Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------TOE1(3)                                     --------->ANAC58                                        <-------                         <---------AtLEC2<---------TOE2(3)                         <---------ANAC46 ------YAB1  ---------->DOF2         --------->ANAC58---------->DOF2      --------->YAB1   <---------AHL20(2)   tgcttagtcatgaagcaaagcgttttggcatgaataggcatgtaaggttgcatattaaagtgtctgagagaaactatcatgtgttccctatattaaaacc  17379800                         <---------ZAT14                                                           --                <---------ARR14(2)                                                                ---                <---------ARR11(1)                                                                <--                <-----------ARR10                                      ------>ZmHOX2a(1)        -----                --------->ARR14(2)    ----------->GT1     <---------ZAT14                 --------->DAG2 <---------At4g35610     --------->ZAT14                  --------->ZAT14                ---------->DOF2 ----GT1  --------->AtLEC2  --------->ZAT6         <---------CCA1(2)   <----------DOF2   --------->MYB52(1)   ctctgcttattcatgccaaatctactcttcactctaggttctgtaatttgctcaaatctctatactcttcatccttttgtttttgaagacataaaggaga  17379900                                                                  --------->HSFC1(2)                                                                  <---------HSFC1(2)                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                        --------->GLK1(1)                                                       --------->ARR11(3)               <---------ATHB12                        <---------ARR11(3)    <----------DOF2                           <---------------AGL15   <---------ANAC58        <---------AHL20(2) --------------->AGL15   <---------ANAC58        --------->AHL20(2)----------------->AGL2 ------->CCA1(2)          --------->AHL20(2) ----------------->AGL3 <----------DOF2 ------>ARR14(2)    <-----------GT1   ---------->DOF2  <---------AGP1 -------ARR14(2)--------->AHL20(2)--------->YAB1       <---------ARR14(2)                         --- ------>ARR10  --------->AHL20(2)<---------YAB1        --------->ARR14(2)                 --------->MYB52(1)   gatttgctttctgatcaataaataaccatataattttcataaaagttaccaaaaacagatctctaagaagctttctctcttccactattcactaacagaa  17380000                        ----------->GT1                      <---------TOE2(3)                              ------>ZmHOX2a(1)                      <---------ANAC46                              --------->TOE2(3)                      <---------TOE1(3)                          <---------ARR11(3)            --------->AtLEC2                                     --------->ARR14(2)            --------->ANAC46                                     <---------ARR14(2)            --------->ANAC58                                     --------->ARR11(3)            --------->ANAC58                                   ----------->ARR10        --------->HSFB2a(2)     <---------------AtSPL8     <------ZmHOX2a(1)           --------->MYB52(2)        <---------HSFB2a(2)     --------------->AtSPL8 --------->TOE2(2)             <---------MYB52(1) ------>TOE2(3)---------->DOF2 ---------->DOF2         --------->TOE1(2)   <-----------GT1          -   ccatagttttctacaagcaaagttaagggtaataaaagtactcacataaaacttcaacctaggagaaaatcctcatttatcttctctgttatttgcagac  17380100                                                        --------->ARR11(3)                                          ------>ZmHOX2a(2)                                          ==============HOX2a_HOX2a                                         <------ZmHOX2a(2)                          --------->TOE1(3)      <------ZmHOX2a(1)              --------->At4g35610        ===============HOX2a_HOX2a             --------->ANAC46           <---------ARR14(2)    <------ZmHOX2a(1)     --------->TOE2(3)  --------->LBD16   <----------ID1  ----------->RAV1(1)  --------->ARR14(2)             <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->DOF2 ----------->RAV1(1)     ------->TEIL >>>>>>>>>TBF1 <---------MYB52(1)  <---------TOE2(3)   ataaaaggacaaaatcagcaacaacatacctcaaaacttatggatcccagaggaagaagaaattgttctgtttttttttttttttttttaagtttacgag  17380200                                                  <-----------GT1                                                  <---------GLK1(1)                                                  --------->GLK1(1)                                                 <---------ARR14(2)                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                <-                                                 --------->ARR14(2)                                --         ------------>CBF               ------>MYB83                           <---------DAG2      <-        --------->YAB1                 ----------->RAV1(1)                     <----------DOF2    ---     --------->WOX13(1)               --------->AtMYB61               <---------At4g35610         <--   *TSS<---------ATHB12    --------->YAB1    ---------->DOF2          --------->At4g35610         <--   ------------>CBF      <-----------TBP------>MYB46(1)             --------->YAB1            -------   taagtttcaatcacaattttcatccacatttatagcaagaccaacaaaaaagataccctctctcattctttcatcagaaaactttttttttggctcacca  17380300         --------->YAB1         --------->ATHB12        <-------TEIL                             --------->PCF2 --------ICU4                                    --------->ARR14(2) ------->ATHB51           <------NtERF2          <---------ZAT18 -------ATHB1            ------>NtERF2          <------ZmHOX2a(1) ------>ICU4            <---------PCF2      --------->TOE1(2)          --------->ICU4 -------ATHB51       --------->ALFIN1    ---------->DOF2     --------->ANAC46---------->DOF2 -------ATHB12       <---------ANAC46  --------->ANAC58   <---------REM1(2)--------->YAB1 ----->CBF        --------->GLK1(2)    --------->ANAC58   --------->ZAT14 <---------YAB1    <--------   ataattcacattcattagagattgtgggggcaaaacccttcaagaaagtaggaccctctcttcacaccatttcattatcaaaagctgtttacagatgtaa  17380400                                            --------->LBD16                                           ----------->GT1                       <---------------AGL15                            <----------DOF2--------->ANAC55(2)                   --------------->AGL15                         <<<<<<<<<NAM      <---------ANAC58                     ----------------->AG                <<<<<<<<<WRKY18            <---------ANAC55(2)      <---------MYB59     ----------->GT1           --------->At4g35610      <-----------GT1              <-----------GT1----------------->AGL2  <-----------GT1   <---------ARR11(3)     <---------ANAC58  <----------DOF2    ----------------->AGL1 -REM1(1)  <---------At4g35610 --------->YAB1                <---------DAG2    -------->P      <-----   gattaaacttctcatctgtcaaaatcatccctttaatattacattccgtaacatttctctctactttttgcctaacacatctaccaaaatcagtaattta  17380500                                                                           <---------TOE2(3)                                                                      <------ZmHOX2a(1)                                 <---------TOE2(3)             ==============HOX2a_HOX2a                        ------>MYB46(1)                        <------ZmHOX2a(2)                        ------>MYB83                          --------->ARR14(2)                      <---------MYB59                         --------->AGP1                    ------->TEIL---------->DOF2               <---------ARR11(3)              --------->ICU4 ------>MYB46(1)                  <---------ARR14(2)       ---------->DOF2--------->AtMYB61       <---------AHL20(2)<-------TEIL           ----------->RAV1(1) ------GT1  --------->CCA1(2)------>MYB83   <----------DOF2   --------->ARR11(3)---------->DOF2    <-   caaaaacccaaaagagatgatgaaccaaacccactaaagttttcatcttttattttgggaataagatccataggactaatgaaaaagagcaacatttgtt  17380600                                                         <---------ICU4                                                         --------->YAB1                                                <---------ARR11(3)                 <------MYB46(1)     <---------DAG2     --------->ICU4         <---------ZAT6              <----------DOF2 <---------YAB1<---------YAB1     --------->REM1(2)  <---------TOE1(3)   --------->YAB1  --------->YAB1  --------------->AGL15 <---------TOE2(3)   <---------ICU4 <---------YAB1 ----------GT1   <------MYB83  <----------DOF2 <---------ICU4 ----------->GT1        ----------->HVH21   ttaaccttgtagagtaagttggtattagggtttctttcacttttactcattatctctgattatgatgttatttttgtatgtgagtgagtgacaatacaaa  17380700  Previous    Next  AGI:  At5g43270.1    Description:  SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor. Identical to Squamosa promoter-binding-like protein 2 (SPL2) [Arabidopsis Thaliana] (GB:Q9S840;GB:Q1EBV0;GB:Q9SMY0); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.4); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.2); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO66157.1); contains InterPro domain Transcription factor, SBP-box; (InterPro:I Range:  from: 17377515    to: 17380203    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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