Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------YAB1                                        --------->YAB1        --------->AHL20(2)                                       <---------YAB1        <---------AHL20(2) ----GAMYB                            <---------ARR11(3)     --------->AHL20(1)  --------->AHL20(2) --MYB46(1)                          --------->YAB1          --------->AHL20(2)  <---------AHL20(2) -----DEAR3(2)                      <---------YAB1           <---------AHL20(1)  <---------ICU4 --MYB83                            --------->ICU4       <---------AHL20(2)      --------->ATHB51   < ----DREB2C(2)        <-------TEIL<---------ICU4<---------ICU4<---------AHL20(2)--------->ICU4      < ----MYB46(3)  --------->TOE2(3)  --------->YAB1--------->ATHB12              <---------ICU4      <-- ----HVH21  --------->ANAC46     <---------ATHB12        --------->AHL20(2)  --------->ICU4  <-------   gtcgatttcattccaaaccatagattcatgctcgaatcatgatcataagattattgcatataatttattttcatacatactaattatttcttatactttg  17452200                           <---------ARR11(3)                          <---------CCA1(2)                   <---------YAB1                                                  ------>ZmHOX2a(1)      <---------MYB52(1)--------->AHL20(2)                                    <---------GLK1(1)     --------->TOE2(3)  --------->YAB1                                        --------->GLK1(1) <----------DOF2 --------->YAB1                                    ------>ZmHOX2a(1) ---------ANAC58 <---------ICU4                         <------MYB46(1)       <---------At4g35610 ---------ANAC58--------->ICU4                          <------MYB83          --------->At4g35610 ---------GT1 --------->YAB1         <---------CCA1(2) --------->MYB59--------->TOE2(3)         ----- ---DOF2     --------->ICU4--------->ARR11(3)        <---------MYB52(1)------>ZmHOX2a(1)  --------->ZAT6   ttactttcgttagaaataatcatgaattatatctcgctcatttcttcttgcccttgttaggtttctctccttcctcaaggagctcctccaaaacactatc  17452300                                                              <---------ARR14(2)                                                          <------ZmHOX2a(1)                                                       <------NtERF2                                                     --------->ALFIN1                                                     <---------ANAC46                                                     <---------DEAR3(1)                                                    <------NtERF2                                                   <---------ATERF1(1)                                                  --------->ALFIN1                                                  <---------DEAR3(1)                                                 <------NtERF2<---------ARR11(3)                                                 --------->ATERF1(1)        <------NtERF2                                               --------->ALFIN1<------ZmHOX2a(2)                                               <---------ANAC46--------->CCA1(2)                                               <---------DEAR3(1)          <---------MYB46(3)                                            <---------DEAR3(1)--------->AGP1<-------GAMYB                                            --------->ALFIN1  --------->ARR14(2)                                     ---------->DOF2--------->ATERF1(1)   <---------ANAC46                                   >>>>>>>>>TBF1<---------ATERF1(1)       <---------DREB2C(2)                                >>>>>>>>>TBF1 --------->ATERF1(1)         <---------RAP2.6(2)                          --------->HSFB2a(2) <------NtERF2   --------->ARR11(3)            <--------                          <---------HSFB2a(2)<---------ATERF1(1)          <---------DEAR3(1)--------- ---->YAB1              <---------ANAC46--------->At4g35610 ----------->ARR10--------->ALFIN1 <------   atccaagtactcaaattcaaaaacttgcctagaagaagaagaagcggaggcggaggcggaggaagatccagccatggcggtggaagaagagacaccactc  17452400                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                          <---------SPL7                                                                                          <---------RAP2.6(3)                                  <---------ANAC58                                       <---------ANAC58                                  <---------ANAC46                                       <---------ANAC46                                  <---------AtLEC2            <-----------HVH21          <---------ANAC58                                  <---------ANAC58           <------MYB83              ------>NtERF2                              <---------At4g35610            <------MYB46(1)        ------>ZmHOX2a(1)                          <---------ICU4                 --------->At4g35610        <---------At4g35610 -ALFIN1                  <------ZmHOX2a(1)              <---------ZAT2             --------->At4g35610 >AtMYB61 --------->YAB1<---------TOE1(3)                --------->ZAT2       --------->At4g35610 --- ---ALFIN1<---------ICU4<---------TOE2(3)             <---------At4g35610     <---------ATERF1(1)<---   cccatgttatactcatgagggaagttaaggattgctgcttggcctctcatggagtaagcagcttggtcataggctctagccgcttcctctgccgtatcga  17452500                                               --------->ZAT2                                               --------->At4g35610                                         <---------ARR11(1)                                         <---------ARR14(2)                                         <-----------ARR10                                         --------->ARR14(2)               ------->MYC3              ------->TEIL            <---------ALFIN1            <---------CCA1(2)          <---------ALFIN1            --------->TOE1(1)        ----------->RAV1(1)       ------->TEIL <---------At4g35610     --------->ANAC46             --------->ARR14(2)     --------->ANAC58             <---------ARR14(2)                                 <---------MYB52(1)     --------->ANAC58             --------->GLK1(2)                                 --------->LBD16 ------->KAN4(2)                 <---------CCA1(2)                                 --------->ANAC46 < -------HSFB2a(1)                <---------GLK1(2)    <-----------ARR10            --------->LBD16 -- -------HSFC1(2)   <---------At5g28300--------->ANAC55(2)                         <---------LBD16  -- ------>HSFC1(2) <-------TEIL --------->HSFB2a(2)     <---------ARR14(2)          --------->LBD16  -- -------KAN4(1)<-------MYC3   <---------HSFB2a(2)     --------->ARR14(2)     <---------GLK1(1)  <---- ------>KAN4(1)------->MYC2   --------->LBD16 <-----------RAV1(1)     --------->ATERF1(1)   <-------- ------>HSFB2a(1)--------->WRKY38(1)  <---------ANAC55(2)<-----------GT1     --------->GLK1(1)  ----- ------TOE1(2) <-------MYC2   ------>ZmHOX2a(1)<---------ZAT2        <---------ATERF1(1) <----------DOF2   acgttccaagccacacacgttcaccgtgcttcctcgaatctcgtatctctgctgcatattttccccaaggtcgtctccgaactccccggtactttccatg  17452600         ------>NtERF2        <---------ALFIN1      <-----------HVH21     --------->DEAR4(1)     --------->At1g77200     --------->DEAR3(1)     <---------ETT(1)     --------->DREB2C(2)     ----------->HVH21                         <---------ANAC46    --------->DEAR3(2)                         <---------ANAC58    <------NtERF2                              --------->ANAC55(2)   ------>NtERF2                         <---------DAG2   <---------ATERF1(1)                   <----------DOF2 <------NtERF2                     --------->YAB1 ---------ATERF1(1)                <---------ICU4 ------->ANAC58                  <---------AHL20(2)                      <---------ANAC46 ------->ANAC58               <---------ARR11(3)                         <---------ANAC58 ------->ANAC46               --------->AHL20(1)                         <---------ANAC58 -----ZAT2                   <---------CCA1(2) <---------ANAC55(1)  <---------ARR14(2) ---------AGL1            ------>ZmHOX2a(2)    <---------ANAC58     --------->ARR14(2) ------------>CBF ---->ZAT2    <---------ALFIN1--------->AHL20(2)                 <---------ANAC46<-----------RAV1(1)<   ctcggcaccgacacctcgacctccttgatccatatattaatgactttttgcgtgtttgtatgtgtttgtgtataggcgtgagaatgttggacaatgaaca  17452700               <---------ANAC58               <---------ANAC55(2)               <---------ANAC55(1)               <---------ANAC46               --------->ANAC55(2)     <---------ANAC58               <---------ANAC58        <---------ANAC46          <---------ANAC46             <---------ANAC58          <---------ANAC58       --------->ALFIN1          <---------ANAC58     <---------ANAC58                                               -------      <---------ANAC58         <---------O2                                                  <------NtERF2      <---------ANAC58         --------->O2                   ----------->HVH21              --------  --------->KAN4(1)            <---------ANAC58          ------->MYC3               <---------AHL20(2)  <---------KAN4(1)      <---------ANAC46                <-------MYC3 <----------DOF2        -------- ------------CBF <---------ZAT6--------->ANAC55(2)    <---------ANAC55(1)          <-----------TBP   aggattgttcttgcgtttcgtgttatctcgtagacgtgtttgtgtgtttttctgttacatgtgtttgacgggctttgtttgggaaatttataggcaggga  17452800                         ------>MYB46(1)                --------->YAB1            --------->ICU4                                                              <------ZmHOX2a(2)        <---------PCF2   ------>MYB83                                                  --------->ARR11(3)        --------->TCP15(1)  <------------CBF      <---------AHL20(2)                   <---------ARR11(3)     --------->ALFIN1  <---------MYB59   ------>NtERF2                           <------------CBF   <-----------RAV1(1) --------->TOE2(3)<---------ALFIN1                   <---------ICU4 ---->GT1   ------>ZmHOX2a(1)        ----------->HVH21 ---------->DOF2     <-----------GT1  <-------- ->ANAC58  <---------MYB59  <---------ICU4      ----------->TBP         --------->YAB1 --------->AGP1 ->ANAC58 ----------------->AGL1     --------->ANAC46<---------YAB1    <---------AHL20(2)------>ZmHOX2a(2)   aacaaatgtgggtcctaattagaaacctaatattggccctcgacacctctatataatgaaagaatataagtatataataactccattgagatcttaaatt  17452900                                                                            <---------ICU4                                                                           --------->ICU4                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                  <-------TEIL                                                                --------->ARR14(2)             <-----                                    --------->AHL20(2)          <---------GLK1(2)              ------                                    <---------AHL20(2)          <---------ARR14(2)            -------                      <----------DOF2      ---------->DOF2   --------->HSFB2a(2)        --------->MYB46(3)        <---------At4g35610     <---------YAB1               <---------HSFB2a(2)   --------->ANAC46        --------->At4g35610 <---------GLK1(2)          <---------YAB1      <---------YAB1------->GAMYB -AHL20(2)       <-------TEIL--------->GLK1(2)        xxxxxxxxxxxxxxxx>smallRNA(i) --------->ANAC55(1)   tttcttactcagttgaaaattcatcttttagattctgtttaaattcaaagaaatgctatgcttctggattcgtggtcatgtttacaggtaaccacattta  17453000                                            <---------AHL20(2)                                            --------->AHL20(2)                                        <---------AHL20(2)                                <---------AHL20(2)                                                  =                                --------->AHL20(2)                                                  <                              <---------AHL20(2)                                           <---------LBD16                              --------->AHL20(2)                                           --------->HSFB2a(2)                            --------->AHL20(2)                                             --------->ANAC46                            <---------AHL20(2)         --------->AHL20(2)                  --------->LBD16                        <---------AHL20(2)--------->AHL20(2)                         <---------HSFC1(2)                        --------->AHL20(2)<---------AHL20(2)                         <---------HSFB2a(1)                    --------->ATHB51    --------->AHL20(2)                           --------->HSFC1(2) ----------->GT1    <---------ICU4  --------->AHL20(2) <---------AHL20(2)    <----------DOF2    <---- <------MYB46(1)    --------->AHL20(2)<---------AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <------MYB83       <---------AHL20(2)--------->AHL20(2)   <-----------GT1<---------ARR11(3) -------- ----AHL20(2)      --------->ICU4   <---------AHL20(2)--------->AHL20(2)  --------->ARR11(3)--------- --->AHL20(2)      <---------YAB1 --------->AHL20(2)  <---------AHL20(1) <---------CCA1(2)<---------LBD16 -->AHL20(2)    <---------AHL20(2)<---------AHL20(2)  <---------AHL20(2)------->TEIL --------->HSFB2a(1)   atttggtttattttgtatgtaattatttatatatatatatatatatatatatacaaattatttacaaccatatgtatatctttcggactcttcccgggac  17453100  Previous    Next  AGI:  At5g43410.1    Description:  ethylene-responsive factor, putative. Identical to Ethylene-responsive transcription factor ERF096 (ERF096) [Arabidopsis Thaliana] (GB:Q9LSX0;GB:A0MFL8;GB:Q6J9R1); similar to ATERF14 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 14), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G04370.1); similar to At1g04370-like protein [Arabidopsis lyrata] (GB:ABY68420.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 17452238    to: 17452633    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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