Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC46                                                       --------->ANAC58                                                <---------At4g35610                                                --------->ZAT14                                                --------->At4g35610                                           --------->ZAT18                                           --------->ZAT14                                           <---------ZAT14                                         <---------ZAT18                                         --------->ZAT14         <---------ANAC58                                        --------->ALFIN1         <---------ANAC55(1)       --------->ANAC46                <---------MYB52(1)        --------->ANAC55(2)   -------->P  --------->MYB52(1)   <---------LBD16    <---------ALFIN1 ------>GLK1(2)------>MYB46(1)     --------->MYB52(1)  --------->ANAC58 ------>ARR11(3)                 --------->MYB46(3)  ----------->RAV1(1) -------ARR11(3)               --------->WOX13(1)  ------>NtERF2 <---------ANAC46 ---------ARR10------>MYB83   <---------AHL20(2)--------->ZAT2   <---------ANAC58  ----------->HVH21 --->GT1    --------->MYB46(3)--------->AHL20(2)<---------ZAT14  <---------ANAC55(2)               --   aatctaaccaggtaaccaaacgactgacttaattaatcaccggtgtgctctgcagccacacaagattacgtttttatgctgggacttgacgacaatagcg  17365700                                                                         --------->ZAT18                                                                         <-------TEIL                                                                       ------->MYC3                                                                       <-------MYC3                <-                             <-----------HVH21                 <---------ALFIN1         <---------At4g35610                        <-----------GT1                    --------->ZAT14    --------->YAB1 <------- ------->YAB1  <-----------RAV1(1)                         <---------ZAT18<---------AtLEC2<---------MYB46(3)   ataagaatatagctagtatgtgggtttaacttgtcatatggcaatagtttgaaaaccacattgcacaacctcatgtgcattgatatttgtagctgttgta  17365800             --------->ANAC58                   <---------AHL20(2)         --------->YAB1                    <---------RVE1(1)                                        <         --------->ATHB12                  <---------CCA1(1)                                        -        <---------YAB1                    --------->ARR11(3)                                      ---      --------->YAB1                      <---------GLK1(2)                                       <--    <---------TOE2(3)                     <---------ARR11(3)                                      <-- ---------DOF2   ---------->DOF2    ----------->GT1 <---------AHL20(2)      ----------->GT1      <--- --REM1(1)   --------->ANAC58       <---------REM1(1)                     ---------->DOF2      ------   acttttaagaatgataggcaaaagtcaaaactaatgtgttgtaagattttttaattcattttgtgtcttcagtttataaagaaaaaacaagtatagacaa  17365900                                                            --------------->AGL15                                                            <---------------AGL15                                                           <-----------------AGL3                                                           <-----------------AG          --------->AHL20(1)                               ----------------->AG          --------->ARR11(3)                               <-----------------AGL2          <---------AHL20(1)                               ----------------->AGL2         --------->CCA1(2)                                 <-----------------AGL1        --------->ARR11(3)                          --------->At4g35610                   ------->TEIL        <---------ARR11(3)                       --------->At4g35610              <-------MYC2      <---------TOE2(3)                          ----------->RAV1(2)              <-------PIF5 ---------YAB1                         ----------->GT1     ----------------->AGL1 ------->MYC3 -------->ICU4                    --------->At4g35610      ----------------->AGL3 <-------MYC3 ------>YAB1                      <---------At4g35610  <---------At4g35610        ------->MYC2 -------ICU4                   <------NtERF2  <---------ATHB12    <---------TOE2(3) <-------TEIL ------HAHB4                   <---------At4g35610  <---------ZAT14               ------->PIF5 ------ATHB12                  --------->At4g35610  --------->ZAT14               <-------MYC4<------ --->WOX13(1)                <---------DEAR3(1)  <---------At4g35610    <---------YAB1---------------   tcatttttaagatatattgagaactgttgagtcggcagaagaagtgaaatcatctgcagtagccaattttggttatgttaagcacgttcatgtacccttt  17366000                                                                      ------>ZmHOX2a(1)                         <---------DAG2                              --------->TOE1(3) ------------>CBF  --------->YAB1         <----------DOF2                             --------->TOE2(3)----------->RAV1(1)  <---------ICU4      <---------ALFIN1                               <---------ANAC55(2) ----DOF2           ------>NtERF2           <---------DEAR3(1)      ----------------->AGL2      ----- >AtSPL8           --------->ANAC46    <---------RAP2.3(3)    --------->YAB1       ----------->RAV1(1)   agaatcatcactcgtagttcgacaccacttttccatttttgagggctcggctatgtgtttccaaacatattccttaaccagaatgccacaacaatacata  17366100                                                      <---------MYB52(1)                                                 <---------ARR11(3)                                                 --------->ARR11(3)                  <---------AHL20(2)             --------->GLK1(2)                        <---------ANAC46                  --------->AHL20(2)      --------->TOE2(3)                               <---------ANAC58               ------>MYB83               --------->TOE1(3)                             ------>ZmHOX2a(1)             <---------MYB59              --------->YAB1   <-------GAMYB      --------->YAB1       --      <---------ARR11(3)     <---------AHL20(2) --------->RVE1(1)             <---------AHL20(2) ====    *TSS--------->YAB1<-----------GT1   <---------ARR11(3)----------->GT1     --------->AHL20(2) ---- ---->AHL20(2) ------>MYB46(1)      --------->YAB1  <-----------RAV1(1)    --------->YAB1 <---------ANAC58   taatacaaaatcataccaaattatatactatttattcaacataatcttaaaaatctgttggggttatatgagagcattaataatatgctcctgcttgtat  17366200                                <-----------HVH21                            <-------TEIL                            ----------------->AGL1                          <-------PIF5                          ------->PIF5                         --------->ANAC46                         --------->ANAC58                         --------->ANAC58                         <---------TGA1a                         --------->TGA1a                         --------->O2                       <---------ALFIN1                      =============MYC_MYB                      ------->GAMYB                    <-----------GT1                     --------->DEAR3(2)   <---------AtMYB61                     --------->MYB46(3)  <---------MYB52(1) --------->AHL20(2) --------->ANAC58   <---------MYB46(3)                    <---------ICU4 --------->GT1      --------->ANAC46   <---------DREB2C(2)                   --------->YAB1 ==================================bZIP_DOF<---------MYB46(3)         --------->GLK1(1)             < ------>DOF2        --------->ANAC58   <---------DEAR3(1)             ------->TEIL                  <   aaagaaaataagaaaatggtgcaacccacgtccatttcaggccggtggttttgtttattactccaaaacatgaactccattataacccaaaatcgaaaac  17366300                                                                                                  <--             <---------ICU4                                                       <<<<<<<<<<<<<<<<<LFY          --------->YAB1                                                    <---------ANAC46 -------- ---------DAG2                      --------->AtMYB61                  ---------->DOF2       <------- ----------DOF2        --------->YAB1    <----------ID1              ---------->DOF2      <---------ANAC46   ccctttactaattcataatcaactatcaccattttcgaccaaaaaaacaaaaatggtattgggtcttcggacaaagagccgtagagacaatggagtattc  17366400    <---------ARR14(2)                                <---------ZAT14       ----------->GT1    --------->GLK1(2)                                 --------->ZAT14 <---------------AGL15    <-----------ARR10   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)           --------------->AGL15    --------->ARR14(2) --------->At4g35610           --------->AtLEC2<-----------------AGL2 <---------ANAC58 ---------->DOF2         --------->ANAC46           <-----------------AG <---------ANAC58--------->YAB1           --------->ANAC58           <-----------------AGL1 -------MYB52(1)<---------ATHB12          --------->ANAC58         ------>ZmHOX2a(1) ->ARR14(2)   --------->WOX13(1)        --------->MYB46(3)    <---------ANAC58 --ARR14(2)--------->TOE2(3)            ---------->DOF2       <---------ANAC58   --------->MYB52(1)   gttgagtatctaatctcaatcaaagagctaaaaccatggccaacaagccaagtccctgcacaatgcgtccttctcaaatgggaaaacggcgaaaacaatt  17366500                                                                                         ----------->RAV1(1)                <---------ANAC46                                   --------->TOE1(3)    <---------ETT(1)                <---------TGA1a                                    --------->TOE2(3)   --------->SPL7                <---------MYB46(3)                               <---------TOE2(3)  <---------ANAC58                <---------ANAC58                                 <---------TOE1(3)  <------MYB83                ==================bZIP_DOF                    --------->DOF5.7(2)   <------MYB46(1)                <---------ANAC58                             --------->TOE1(3)      <---------ANAC58               --------->ALFIN1                      <---------TOE2(3)       ---------->DOF2              <-----------HVH21   --------->YAB1 <----------DOF2<---------DOF5.7(2)--------->MYB59     ------>ZmHOX2a(1) ---------->DOF2  <---------WRKY12     --------->TOE2(3)     <---------MYB46(3)   caggctccttcatcgcggtcgtgggcaaagacactatcatgttcaacgagtcttttaggctaacattaacgttagaacccaaagttgggtccgacaataa  17366600  Previous    Next  AGI:  At5g43210.1    Description:  endo/excinuclease amino terminal domain-containing protein. similar to endo/excinuclease amino terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G30350.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40743.1); contains InterPro domain Excinuclease ABC, C subunit, N-terminal; (InterPro:IPR000305) Range:  from: 17364795    to: 17365869    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g43211.1    Description:  unknown protein Range:  from: 17365950    to: 17366114    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g43230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46641.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 17366104    to: 17369975    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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