Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------MYB52(1)                                    <---------ANAC58                         <---------TOE2(3)                             <---------ANAC55(1)                             <---------TOE1(3)                       <---------YAB1        ----------->GT1            --------->ATHB51                       <---------MYB52(1)    <---------ICU4             <---------ICU4          <---------YAB1<---------ICU4       --------->YAB1             <--------HAHB4       <---------AHL20(2)  <-----------GT1  <---------ATHB12           <---------YAB1         <------   <---------YAB1     --------->TOE2(3)   --------->WOX13(1)    <---------ANAC46<----------DOF2 ------YAB1       --------->YAB1    <---------ANAC46   <---------ICU4  --------->ICU4  <---------TOE1(3) ---MYB52(1)     <------ZmHOX2a(2)  <---------ANAC58  --------->ICU4 --------->YAB1    <---------TOE2(3)   ttgttatatttgattatcgatcatcgttattacgagttgcttgtcaatcgttactacttattagttctgtgtcataattaagctttattagggtttttat  17326700                                                                                                    <                                                                                                    <                                                                                       <------MYB46(1)                                                                                       <------MYB83 <                                                  ------->MYC3                         <---------ANAC46                                                  <-------MYC3                         ----------->GT1                                                  ------->MYC2                        --------->MYB111(1)                                                  <-------MYC2                        <---------AtMYB61    --------->YAB1                               --------->ANAC58                     --------->MYB46(2)   <---------KAN4(1)                             --------->ANAC58                     --------->MYB59   --------->KAN4(1)                            <-------TEIL                      <------MYB46(1)  <-  <---------KAN4(2)                        ---------->DOF2                 <------------CBF        <- --------->YAB1                           ---------->DOF2            <-------TEIL <------MYB83    <-- ---AHL20(2)      ----------->HVH21   <-----------GT1         --------->ATHB12--------->ATHB12  -----   ttagaataatcgttcacaaactgacatagttcatattgttttactaaaggcacgttttatagatttattgattcatgtattgtttggtttggtataaatc  17326800                                                                          --------->YAB1     <-----------GT1            <------------MYB.PH3(1)       <------------CBF <<<<<<<<<<MYB80              --------->MYB52(1)              <---------GLK1(2) ---------MYB46(3)         <---------ANAC58            <---------ICU4    <---------YAB1 ------MYB83               <---------ANAC58            --------->YAB1  --------->YAB1             <-- ------MYB46(1)          <---------YAB1             --------->YAB1     <---------ICU4            <--- --------TOE2(2)       <---------At4g35610         <-------TEIL ----------->GT1                 ----- --------TOE1(2)      <---------YAB1           <---------MYB52(1)     <---------YAB1           <----- -------MYB52(1)   --------->GLK1(2)           --------->ARR14(2)     <---------AHL20(2)  --------->REM1(1) ---->ATHB12      <---------GLK1(2)        <-----------GT1  <---------YAB1--------->AHL20(2)   ------   gttggtttaacctagtttgagattctgatgcttaacggtttttttttccgatattcatcatcaagattgtttataattatacataaatgccttcaccatg  17326900                                          <---------At5g28300 <---------ICU4        <-----------GT1      ----------->GT1                  --------->CCA1(2)      --------->ATHB12<---------YAB1 -------WOX13(1)                      <---------ARR14(2)     <---------YAB1   ----------->TBP ---------CBF         --------->ANAC46--------->ARR14(2)   <---------ICU4   --------->YAB1 --------->AHL20(2) ---->ATHB12         <---------At5g28300<-------TEIL       --------->YAB1--------->YAB1    ---------- ----YAB1 ------------>CBF     <------------CBF        <-----------GT1<----------DOF2------------>CBF --->ICU4<-----------GT1     <---------AHL20(2)--------->YAB1--------->ICU4<---------YAB1  <---------AHL20(2)   attggagcatgttacaatacattcactgcataatattgaagattcacagttatagttttactcatgattactctttcattataaatatacaatataaatc  17327000                                                                                             --------                                                                                    <-----------HVH21                                                ------>ZmHOX2a(1)                <---------ANAC58           --------->ARR11(3)                  <---------ALFIN1                  <---------ANAC46           <---------ARR11(3)              <---------At4g35610                   <---------ANAC58          --------->RVE1(1)                --------->At4g35610                 <-----------GT1       <---------AHL20(2)                  <---------ZAT2                    --------->HSFC1(2)   <---------AHL20(1)              --------->ARR11(3)                        --------->HSFB2a(1)   <---------AHL20(2)              <---------ARR11(3)                        <---------HSFC1(2)   --------->AHL20(2)              <---------GLK1(2)                         <---------HSFB2a(1)  <--   --------->AHL20(1) <----------DOF2  <-----------GT1                   --------->ANAC58  <---------MYB52(2) ->TBP --------->AHL20(2)    <------------------------ANAC81             --------->ANAC58--------->ZAT6   tctaattaattaatatctctctctctttttctgtttagatttttcagctcctccttgattttcaaaaccatggacaagaattttcgtgtcaacactaacg  17327100                                                   <---------DEAR3(1)                                                   --------->DEAR3(1)                                    <---------ARR14(2)                                    --------->ARR14(2) <-----------TGA1                                --------->YAB1    --------->ATERF1(1)                          <------NtERF2           <------NtERF2--------->ANAC46                         <---------MYB46(3)     --------->bZIP60(1)         <---------ARR11(3)        --------->ARR11(3)--------->At5g28300   <---------ANAC46       --------->MYB46(3)  --------->ANAC58      <---------ANAC46        <---------ANAC58      --------->ANAC58  ----------->GT1      <---------ABI4(1)        <---------bZIP60(1)   --------->ANAC58  --------->ANAC46   --------->ANAC46--------->At4g35610   <---------At4g35610  --------->ANAC58   <---------DEAR3(1)----------->HVH21   --------->At4g35610               -------- ------->TEIL       <---------LBD16 --------->GLK1(2)  <-----------HVH21    --------->ARR11(3)------- ->MYB52(1)   <--------P<---------DEAR3(1)      <---------ANAC58    --------->MYB46(3)      --------- -------MYB52(2)  --------->ETT(2) <---------GLK1(2) <------NtERF2--------->RAP2.6(2) <---------MYB52(1)   acgaacgtaacatctggttgtccacggcggtgaatgagaatctgacaatggcgtcgtcgtcatctcagccacaaccaatatcgtctccgtttcatcaacc  17327200                        --------->HSFB2a(2)                           <---------ZAT18                        <---------HSFB2a(2)                    <----------DOF2                        --------->LBD16                   --------->HSFC1(2)               ----------->GT1                            <---------HSFC1(2)             ------->GAMYB                                <---------HSFB2a(1)           --------->At4g35610          --------->ATHB12  --------->HSFB2a(1)         <---------WRKY38(1)         --------->YAB1      --------->ARR14(2)         <---------WRKY12           <---------YAB1       --------->ARR11(3)                      <---        --------->WRKY18(1)       <--------HAHB4         --------->GLK1(2)                       <---      --------->At4g35610         <---------ICU4         <-----------ARR10                      <----  --------->GLK1(2)     ------>ZmHOX2a(1)                <---------ARR14(2)       <-----------GT1<--- ->WOX13(1)<---------At4g35610   <---------YAB1 --------->GLK1(1) <---------AtMYB61            <----- ->P --------->MYB59   <---------LBD16 <---------YAB1   <---------GLK1(2) <----------DOF2    -------- >MYB46(3)----------->RAV1(1)    --------->ICU4 <---------GLK1(1) <-----------RAV1(1)        <-------   agagaatcaggtcaacagagttaatcctggaagtcattattatgatttggaaaccctagaatcttcttttggtgggctttctttcaacgattcaagtgtt  17327300                                                                      <---------ANAC58                                                                      <---------ANAC58                                     ------>MYB46(1)                 <---------At4g35610        <---------YAB1               ------>MYB83                   --------->ALFIN1      ----------->GT1             --------->MYB46(3)              <---------MYB46(3) ---MYB46(1)           ------>MYB83 --------->WOX13(1)           --------->ALFIN1 ---MYB83              ------>MYB46(1)<---------ATHB12           <---------AtMYB61 -----AtMYB61        --------->DEAR3(1)  <---------ANAC55(2)     <---------DEAR3(1) ------MYB46(3)     <---------At4g35610  --------->ANAC55(2)     <-----------RAV1(1)             ---- ---P --------->YAB1--------->At4g35610 --------->MYB59       <-----------RAV1(1)                ---- ->ALFIN1<---------MYB46(3) <-----------HVH21              <---------AGP1                     <------ ----RAV1(1)      <-----------GT1<-----------------AGL1    <---------ARR14(2) <<<<<<<<<<<<<<<<<LFY  -   ggtcagaatggtgattcgattcacctccctcgtcgaaccaatcaggtattcactggcagtagttctggtggtgctggtgatgacaatggctacttgttac  17327400                                <------ZmHOX2a(1)                      <---------MYB52(1)                                     --------->YAB1                     --------->LBD16                                    <---------ANAC58  <---------MYB52(1) --------->At5g28300       <---------ICU4           <---------ANAC58            < ----->TOE2(2)   --------->AtMYB61             <--------HAHB4--------->At4g35610                   -- ----->TOE1(2)   --------->DEAR3(1)           --------->ICU4 <---------At4g35610                   -- -----GT1       --------->MYB46(3)     ---------->DOF2      --------->MYB52(1)                  ----- ---------->HVH21<---------ALFIN1--------->ALFIN1   --------->At4g35610 <---------ANAC46<---------YAB1   ctccgatgggttctcatcaccaccgtgaattagaggagttgcaaaggcataattatctgaatcaactgagaatgtcgtatcagaacgattatgctcatca  17327500                                                   <---------ANAC58                                                   <---------ANAC58                                           --------->YAB1                                         <--          --------->YAB1                   -------->HAHB4                                         --- ---------YAB1                             <---------ICU4                                  <---------At4g35610 ------->TOE2(3)                          <---------ATHB51--------->YAB1          <---------ANAC58--- ------->YAB1                             --------->ICU4<---------WOX13(1)        <---------ANAC58<-- ---->WOX13(1)                      ----------->GT1<---------ANAC46   <<<<<<<<<TBF1        --------->At4g35610   atcttattggtataatactgatggtgatggtaatgggatgcttaataatggtttcttgaatgatgttccttcttcttcaagagaccgtgtctcagattac  17327600  Previous    Next  AGI:  At5g43110.1    Description:  APUM14 (ARABIDOPSIS PUMILIO 14); RNA binding. similar to APUM13 (ARABIDOPSIS PUMILIO 13), RNA binding [Arabidopsis thaliana] (TAIR:AT5G43090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61441.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Pumilio RNA-binding region; (InterPro:IPR001313); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 17327070    to: 17329165    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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