Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ANAC58                                           --------->ANAC58                                         ---------->DOF2                                    <---------ANAC58                                    <---------ANAC58                                  <---------ARR14(2)                                <------MYB46(1)                 <-----------GT1                                <------MYB83           <------NtERF2             ---------->DOF2    <---------MYB46(3)     <---------At4g35610        --------->GLK1(1)      <---------AtMYB61       --------->At4g35610        --------->KAN4(1)      --------->ALFIN1        --------->ZAT2                          ------       --------->ARR11(3)      <---------DEAR3(1)      <---------ZAT2                        ------>ZmHOX2a(1)       <---------ARR11(3)    <---------ANAC58     --------->ANAC58                  <-----------GT1       <---------KAN4(2)     <---------ANAC58     --------->ANAC58      <---------ANAC58 <---------ARR14(2) ---ID1<---------ARR14(2)    <---------ANAC46<----------ID1----------->GT1         <-----------GT1<-- -->AG --------->ARR14(2)   <---------MYB46(3)    --------->ANAC46      <---------ANAC58 --------->ARR14(2)   aagagtagggatattcaaagctagagtttttgggtggttcttgtaaagccacaaggcagctgtgtaaaacccttccttgtctgattttccagttcctcta  17441800                                         --------->TOE1(2)                                        ------>ZmHOX2a(2)                                      <---------ARR14(2)                              --------->ALFIN1                                <---------WRKY12                                    <------MYB46(1)                                <---------WRKY38(1)                                 <------MYB83                     <----------DOF2  --------->ARR14(2)                   <------ZmHOX2a(2)       --                   --------->At4g35610--------->ARR11(3)                  <---------ARR11(3)       <-                 <------ZmHOX2a(1)   <------ZmHOX2a(1)      --------->ANAC58       <---------AtMYB61-           <---------ZAT14      <---------WRKY45  --------->ANAC58        --------->ARR11(3)--------- ----->HVH21     ==============================HOX2a_HOX2a  --------->ANAC58  --------->At4g35610---- -------ALFIN1<---------At4g35610---------->DOF2  --------->ANAC58    <------ZmHOX2a(2)    <---------ANAC46   acacctctgagattgcagaggagcttcaacgtagtcaaaggatcgtgagaccaagaaatggccagcctttggatcagatcatcggaaggtgtgtctggga  17441900                                            ------->MYC3                                            <-------MYC3                                           <---------O2                                           <---------TGA1a                                           --------->TGA1a                                           --------->O2                               --------->LBD16<---------DEAR3(1)        >>>>>>>>>TBF1         <---------HSFB2a(2)                         <-----------RAV1(1) <------ ------->ARR14(2)             --------->LBD16--------->ALFIN1           ----------->RAV1(2) <-------- --------ARR14(2)            <---------HSFB2a(2)                --------->SPL7 --------->ARR14(2) -------->CCA1(2)            <---------LBD16--------->TOE1(2)  <---------MYB52(1)     <---------TOE1(2) >HSFB2a(2)                  --------->HSFB2a(2)              <-----------HVH21<---------ARR14(2) ------->ARR10      <---------O2  <---------MYB46(3)         --------->ANAC46<---------MYB46(3)   cgatatggaagaagaaatcgagacatgggttcccggaggttagaaacgtgggcgagaagttttccgtcagacccatctgtggttcttctaggtttagtgt  17442000                                                            --------->ALFIN1                                                          <------MYB46(1)                                                         --------->DAG2                                                         <---------AtMYB61                                                     --------->ANAC58                                                     --------->ANAC58                                                    <------NtERF2                                                   ------>NtERF2                                                   <---------ATERF1(1)                                                  ----------->HVH21                                                  --------->DEAR3(1)                                                  <---------DEAR3(1)                                                 --------->ATERF1(1)                                                 --------->RAP2.3(1)                                                 <------NtERF2                                                <---------DEAR4(2)                                                <---------ORA47(2)                                                ------>NtERF2<---------MYB46(3)                                                <---------ATERF1(1)                                                <---------RRTF1(1)                                                <---------RAP2.3(1)                                                <---------ERF1<---------SPL7                                               <---------RRTF1(3)                                               <---------DEAR3(1)                                               <---------ATERF1(2)                                               --------->ATERF1(2)              --------->ALFIN1                                               <---------RAP2.6(2)         ------>ZmHOX2a(2)                                               <---------RAP2.3(2)      <------ZmHOX2a(1)                                               <---------ANAC46        --------->HSFC1(2)                         --------->At4g35610   <---------RRTF1(2)      <---------HSFB2a(1)                         <---------At4g35610   <---------DREB2C(2)<---------HSFB2a(2)             ---                     <-----------HVH21        --------->RAP2.6(3)<---------TOE1(1)        --------->ANAC58 -----RAV1(1)     --------->ZAT14         <---------AtLEC2<------MYB83 <---------HSFC1(2) --------->ANAC58 -ANAC46     <---------ZAT14 <---------ARR14(2)<---------RAP2.3(3)--------->HSFB2a(2) >>>>>>>>>TBF1   ggcaatttgggagattacactgttgtcatcggaaactggtgtctccatggcggcgacggaaggtggtccgagaaggatcgcagtggaagaagaagccatt  17442100                       <---------WOX13(1)                     <---------MYB46(3)                    <---------YAB1                                         --------->GLK1(1)            <------MYB83                                               <---------ANAC46            <------MYB46(1)                                           >>>>>>>>>MYB98        *TSS         --------->CCA1(2)                                           --------->MYB52(1)<---------ATHB12 ------->DOF2    <---------AtMYB61         <----------DOF2      ---------->DOF2      --------->WOX13(1)   gaaagagagagatttggtgatggtgattgtctcaagggtttttgactttgaagctagggtttgtgtaaaagtaacggatagctatgtcaatcaattggaa  17442200                                                                                                    >                                                                                           ------>ZmHOX2a(1)                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR11(3)                                                                                       --------->AGP1                                                                                       <---------ARR14(2)                                                                  <---------ANAC58     --------->ARR14(2)                                     >>>>>>>>>>GT-3b       --------->AHL20(2)          <---------ARR11(3)                                  ----------->GT1          <---------AHL20(2)    --------->ANAC58 <--                                ---------->DOF2            --------->ATHB51      --------->ANAC58 ---                            <---------HSFB2a(2)       <---------YAB1         --------->ANAC58    ----                            --------->HSFB2a(2)   --------->ARR11(3)         --------->ANAC58    ----                        <----------DOF2           <---------GLK1(2)     ------>NtERF2  <---------GLK1(2)       --------->GLK1(1)<---------DAG2        ---------->DOF2     <---------ANAC58   ----------->ARR10   gagtaagagaaaccctaagacatcaactttatagaaaagaaaaatacaaaaagattatgaattatttagcttggcgaccaagtaagctagatccttcaaa  17442300                           <---------HSFB2a(2)                           --------->HSFB2a(2)              --------->TOE2(3)                       <---------AHL20(2)       <---------WOX13(1)            --------->ATHB51            --------->AHL20(2)               <---------YAB1 <---------DAG2   --------->ICU4      ----------->GT1  --------->AHL20(2)    --------->AHL20(2)      --------->YAB1 >>>>>>>>RAP2.2   <---------YAB1             <---------AHL20(2)     <---------ATHB12 -------ARR11(3) --------->ARR11(3)       --------------->AGL15  <---------AHL20(2)    --------->AHL20(2) ------>ARR11(3) <---------ARR11(3)       =========================================================== ----->RVE1(1)  --------->CCA1(1)         <----------DOF2<-----------GT1     <---------YAB1        <- ----->CCA1(1)  --------->RVE1(1) <-----------RAV1(1) --------->YAB1<---------YAB1     <---------AHL20(2)   tatctaaatggttataaaatatcatttttttagaaaatgttgttcttttaattgaagtataacctttttaatcatagacattattgtttttaatttgtat  17442400                                                    <---------ICU4                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                   --------->ICU4           --------->AHL20(2)          --------------->AGL15   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------AHL20(2)          <---------------AGL15  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      <<<<<<<<<MYB98          ------->TEIL    ----------->GT1 ------->TEIL     --------->TOE2(3)   <---------AtLEC2   <---------LBD16<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ---- ======================================================MADS_MADS                         <----------DOF2 ----------GT1    ------->TEILxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           <---------LBD16  <-------   ttttctatgttaaaaaaatgtatgttagcatgtatcaaaaactaattggggaaaaaattacatgtatcaaaaactaattggggaacaacttcttttatat  17442500                         ---------->DOF2                       <------ZmHOX2a(1)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <----------ID1              --------->LBD16             <---------ANAC58          ------------------>SPL14   <----------DOF2         <---------MYB52(1)         <---------GLK1(1)          <---------ANAC58 --------->ZAT2 ------->GT1 <---------ANAC46       <---------ANAC58 --------->At4g35610              ---------->DOF2 --AHL20(2)  <---------ANAC58    <--------P          <---------At4g35610  <---------TOE2(3)   tgaaaaactaggtttccgtacaagaggaaaagagggtagcttttgcaagagcatcagcttgccgattgttttctctaagaatgaaattgaaagaacaaca  17442600                                         --------->REM1(2)                                        ----------->HVH21                                       --------->LBD16                                      <---------ANAC55(2)                                     <---------LBD16                          <---------ANAC58                          <---------ANAC58               --------->ANAC58   <---------GLK1(1)               --------->ANAC58   --------->ARR14(2)              --------->DAG2      <---------ARR14(2)             ---------->DOF2<---------ANAC46           --------->ARR11(3)--------->REM1(2)                   <---------MYB52(1)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            ------>ZmHOX2a(2)                      --- ---------->DOF2          <---------ANAC46               --------->ARR14(2)                     <---- xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ANAC46   <---------ARR14(2)   <----------DOF2 -------   agtgaaagtagaagataaagcaaggatgtcgtgtagaatcccgtgaagagttgcaattggatcggcccttactcacatctctttcgcttcagactcgtta  17442700  Previous    Next  AGI:  At5g43390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13210.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70061.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69580.1); contains InterPro domain von Willebrand factor, type A (InterPro:IPR002035); contains InterPro domain Uncharacterized conserved protein UCP015417, vWA (InterPro:IPR011205) Range:  from: 17440027    to: 17442192    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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