Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                ------>ZmHOX2a(2)                              <---------ARR11(1)                            --------->ARR11(3)                              --------->ARR11(3)                            <-----------ARR10                              <---------ARR14(2)                            <---------ARR14(2)                              --------->ARR14(2)                            <---------ARR11(3)                              --------->GLK1(2)                             --------->ARR14(2)     ------->TEIL             <---------ARR11(3)                            <---------AGP1  <---------YAB1             <---------CCA1(2)                             <---------CCA1(2)  --------->ICU4         --------->ANAC58                                --------->HSFB2a(2)       <- -------->YAB1           --------->ANAC58                               <---------LBD16    <---------HSFB2a(1) ---------ICU4       <---------REM1(1)                             <---------WRKY18(1)    --------->ARR11(3) ------->ICU4   <------MYB83 <---------ARR14(1)                 <---------ANAC58          <---------ARR11(3) ----->YAB1     <------MYB46(1)           <---------GLK1(1)     <---------ANAC58   ------>ZmHOX2a(1)   aataatgaatatcgaagttggtgttgtaagcaaatcttgtattgaaatctgtagcaaaatactgtttcttgacctctggatcttcctcatgaaatcttcg  17473500                                                     ----------->GT1                                                  <---------ANAC58       --------->ZAT2                        ----------->GT1           <---------ANAC58       --------->At4g35610                   XXXXXXXXXXXXXXXXXXXX>MIR2937   <---------ANAC46       <---------At4g35610            <---------ARR11(3)               --------->ATHB12            <---------ZAT2            --------->ARR11(3)           --------->ATHB12                ----------->RAV1(2)           <---------CCA1(2)            --------->ICU4                 <-----------RAV1(2)           <---------GLK1(1)---------->DOF2<---------WOX13(1)  --------->LBD16   <----------DOF2 --------ALFIN1<----------DOF2          <---------YAB1     --------->ARR14(2)    --------->TOE2(3) <-   aacaccttgtttgatatctttaagaacagttaaaggaataccatgattgattacttggaaaaatccccaattctcagctgcttctttaatcttggaaacg  17473600                                           <---------WOX13(1)                                         <---------ICU4                                         --------->ATHB12                                         <--------ATHB1               --------->At4g35610       <------------ATHB5             <-----------RAV1(2)         --------->YAB1            --------->At4g35610          -------->ATHB1               <---------GLK1(1)            <---------At4g35610         <---------YAB1                --------->GLK1(1)           ----------->RAV1(1)          <---------ATHB12              --------->CCA1(2)      <---------ANAC46                  <---------ATHB51             --------->ARR11(3)      <---------ANAC58                  --------->ICU4               <---------ARR11(3)       -------      <---------ANAC58               <---------WRKY38(1)         ---------->DOF2             --------     --------->MYB52(2)             --------->WRKY18(1)      --------->ANAC46      <-------GAMYB  --------->HSFC1(2)            --------->LBD16              --------->ANAC58     <---------MYB46(3)  <---------HSFC1(2)           <---------TOE1(1)             --------->ANAC58     --------->MYB52(2) -----ZmHOX2a(1)      <-----------GT1<---------WRKY12 <---------TOE2(3)       <---------HSFB2a(1)   aggacgtttcttgcagcagatgtgttaccatctccgaggtcaatgattgggacagtgaggtttaagccaaagatatcagaaggtttgttgttagataaag  17473700                            --------->ARR14(2)                            <---------ARR14(2)                            <-----------ARR10                           <------ZmHOX2a(1)                        --------->HSFB2a(2)                        <---------HSFB2a(2)                        <---------LBD16                      <-------TEIL  <---------MYB52(1)                     --------->CCA1(2)                     --------->ARR14(1)                    --------->ARR14(2)                    --------->ARR11(1)                    <---------ARR14(2)                   --------->HSFB2a(1)                   <---------HSFC1(2)                          <---------ALFIN1                   <---------HSFB2a(1)                     <-----------HVH21                   --------->HSFC1(2)                     ------>ZmHOX2a(1)            --------->CCA1(2)<---------HSFC1(2)           <----------DOF2          ---------->DOF2   >>>>>>>>>TBF1  ----------->ARR10<-------GAMYB     --------->ANAC58       --------->ETT(2) -->DAG2   --------->ARR14(2)--------->HSFC1(2)      --------->ANAC58 <----------DOF2 -->DOF2   <---------ARR14(2)<---------HSFB2a(1)<---------ETT(2) ----------->RAV1(2)   ttgaagaagaagggatatggaagattcgaggaacttcggttattttggtatcgacaagtcctttcacacctgcttttgtcgatacaaaagccttgagttc  17473800                    --------->ARR14(2)                    <---------ARR11(3)                    --------->ARR11(3)                    <---------GLK1(2)                      <-------TEIL                    <---------ARR14(2)                     ------->TEIL                <---------At4g35610                        --------->SPL7            <---------ARR14(2)                             <---------TOE2(2)            --------->ARR14(2)                             <---------TOE1(2)      --------->MYB52(1)                                 --------->TOE2(2)           *TSS     --------->TOE1(2)                    ---------->ID1 <---------SPL7     ---------->DOF2    --------->MYB46(3)          --------->ICU4       <---------ETT(2)    ----------->GT1    <---------MYB52(2)        --------->YAB1   <-----------GT1         <------ZmHOX2a(1)   gttcaaacgaacgagttctgcagatttttctgtcatgatgttttgtttttttctgtctacgtacgttgagagaggaagtaaagacagaagcgtagtcgtg  17473900                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                      <---------ANAC46                                                              <---------WRKY18(1)                                                             --------->WRKY38(1)                                                             --------->WRKY45                                 ----------->HVH21           --------->WRKY12                            ------>ZmHOX2a(2)               --------->DOF5.7(2)    <---------YAB1                          <---------ARR11(3)                <---------MYB52(1) ----------->GT1                          --------->ARR14(2)               =====================MYC_MYB                          <---------ARR14(2)               <-------GAMYB  <---------ANAC58                          --------->ARR11(3)              --------->MYB52(2)  --------->MYB59                          <---------AGP1                  <---------MYB46(3)  <----------------------                        <---------MYB46(3)       <---------CCA1(1)    <---------ANAC58          <----                     <---------MYB46(3)          <---------RVE1(1)    <---------TGA1a       <--------                    <---------AtMYB61           --------->ARR11(3)    ==============================bZIP_DOF --------->CCA1(2)--------->MYB52(2)            <---------ARR11(3)    <---------ANAC58   ---------->DOF2   aagataagaatttttgaagttagtggtggatctgtgtgacccattttgtagatattttgttcgttgactgtgacttgagtgaggtatcatcgaaagcgac  17474000                                                   --------->MYB46(3)                                       <---------ICU4          --------->YAB1               <--------HAHB4    --------->ANAC58                   --------->YAB1    --------->ANAC58                  <---------ATHB12  <---------AtLEC2                    --------->ICU4--------->AtMYB61 <---------ZAT18 -TaNAC69(2)                        --------->WOX13(1)           ------>ZmHOX2a(1) -----ANAC46                 <---------TOE2(3)    --------->ANAC58    --------->ZAT18         <------ -------------WRI1         ---------->DOF2        --------->ANAC58 <---------ANAC46           <------   ttgtgcaaggaagaataagtttcaaacttcaaaggtagcaatcattttttgcaaccaatgccatctccttcgtgggctagggttcttctgtattgggctt  17474100             <-----------GT1          <---------ARR11(3)   <---------MYB52(1)  <---------RAP2.6(3)                                          --------->ALFIN1                  <--- ---ANAC58<---------GLK1(2)            <---------YAB1         <---------ZAT2 <----------DOF2  ------- ---ANAC58--------->ARR11(3)         <---------AHL20(2)       <-------GAMYB <---------DAG2  ------->GAMYB   gagccgtttttagattttccagtcttaaaatttcagtttttatttttgcccatgtattgttgggagttgggactatggccttttgtttgtataaccgaaa  17474200                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                    <---------ARR14(2)                                            <---------ANAC46                        --------->ARR14(2)                                            <---------ANAC55(2)              <---------ANAC58                                            <---------ANAC58                 <---------ANAC58                         <---------AHL20(2) --------->ANAC55(2)             --------->STY1(2) -------ID1              --------->AHL20(2) <---------ANAC58 --------->ANAC55(2)   <---------RAP2.6(3) --->DOF2          <---------YAB1    <-----------GT1      <---------AHL20(2)<---------STY1(2)  <-----   gaacaaaatactgctacaaatatgaaaataaatacaatatttccatgcgtgattttgtattttatgtgataacattcttgctagccgatttggctagctt  17474300                                                                                               ------                                                                                               ------                                                                                               ------                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                                                        --------->MYB52(2)        <---------YAB1                          <----------DOF2                   <---------ANAC58 -----DOF2                    --------->RAP2.6(3)             ---------->DOF2     <---------ANAC58   ttggactaatgtcattgtctacttctgactcttacggctcaaaaactaagcttttgtagtttgaaaaagataacttatagtttgacttgttagctacaag  17474400  Previous    Next  AGI:  At5g43440.1    Description:  2-oxoglutarate-dependent dioxygenase, putative. similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G43450.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62402.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 17472461    to: 17473885    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g43450.1    Description:  2-oxoglutarate-dependent dioxygenase, putative. similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G43440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66433.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 17474353    to: 17476025    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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