1(1)           ---- -------->ANAC46  <---------TOE2(3)     <------ZmHOX2a(1)        --------->At4g35610             <--- ------>ANAC46  ---------->DOF2      <-----------RAV1(2)   <------ZmHOX2a(1)*TSS<---------YAB1-------   acacgaatctaaagagaataaaggtttaccgtttcagtcgcaggaggtagccattgagagaggagacagcaacaacaagcttatcaaaagacaagaccac  17484700                                                                    <---------YAB1                                                                   ==================================                                                                   --------->TOE2(3)                                                                   --------------->AGL15                                                      --------->ARR11(3)                                                      <---------ARR11(3) --------->ZAT14                                     <---------GLK1(1)    ----------->GT1 <---------ZAT14                                 <---------WOX13(1)<---------------AGL15 ------->ANAC46                                 <---------AtLEC2  --------->YAB1 ------->bZIP60(2)                              <---------ANAC58  <--------HAHB4 ----->AtMYB61                                  <---------ANAC58 <---------ATHB12             ------- ------ALFIN1     <---------GLK1(1)         <----------DOF2      <---------YAB1--------->ICU4-------- -->AtMYB61<---------YAB1        --------->AtMYB61   <---------CCA1(2)---------->DOF2  ----------->GT1   cacttcactgtgtattatagaattcagtatcaagaccacaaggcttctttgcttgatatcttgttctatcattaaagggtaattctcatcagtaaaaaag  17484800                                               <---------ALFIN1        <---------ZAT6                                              --------->SPL7     --------->ATHB12                                            <---------SPL7       <--------HAHB4                                           --------->TOE2(1)     <---------ICU4                                           --------->TOE1(1)    <---------YAB1                                 --------->ANAC58             --------->YAB1      ---------->DOF2            --------->ANAC46     <---------At4g35610    <---------ZAT6               --------->ANAC58     --------->At4g35610   --------->MYB46(3) ===============================================================================MADS_MADS -->DAG2            ---------->DOF2       --------------->AtSPL8<---------------AGL15  <------------CBF -->DOF2----------->GT1        ------>ZmHOX2a(1)  --------->AtMYB61<---------YAB1     <---------ICU4   cacttagtgaaagtaatttcccaaaagtctctcctacgcatttcatcgtacaccttcgctgcattgatcattagagtaaccaaaaccaaaattgctctct  17484900                                                                                   >>>>>>>>>MYB1                                                                                   >>>>>>>>>MYB2                                                                                  --------->MYB52(1)                                                                                  ------>MYB83                                                                                  ------>MYB46(1)                                                                                <---------MYB111(1)                                                                         <------------CBF                                                 <------ZmHOX2a(1)      --------->ATHB12                                         <---------YAB1                <------ZmHOX2a(2)                                       <---------At4g35610             <---------YAB1                 ------>MYB46(1)     <---------ANAC58                 <---------ARR11(3)                 ------>MYB83        <---------ANAC58     --------->ATHB12      <---------MYB46(2)              ------------>CBF  <---------ARR14(2)       <------ZmHOX2a(2)      <---------MYB59             >>>>>>>>>MYB2      --------->ARR14(2) --------->GLK1(1)  --------->ARR11(3)    ---------      ----------->GT1          ------>MYB46(1)   ===============HOX2a_HOX2a   ------->TEIL  <------MYB83      <---------ZAT6           ------>MYB83      =============================HOX2a_HOX2a   <------MYB46(1)   cccatttagtgtgaaaaccaatctctcttcaccaaatttgcttctgagtgaggaattcgatcatttgactaagatcattgaacctaactgaagttggtat  17485000                                 <---------ARR14(2)                                 --------->ARR14(2)                                         <--------                              <---------HSFB2a(2)                              <----------DOF2                   <-----------GT1                                            ------>ZmHOX2a(2)      --------->LBD16         --------->HSFB2a(2)                            <------ZmHOX2a(2)     --------->ANAC46        <---------LBD16                                <---------ARR11(3)     --------->ANAC58    <---------ARR11(3)                                 <---------ARR14(2)     --------->ANAC58    --------->ARR11(3)                                 --------->ARR14(2) -->GT1         ----------->GT1--------->LBD16<-------TEIL                  --------->ARR11(3) <-----   aatacacccgtaaacaagaagttacaagatgtccggaaacgattcaagtccatggtttgaaacttgaagtaagagaccgatcttttaagtcaaatttatg  17485100                                                                                     --------->ATHB12                                                         --------->MYB59             <---------ICU4                       -------->HAHB4                <---------ICU4          <---------ANAC58                       --------->ATHB12              --------->ATHB12   <---------ARR14(2)              <------ZmHOX2a(1)                     --------->ICU4      <------------CBF        --------->TOE2(3)                           <---------YAB1--------->ZAT2    --------->ICU4     <-----------GT1  <---------ATHB12             --------->TOE2(3)    --------->ARR14(2) <---------ARR11(3)   <---------YAB1            ----------->RAV1(1)    <------ZmHOX2a(1) --------->ARR11(3)   --------->ICU4         --------->ANAC46 --------->ALFIN1      <---------YAB1 -AHL20(2)  <---------TOE2(3)   <-----------GT1--------->ANAC46   <---------ZAT2 <---------ZAT6     < ----YAB1<----------DOF2<------------CBF --------->AHL20(2) <---------AtLEC2 <---------ANAC58    <---   aaagatttaacctttaggatagaaatgattgtatttactaaaattatacacaacattattaggcatggagctaggattggctagtgatcattggtttatt  17485200  Previous    Next  AGI:  At5g43470.1    Description:  RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8). Identical to Disease resistance protein RPP8 (RPP8) [Arabidopsis Thaliana] (GB:Q8W4J9;GB:Q8GWG5;GB:Q9M5A1;GB:Q9ZSY3;GB:Q9ZSY4); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G35450.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G53350.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G48620.1); similar to LOV1-like protein [Olimarabidopsis cabulica] (GB:ABW24171.1); similar to resistance candidate RPP8-like protein [Arabidopsis arenosa Range:  from: 17479839    to: 17484676    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g43480.1    Description:  unknown protein Range:  from: 17484626    to: 17484871    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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