Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ZAT2                                                                      --------->AHL20(2)                              --------->TOE2(3)                  ------>ZmHOX2a(2)                           ------>MYB83                         <------ZmHOX2a(2)          *TSS                           --------->MYB52(1)                  <---------ARR14(2)       ---------->DOF2                           ------>MYB46(1)                     --------->ARR14(2)    --------->ANAC58                         --------->AtMYB61                    <------ZmHOX2a(1)      --------->ANAC58                         <---------MYB59          ----------->GT1<-------TEIL  <---------LBD16  -----   ggattttgaaacgagtgagattagaaacctaacctcatcttcttcaaggagcttgaaaattgaaggatccattgaaatagctggggaaggcaaagagaga  17338400                                                                     ----------->GT1                     --------->AHL20(2)                              <---------ANAC46             <------NtERF2                                 <-----------GT1                          <          <------NtERF2                                    --------->MYB52(1)                       <   --------->At4g35610              ----------->GT1      <---------MYB52(2)                         <   <---------At4g35610<---------AHL20(2)   <---------TOE2(3)-------->P                             -- ----->DOF2<---------ANAC46 <------ZmHOX2a(1)        ------>ZmHOX2a(1)          <----------DOF2 -----   aagagagctctcggcgtagatgaattaataggaaacagatgttataagattagtcctaaactaacctcatgtcgtttattagctttgttttagcactgta  17338500                                                  --------->ARR14(2)      --------->AHL20(2)                          <-----------GT1                           <--------      <---------AHL20(2)                 <---------TOE2(3)                                  <-------- ---------ANAC46                         <---------YAB1                                     --------- ---------ANAC58                    --------->MYB52(2)                                   ----------->TGA1 ---------ANAC58        --------->MYB52(1)        <---------ARR14(2)                     ----------->HVH21 -------->ID1   ------>ZmHOX2a(2)   <---------MYB46(3)                     <----------DOF2  <-------- -->TEIL    <---------YAB1        <---------MYB52(1)            --------->ATHB12       <---------AtLEC2   tgtcgtttttaattttgatcgaaaaaaaacgataccgtttgttatggatgagtaacctcatgttgtttattggtgttcttttaaaaactgcatgacgttt  17338600                                 <---------ANAC58                                 <---------ANAC55(1)                                 <---------ANAC46                                                <---                                 <---------AtLEC2                                                <---                   <---------ANAC46                                                              <---      --------->ANAC58           <---------ANAC58                                            <-------      --------->ANAC58      --------->ATHB12               ---------->ID1                    <-------      --------->ANAC46    <----------DOF2                <-----------RAV1(1)             <-------GAMYB      <----------ID1 <---------MYB52(1)    --------->CCA1(2)    --------->ATHB12        <---------MYB46(3) -ANAC58           <---------ANAC58       <---------ARR11(3)<---------ANAC46            --------->MYB52(2) -ANAC46           <---------ANAC58 --------->REM1(2)<---------DAG2                   <---------MYB52(1) -->GT1          <-----------HVH21 --------->ALFIN1  <----------DOF2           --------->ANAC58  <--- -ANAC58 ---------->DOF2  <---------DAG2  --------->ARR11(3)----------->GT1    --------->ANAC58  <---   aatggaatacgaaaaacgctgtcgtttgctttattgcgtggagagatatatcaaactttatgtcgtttattggttttggttaagcactgtttgttgtttg  17338700                                                                           --------->HSFB2a(1)                                                                      <---------TOE2(3)                                                                     --------->MYB52(1)                                                              --------->DEAR3(1)                                                              <---------ATERF1(2)                                                              --------->ATERF1(2)                                                              --------->RAP2.6(2)                                                              --------->ANAC46                                                              --------->RAP2.3(2)                                                              --------->RAP2.3(3)                                                             --------->ERF1<---------HSFB2a(1)                                                             --------->RAP2.3(1)                                                             --------->ATERF1(1)                                                         --------->ZAT2    <---------HSFC1(2)                                                         --------->At4g35610                                                    <---------ZAT6   <---------DOF5.7(2)                                                <---------ZAT14 <------NtERF2  <------------CBF                              <-------TEIL<---------ATERF1(1) ------AtLEC2                        <-------TEIL <---------ANAC46 --------->DOF5.7(2) ------ANAC55(1)       <---------ZAT14          --------->ZAT14<---------RAP2.6(3) ------ANAC58      <---------------AtSPL8       --------->ZAT18------>NtERF2 --ANAC58          --------->HSFB2a(2)     ---------->DOF2  ------>NtERF2  --------->HSFC1(2)       - --ANAC58   ---------->DOF2     <---------------------WRI1  --------->At4g35610                     < ------ANAC46      <---------HSFB2a(2) --------->TOE2(3) <---------At4g35610           ---------->DOF2 ------ANAC58   --------->ARR11(3)  --------->CCA1(2)    <---------ZAT2  *TSS  <---------DEAR3(1) ---   cgtgtattgagactaaaagttctggtacagagagagagatacatcaaaagtacagtgtaagctgccgccattaacgaagcatcggcgaaaaaagaagatg  17338800                                               --------->ANAC46                                               --------->ANAC55(2)                               ----                                              <---------LBD16                          --------->ETT(1)                                            <---------REM1(2)                        <-----------HVH21                --------->MYB52(1)----------------------->TaNAC69(2)                 <---------MYB52(1)     <---------TOE1(2)           ------>ZmHOX2a(2)                                  <---------SPL7  < -------->ARR11(3)             <---------ARR14(2)                              <---------ZAT14  <---- ---------ARR11(3)             --------->ARR14(2)                            --------->ZAT14    <---- ---->TEIL   <---------At4g35610<------ZmHOX2a(2)   <------ZmHOX2a(2)       <---------ZAT6      -----   aatatcgttggattgagcaaacgtttcttctccgatcgtcgctctcttcacgggatcaacaatgctctcttgaaaacagtgttcaccggtcggaaaccga  17338900            ------>NtERF2                                                       --------->GLK1(1)           --------->LBD16                                                  <---------HSFB2a(2)           ------>NtERF2                                                    --------->HSFB2a(2)         <---------LBD16                                                   <---------ANAC46    <---------GLK1(2)                                                    --------->REM1(2)    <---------ARR14(2)                           --------->ANAC55(2)     <-----------HVH21    --------->ARR14(2)          --------->ANAC58 <---------ANAC58       --------->ALFIN1 ----->GLK1(2)                  --------->ANAC58 <---------ANAC46      --------->LBD16 ---------LBD16                 --------->ANAC46 <---------ANAC55(2)  <---------ANAC58 -----ARR14(2)         <-----------GT1 --------->TOE1(2)              <---------ANAC58 -----GLK1(2)--------->SPL7 --------->ZAT2       <---------ANAC58    <---------LBD16 ---->ARR14(2)   <------ZmHOX2a(2)   <---------ARR14(2)            <-----------GT1   --------->MYB52(1)   ttctcggattctccggccgatcgattcacgagctacgcaaaactgggaatttcgtaatccctcgtgttttctccgtgtcgcgaaatctaacgacgaaggc  17339000                          <---------ARR14(2)                          --------->ARR14(2)                       <---------ANAC58                       <---------ANAC58                    --------->TOE2(2)                   ----------->RAV1(2)                              <---------YAB1         <---------       <<<<<<<<<TBF1--------->TOE1(2)                          ------>ZmHOX2a(1) <-----------GT1 ---------->ID1   -------->P                 ---------->DOF2   <----------DOF2   --------->ZAT6   ttcgtcttcttcttcgaaacaacctgcgtttctacgatggtatttgagaaagctcgaatcacatccttttatgactaagagtatcactacttctgtcatc  17339100                      <---------TOE1(2)                      <---------TOE2(2)            ------>ZmHOX2a(2)           <------ZmHOX2a(2)           --------->GLK1(1)          <-----------ARR10          <---------AGP1          <---------ARR14(3)          --------->ARR11(3)          --------->ARR14(2)                                                                        <          <---------ARR14(2)                                                                        <          <---------ARR11(3)                                                               --------->GLK1(2)         <---------At4g35610                                                      <---------ICU4   --      <------NtERF2  <-----------RAV1(2)                                         ====================      <---------At4g35610                  ---------->ID1        <----------DOF2 --------------->AGL15      --------->At4g35610           ------->TEIL           <---------TOE1(3)     <---------------AGL15 --HVH21 <---------CCA1(2)         <---------CCA1(2)       <---------TOE2(3)    <-----------------AGL2   tatatggctgcagatctcacttctcaggtttttttttgaatctttgtagtttttggaatttagggttctttctcatttcattactaattagagaattttg  17339200             <-----------GT1<------ZmHOX2a(1)            <---------AHL20(2)                                                                      -           --------->AHL20(2)    ---------->DOF2        --------->YAB1                            <-- ---------TOE2(3)         <---------TOE2(3)            <---------YAB1                         ------- ---------TOE1(3)    --------->ATHB12               <---------YAB1                           <------ZmHOX2a(2) -------->DOF2     --------------->AGL15   --------->YAB1      --------->ANAC58             <-------- ==================================MADS_MADS  --------->ATHB12 --------->ANAC58             ---------   ttaaagttttgaattttatctcttgatttaggaagaaaagactaatcttcatttgttattataccaagacaattccaaatttgatttgaaactagatcat  17339300  Previous    Next  AGI:  At5g43130.1    Description:  TAF4 (TBP-ASSOCIATED FACTOR 4); transcription initiation factor. similar to TAF4b (TBP-ASSOCIATED FACTOR 4b), transcription initiation factor [Arabidopsis thaliana] (TAIR:AT1G27720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61456.1); contains InterPro domain Transcription initiation factor TFIID component TAF4; (InterPro:IPR007900) Range:  from: 17332677    to: 17338391    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g43140.1    Description:  peroxisomal membrane 22 kDa family protein. similar to peroxisomal membrane protein 22 kDa, putative [Arabidopsis thaliana] (TAIR:AT4G33905.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61458.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) Range:  from: 17338773    to: 17340636    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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