Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   ----------->GT1                                               <---------GLK1(2)                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                        ----------->GT1  <---------ARR11(3)                               <---------ANAC55(2)                  <---------AHL20(2)     --------->GLK1(2)                                <---------ANAC55(1)                <---------CCA1(1)        --------->ARR14(2)                               <---------ANAC46                <---------RVE1(1)        <---------ARR14(2)                               <---------ANAC58               <---------ARR11(3)        <---------AGP1                                   <---------ANAC58               <---------GLK1(2)         --------->ARR11(3)  <---------ANAC55(2)          --------->ANAC55(2) ----ANAC46    --------->ARR11(3)       <------ZmHOX2a(1)    ----------->GT1       ------->TEIL ----- ----ANAC58---------->DOF2            <---------TOE2(3)  <---------AHL20(2)       <---------AtLEC2 <- ----ANAC58--------->YAB1             <---------TOE1(3)<---------YAB1 ---------->DOF2    <---------TOE2(3)   tttatacaactaataaagattttttttggtaaaaacaattaaggatctagattgtttattaatatgtaaaacaaaagtgtgtatgcatgtttacgtattc  17354700                                                                                                    <                                                                                              -------                                                                                             <-------         <----------DOF2                                                                  --------->AHL20(2)     --------->YAB1                          --------->YAB1                              --------->AHL20(2)   <-----------GT1                 ---------->DOF2                                       <---------AHL20(2)  --------->YAB1                --------->TOE2(3)                                       <---------AHL20(1)  <-----------GT1              --------->ANAC58                                        --------->YAB1 ---->YAB1                     --------->ANAC58                                      --------->AHL20(2) --------ICU4                --------->MYB52(1)                              ---------->DOF2---------   atatttatcatcttttgaaaattttgagagcaaacgtaaaagaacaatagaaatgtttctaaaattttgtatatttgcctaaagttttaaaataattttt  17354800                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                         --------->ANAC58                                                                                         --------->ANAC55(2)                                                                                         --------->ANAC46                                                                                         <---------ANAC55(2)                                                     <---------------AGL15               --------->ANAC58                                                     --------------->AGL15               --------->ANAC55(1)                                       --------->ANAC58                                 <---------LBD16                                       --------->ANAC55(2)                           <-----------HVH21                                       <---------ANAC55(2)                          --------->bZIP60(1) --------->YAB1                        --------->ANAC58                   ------->TEIL----------->HVH21 ---------YAB1                         --------->ANAC46               >>>>>>>>>TBF1 <---------bZIP60(1) -->AHL20(2)       ---------->DOF2    ------->TEIL   <---------HSFB2a(2) <---------ARR14(2)        -- --ICU4       <-------TEIL        <---------------AtSPL3       ---------->DOF2 <----------DOF2   ---- >ICU4   --------->AHL20(2)    ---------->DOF2       --------->HSFB2a(2) --------->ARR14(2) <--------   atatcataagtttatatacatataagcgcaaaacaaagtgtacgtaaacaaacttctaaaaacagaaaagaagaagaacctctttgatgtcacggaacca  17354900             <------ZmHOX2a(1)       <----------DOF2    <---------ANAC58    <---------ANAC58    <---------ANAC46 -------->CCA1(2)                                <----------DOF2 ---------GLK1(1)                               <---------ANAC58 --------GLK1(2)                   --------->HSFB2a(2) ------->ARR11(3)                  <---------HSFB2a(2)                                        ------- ------->ARR14(2)                 <---------TOE2(1)                                          <------- --------ARR11(3)                 <---------TOE1(1)                                          -------- --------ARR14(2)              <---------SPL7   <---------ANAC58                     <---------At4g35610 ------->ARR11(1)            <---------------AtSPL3     --------->ALFIN1             --------->At4g35610 ------->ARR10           --------->O2    <------ZmHOX2a(1)                       <---------ALFIN1 -ARR14(2) <---------TOE2(3)--------->ZAT14   <---------YAB1      ---------->DOF2----------->RAV1(1)   agatttgcgttttgaggaatcaatgccaagtgaagtacgagaaggattgtgcttgaaggtgttccatagaaagacatggtatcccacagctatcaacaaa  17355000                                            <-----------GT1                                     <---------YAB1                             ------>ZmHOX2a(2)         --------->ZAT14     ==========================HOX2a_HOX2a             <---------------AGL15    --------->ZAT18        <---------ARR14(2)                                  ------>ZmHOX2a(1) >GAMYB  <---------ZAT14   <---------ARR11(3)                                 --------->TOE2(3)   <-- --MYB52(2)                --------->ARR14(2)                                 <-----------------AGL1*TSS ->MYB46(3)                --------->ARR11(3)   ------>ZmHOX2a(1)       <----------DOF2         <----   ctcaatggcactacaatgctgtctgtgtcgatcttcattctcattttctcctctctctctctctctctctctctctttttcctcaatttggactaatact  17355100                                --------->ICU4                              ---------->DOF2                             <---------AHL20(2)                         ----------->TBP                         --------->AHL20(2)                            --------->GLK1(1)                        <---------AHL20(1)                            <---------ARR11(3)                        <---------ARR11(3)     --------->ZAT18        --------->ARR11(3)                        --------->ARR11(3)     <---------ZAT18       <---------At4g35610            <  <---------YAB1       <-----------TBP --------->DAG2        --------->YAB1             --------->ZAT18 -------GLK1(2)     <------ZmHOX2a(1) ---------->DOF2       <-------TEIL        ---------->DOF2  >>>> -----YAB1<------------CBF ----------->TBP  --------->MYB52(2)       --------->At4g35610<---------ZAT18   gattctaattcgtattgacataggaatatatataaagatgaaaagttagtggacaaatgggattcatagtcagatatcaaatgaaagtagtggacatctc  17355200             <---------ZAT6           <------MYB46(1)     <---------ANAC55(2)           <------MYB83        --------->ANAC46          <---------AtMYB61    --------->ANAC55(2)                    --------->AHL20(2)         <--------P            --------->ANAC58                       <---------AHL20(2)       <-----------RAV1(1)     --------->ANAC58              ---------->DOF2     <---------ANAC58          --------->ANAC55(1)<------NtERF2----------->GT1     <---------ANAC58       --------->ARR14(2)  --------->ETT(1)----------->GT1    --------->DAG2 ------------CBF            <---------ARR14(2)  <---------DEAR3(1)--------->AHL20(2)     <------ZmHOX2a(1) >>>>>>>>>>>>>LFY ----------------------->TaNAC69(2)     <-----------GT1          ---------->DOF2   <   tccattgtcttgttggtgttattttggacgtatacgcaactaattcttggtcggagtattaacaaaagttaaatatttatgggataaagtaggacatatc  17355300                                       <---------YAB1                                     --------->ATHB51                                     <---------ICU4                                     <--------HAHB4                                     -------->ATHB1                                     --------->YAB1                               <-----------GT1                             <---------YAB1                           --------->YAB1                           <--------HAHB4                                    --------->TOE1(3)                          <---------YAB1--------->YAB1                       --------->TOE2(3)                  <----------DOF2   <---------ATHB51                 <---------ANAC55(2)           -- <---------At4g35610  --------->ANAC55(2)     ---------->DOF2        ----------->GT1               -- --------->At4g35610<-----------GT1 --------->ICU4            --------->ANAC55(2)           <-------- ---------ARR11(3)<---------DAG2    <---------YAB1            <---------ANAC55(2)   --------->AtLEC2   aacatctgactatacactcactttacctattattaacaattattatagtaaagcactatctaataggtatcatgtaaaacattaacatgcacaagtgtaa  17355400            --------->YAB1         --------->YAB1    <-------GAMYB   <------MYB83   <---------MYB46(3)                             <---------AHL20(2)   <------MYB46(1)                                --------->AHL20(2)   ----------->GT1                            <----------DOF2                                  <----- ------->MYB111(1)                           ------>ZmHOX2a(2)                                 <----- ------->MYB111(2)                         --------->ARR11(3)       ----------->HVH21      --------->GLK1(2) -ZAT6  <---------YAB1         <-------TEIL<---------ARR11(3)    ------->TEIL       <----------DOF2<-   gtagttggttataataaaaacatatatcaaatattcatatgtattgatctttttaatttgttgtatgtatttgacattgaatttgactttgagaattttt  17355500     <---------DAG2      <---------YAB1     <----------DOF2--------->ANAC46                             <-----------GT1 ----AHL20(2)     <---------ALFIN1                            <---------AHL20(2) ----YAB1    <-----------GT1                    --------->AHL20(2)            --------->YAB1 ----------GT1  ------>ZmHOX2a(1)      ---------->DOF2<---------MYB52(2)      --------->TOE2(3) <----   attaccactttatttttcctgcacatcatgtttctgaatttcaaagtagattaaaaactaacatttttttctgttcacattcttaattgttcttatatat  17355600  Previous    Next  AGI:  At5g43180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66486.1); contains InterPro domain Protein of unknown function DUF599 (InterPro:IPR006747) Range:  from: 17353558    to: 17355100    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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