Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                <----                                    <---------ATHB51                                            -----                                    <---------AHL20(2)                  <---------AHL20(1)     ------    --------->ARR11(3)           --------->AHL20(2)                    --------->YAB1    <------ZmHOX2a(1)    <---------ARR11(3)          <---------AHL20(2)    <---------------AGL15            --------->ANAC46   <---------CCA1(2)            --------->AHL20(2)    --------------->AGL15           --------------- -----AHL20(2)              <---------AHL20(2)       <-----------------AGL3           <---------LBD16 ---->AHL20(2)              --------->AHL20(2)       <-----------------AGL2          <--------------- ----AHL20(2)          <---------AHL20(1)            ================================================ >AHL20(2)             <---------AHL20(2)            ----------------->AGL3    <---------YAB1  <----- -AHL20(2)             --------->AHL20(2)        ---------->ID1     --------->YAB1 <-----------GT1   atttcatatctcttattcaacttattttatttaaataaataatgcaaacttgtcttctatttatagtatttcataatatttgttattaccaggaatggat  17345300   --------->ARR14(2)   <---------ARR14(2) ---->GLK1(1)                                                                        <---------AHL20(2) -----GLK1(1)                                        <------MYB83                 --------->TOE2(3) ---->CCA1(2)                                        <------MYB46(1)         --------->AHL20(2) --->ARR14(2)            <----------DOF2            <---------AtMYB61        <---------ICU4 >AGL15                 <---------ICU4         <---------TOE2(3)            <---------AHL20(2) ------ --AGL1                --------->ICU4       <---------AHL20(2)              --------->AHL20(2)<------ =MADS_MADS----------->GT1 <---------AHL20(2)  <---------TOE1(3)           <---------AHL20(1) ------- ----ARR14(2)     --------->YAB1    <----------DOF2 --------->MYB59     --------->AHL20(2)-----------   atgcatatttgcacagaaaattgtaatctttatttgctctttatattttaaggtttggttttgagttttttttataaaataatttcttaaatttcaataa  17345400                                                                                         --------->ARR11(3)                                                       ----------->RAV1(1)               <-----------GT1                                                       ------------>AtMYB77             <---------ICU4                 --------->ANAC58                     --------->ANAC58            --------->ANAC58                 <---------ANAC55(2)                  ----------->HVH21           --------->ANAC46   <---------ANAC55(2)                         ---------->DOF2                    ----------->GT1  --   --------->ANAC58 <---------TOE2(2) <---------AHL20(2)                          --------->ANAC58---   --------->ANAC58 ------->TEIL  --------->AHL20(2)  --------->ANAC58            --------->ANAC55(1) --->AHL20(2)    --------->ANAC55(2)  --------->AHL20(2)                          --------->ANAC55(2) ---ATHB12------------>CBF--------->ANAC58  <---------TOE2(3)  <-----------GT1    --------->YAB1 ---- -->AHL20(2)     --------->ANAC58 <---------AHL20(2)--------->CCA1(2)  --------->ANAC46--------->ICU4 ->CBF   --------->ANAC46 --------->ANAC58---------->DOF2  <-------GAMYB    --------->TOE2(3)   <----   ataatacgcatacacaattacgcatgttaagccatattaattaataaaggaaagagacgacagttataccctcacaaaacttaaacgtaattatctcccc  17345500                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               <-----     <---------ALFIN1                                                                        <------NtERF2 ------>MYB83                                                                               --------- ------>MYB46(1)                                                                            ------>NtERF2 ------->AtMYB61           <------NtERF2                                                   --------->LBD16 ------>ZAT2              --------->LBD16                                                  <---------LBD16 -->NtERF2               --------->DEAR3(1)                                     --------->TOE2(3) -----ALFIN1            <---------LBD16  --------->ZAT6                   --------->YAB1  <---------LBD16   accttccccactctattctcaagttcgccggagatttatactaacactgcaaaattcactcacatttctactaaaatcaaaaccctagtctcgccgggaa  17345600                                                                                          --------->ZAT2               <---------ARR11(3)                                                         --------->At4g35610         --------->LBD16                                                                  <---------At4g35610        <---------ANAC55(2)                                                        --------->At4g35610        --------->ANAC55(2)                                                        <---------At4g35610     <---------ARR14(2)                                                          <------NtERF2     --------->ARR14(2)                                                        --------->ETT(1) ---->GLK1(2)  --------->GLK1(2)                              --------->ICU4   <---------ANAC46 ----GLK1(2)   --------->ARR11(3)                         ------------>CBF  <-----------RAV1(1) --->GLK1(1)   <-----------ARR10                    --------->MYB52(1)  ------------>CBF  <---------ZAT2 ----GLK1(1)  --------->RVE1(1)                     --------->YAB1  <---------GLK1(1)----------->HVH21 >LBD16 ----------->GT1   ------------>CBF     ------------>CBF--------->YAB1<-----------HVH21 ------   tctctcaaatccgtaaaaatcttctctattcaatctctccttgctcacattcaataacgaggcaatgttgatttctcaatgtcggagatgacagctgcaa  17345700                                                                                   --------->ANAC46                                                                                   --------->ANAC58                                                                        ------>NtERF2                                                                        --------->ORA47(1)                                                                        --------->ABI4(1)                                                                       --------->RAP2.3(2)                                                                       --------->RAP2.3(3)                                                                       --------->RAP2.6(2)                                                                       <---------ATERF1(2)                                                                       --------->ATERF1(2)                        --------->DOF5.7(2)   <---------DEAR3(2)       --------->DEAR3(1)                       --------->TOE2(3)    <---------MYB52(1)        --------->ATERF1(1)                       --------->TOE1(3)   <-----------HVH21          --------->DEAR4(2)                 ------->GAMYB            --------->DEAR3(1)          --------->ERF1              ---                --------->ANAC58       --------->AtMYB61              --------->RAP2.3(1)         ---                --------->ANAC58      --------->MYB46(3)              --------->ORA47(2)          ---          <----------DOF2           --------->ANAC46                 <---------ATERF1(1)          <--   <-----------GT1    ----------->GT1 <---------MYB55(2)    --------->YAB1         --------->ANAC58 ----->RAV1(1)  --------->ANAC46  --------->MYB46(3)       --------->ICU4<------NtERF2  <---------REM1(1)   caatttcaccttctttcaacgcaaacgttaaacagaacaaaccaccgtcgtttccatcggaatcatcaaatcgccgcccaaaaacacgagatgtagcatc  17345800                                                                                           ==========                                                                                           <---------At4g35610                                                                              <---------ATERF1(1)                                                                             --------->WRKY38(1)                                                                            <---------MYB52(1)                                   --------->YAB1                           <-----------HVH21           --------->At5g28300     <---------ICU4                     ----------->HVH21    <-------GAMYB           <------NtERF2          <---------ATHB12               <---------MYB52(1)       <----------         --------------->AtSPL3  ------>MYB46(1)                <-------GAMYB----------->HVH21         --------------->AtSPL8  ------>MYB83                  <---------MYB46(3)         --------->MYB52(2) ------>ANAC58                  --------->WOX13(1)             ------>ZmHOX2a(2)          <---------DEAR3(2) ------>ANAC58                 --------->AtMYB61              <------ZmHOX2a(2)      <---------MYB52(1) ------>ANAC46                 --------->MYB46(3)    --------->WOX13(1)    ----------->GT1<---------MYB46(3) -------YAB1         <----------DOF2     --------->DEAR3(1)  <---------MYB52(1)     <-----------HVH21   acgataccttggcggtacttcttctttcttccaccaatcatcaccgaagagatgtcaatctccgatcgttactcgaccggtgactccgtcgtctgttgct  17345900                     ======================bZIP_DOF                     --------->ANAC46                     --------->bZIP60(2)                     <---------O2                     --------->TGA1a                     <---------TGA1a                     --------->O2                   <---------ALFIN1                --------->ANAC46             --------->YAB1            <---------ATHB12           --------->ANAC58           --------->ANAC58        <------NtERF2======================bZIP_DOF                                      <---------ANAC58       --------->ANAC58                                                                  <---------ANAC58       --------->RAP2.6(2)                                       <------ZmHOX2a(1)      <---------HSFC1(2)       --------->RAP2.3(2)                            ---------->DOF2                   --------->HSFC1(2)       --------->RRTF1(2)                       --------->HSFC1(2)              --------->HSFB2a(2)       --------->ANAC58 <---------ANAC46        <---------HSFB2a(1)             <---------HSFB2a(2) ==============================MYC_MYB          --------->HSFB2a(1)            <---------LBD16     <- -RAV1(1) --------->WOX13(1)    <----------DOF2 <---------HSFC1(2)--------->ARR11(3)   --------->GLK1(2)   actaatcggccgcaatcaacaccacgtcgtgagtctttagatcgacgagaagtttctaaagcggagaggatgttgttgacttctgggagaagcttgttcg  17346000                 --------->DOF5.7(2)              <-------TEIL            <---------GLK1(2)                                                  <---------ANAC46            --------->ARR14(2)                                                 --------->ALFIN1           <------NtERF2                                                    --------->ALFIN1        <---------LBD16                                                     <---------AtMYB61     <-----------RAV1(2)   <------ZmHOX2a(1)                       <---------ARR11(3)   <-----------HVH21     --------->LBD16   <------ZmHOX2a(1)       --------->ARR11(3) <---------DEAR3(2)     <---------LBD16 <------ZmHOX2a(1)    ----------->RAV1(1) -----NtERF2<---------ARR14(2) --------->TOE2(3)          --------->HSFB2a(2)<---------MYB46(3)   cgtcgtttcaggcggattcgtttactccaggaacattagagaggaggaagacgacttcttcggcaacaatatctaagagtggtggaggtaaacaagagaa  17346100                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                              =======                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                          ------>ZmHOX2a(2)                                                                                         <-----------                                                                              <------ZmHOX2a(1)======                                                                              ===================HOX2a_HOX2a                                                                              =======================HOX2a_HOX2a                                                                      --------->YAB1   --------->ATHB12                   <---------ANAC46                            <---------GLK1(1)  --------->ARR11(3)            <---------YAB1                               --------->ALFIN1     =======================   attgaaactctctgatcaatggcctaggtctctgcaacctagttgtttaagtagtagaagtgtagatttcactgatactaggaagaaattgatcggatct  17346200  Previous    Next  AGI:  At5g43160.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19570.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO63959.1); contains InterPro domain Protein of unknown function DUF566 (InterPro:IPR007573) Range:  from: 17345679    to: 17347923    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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