Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ---------->DOF2    --------->TOE2(3) ----------->RAV1(1) ------->At4g35610 --------At4g35610                <---------AHL20(2) ---->At4g35610                   --------->AHL20(2)                                          ------- >GLK1(2)                      --------->YAB1        --------->LBD16                      --------->MYB46(3) -ARR11(3)             <---------HSFB2a(1)          --------->HSFB2a(2)               ----------->HVH21 >ARR11(3)             --------->HSFB2a(1)         <---------LBD16            <---------ARR14(2) >ARR14(2)            <---------KAN4(2)            --------->SPL7             --------->ARR14(2) -ARR14(2)  ---------->DOF2 <----------DOF2      <---------SPL7      <-------TEIL ------>ZmHOX2a(1)   cagcaacattaaaagaaagaagagaattttctttgataaatttcattttctcgtccggagattgaagcatgttcatcccaaatcctctatgacccatcaa  17396100                                                                                       <---------ARR11(3)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(1)                                                                                       --------->ARR11(3)                                                                                       <---------AHL20(2)                                                                                    --------->YAB1                                                                                   <---------ATHB51                                                                          --------->YAB1                                                                          <---------ICU4                                                                         <---------ATHB12                                                                        ------>MYB46(1)--------->AHL20(1)                                               <---------ALFIN1         ------>MYB83--------->AHL20(2)                                   --------->YAB1  <----------DOF2     --------->WOX13(1)                           <---------ANAC58    XXXXXXXXXXXXXXXXXXX>MIR172B*    --------->MYB46(3) -->YAB1                   <---------ANAC58 --------->MYB46(3)  --------->ANAC46   <---------ATHB12   aacaaatttagggaaaacaatagcctcttgcttcttatcatcttcaacaacacctttaaaatcaacacaaaaccaatcataaccaataatatattaacaa  17396200                                             --------->YAB1                                            <---------YAB1                                       <---------ANAC55(2)                                       --------->ANAC55(2)                <---------AtLEC2       ----------->RAV1(2)                <---------ANAC58     <-----------GT1                <---------ANAC58 <---------YAB1                <---------ANAC46 <---------AHL20(2)               ---------->DOF2  --------->MYB52(1)             --------->ICU4           <---------ARR14(2)   aaaaaaacagaagtttttgcatggagccatttgatattattacctgatgataacatggcagaactagataaagacaatgtcatagtttcaagagccatgg  17396300                                                                     <-----------GT1                                                                    --------->KAN4(2)                                                                   <---------HSFB2a(1)                                                                   --------->KAN4(1)                                            --------->ARR11(3)     <----------TaMYB80                  --------->ARR11(3)        <---------ARR11(3)     <---------KAN4(1)                  <---------ARR11(3)       --------->YAB1          --------->HSFB2a(1)         <---------ANAC58       --------->CCA1(2)                 ---------->TaMYB80         <---------ANAC58   <---------TOE2(3)        --------->At4g35610     <---------ANAC58      ---------->DOF2<---------YAB1 <------ZmHOX2a(1)     <---------ANAC46<---------AHL20(2)   <---------TOE1(3)       <---------KAN4(2)                 <     <---------ANAC58--------->AHL20(2)   <---------TOE2(3)  ---------->DOF2       ---------->DOF2  -   tttagtttcttgcgaacaaagatttatattaaagaaatgggtttaagataatatgagcaggacaaaagaatattccattcgatacaaaagaagaatgctc  17396400                            --------->YAB1                            <---------ANAC58                           --------->ICU4                         <---------DAG2                           <---------ATHB12                       <----------DOF2                      --------->ANAC58                         --------->ARR11(3)<---------AHL20(2)               --------->ANAC46                 <-----------RAV1(1)   <---------ANAC58        <------ ---------ARR11(3)    --------->ANAC46      <----------DOF2    <---------ARR11(3)--------->AHL20(2) -------->ARR11(3)    --------->ANAC58 <----------DOF2     ---------->DOF2      --------->AHL20(2)   tagatatcgaatggaatactccattcgcaataatcttcaagcttttctttttgttggctctaaaagaacttttcttgttgaattttattctatctgattt  17396500                                                                                                    -                                                                                                  ---                                                                                           ------->MYC2                                                                                           <-------MYC3                 --------->HSFB2a(2)                                                       <-------MYC2                 <---------HSFB2a(2)                                                       ------->MYC3                <---------LBD16                                                           <---------O2      <----------DOF2                                                                     --------->O2     *TSS--------->AHL20(2)                                                               <---------TGA1a   --------->ARR11(3)  --------->KAN4(2)                                                  --------->TGA1a   <---------ARR11(3) --------->KAN4(1)                        <---------AHL20(2)         <---------ANAC55(2)  --------->GLK1(1)   <---------KAN4(1)  --------->YAB1---------->DOF2                    --------->ANAC46  <---------GLK1(1)  <------ZmHOX2a(2)   <---------AHL20(2)----------->GT1                --------->ANAC55(2)  <---------CCA1(2) <---------ARR11(3) <-----------TBP =============================================bZIP_DOF ----DOF2<---------AHL20(2)<----------DOF2        --------->At4g35610           --------->ANAC46 ----   ttggatatcttttaattttctggatcattctttttagttctatttataagacagatggaaagggtttaatttagccaagtagacacaactacacgtgaat  17396600        <---------AHL20(1)        --------->AHL20(2)        <---------AHL20(2)        --------->AHL20(1)       --------->AHL20(2)   <---------AHL20(2)   <---------AHL20(1)   --------->AHL20(2)   --------->AHL20(1)                     ----------->GT1  --------->AHL20(2)                     --------->MYB59          --------->HSFB2a(2)  <---------AHL20(2)                     <---------TOE2(3)        <---------HSFB2a(2) -------->YAB1                     <---------AHL20(2)            <---------LBD16 ------>AHL20(2)                --------->MYB52(2)        --------->YAB1 ----->YAB1  <-----------GT1  <---------MYB52(1)      <----------DOF2                      --------->ARR11(3)   aaaaataaattttattttcgttttggggttttgttagttaatttaggtaaattcttcttttcatatttctggattgttttttttttccaaaaacatctac  17396700                                             --------->LBD16                         ------->TEIL                                            --------->ANAC58                      <---------REM1(1)                                 --------->YAB1                               <---------TOE2(3)                --------->ANAC55(2)         --------->ANAC58                 --------->YAB1                <---------ANAC55(2)      --------->ARR14(2)                <---------YAB1------>MYB46(1)          <---------TOE2(3)     <---------ATHB12                     <---------WOX13(1)  ------>MYB83   <---------AHL20(2)         --------->WOX13(1)               --------->MYB52(2)<---------------AtSPL8  <---------AHL20(2) <----------DOF2     <---------ARR14(2)  <---------MYB52(1)--------->ICU4     <--  --------->AHL20(2) <---------DAG2<---------YAB1           --------->TOE2(3)<XXXXXXXXXXXXXXXXXXXXMIR397B   aagattaatttttagattacatacttttttgttaatcaagatagaaccgcaaacttctgtatcgttagtagattgctattaatgatgtaccaaatgaagt  17396800                                                    <---------AtLEC2      ----------->GT1                       ------>MYB46(1)     <---------ZAT6     <---------HSFB2a(2) -------YAB1                --------->ATHB12------>MYB83   --------->YAB1     <-----------RAV1(1)   cttataggcagaaaaaaaaaaaaaaaaacttcattgcattggaaccaaatgtttgcatcaattgtagtgtttttcagacattgttggagaagaggctcga  17396900                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                               <------ZmHOX2a(1)                       --------->ZAT6---------->DOF2        <---------LBD16                     <-----------HVH21                 <---------ZAT14           <---------YAB1       --------->ARR11(3)     --------->ZAT14      <---------ANAC55(2)       <---------ARR11(3)     --------->ZAT18                            ---      --------->ANAC55(2)   ---------->DOF2            <---------ZAT18           <---------HSFB2a(2)   tattgaatacatgataaatactctgtcactaaaagatttcaaagcttatctatattgtgtactcaggatactgtcttcttgttcttgaagggagacagta  17397000  Previous    Next  AGI:  At5g43300.1    Description:  glycerophosphodiester phosphodiesterase. similar to SRG3 (SENESCENCE-RELATED GENE 3), glycerophosphodiester phosphodiesterase [Arabidopsis thaliana] (TAIR:AT3G02040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71478.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) Range:  from: 17393962    to: 17396505    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g43310.1    Description:  COP1-interacting protein-related. similar to disease resistance protein (TIR class), putative [Arabidopsis thaliana] (TAIR:AT1G61100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71426.1) Range:  from: 17396819    to: 17402615    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version