Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <-------GAMYB   --------->At5g28300  <---------MYB46(3) <---------ANAC46 -------->RAP2.6(3) ------->MYB52(1)                                                                                   - -------->TGA1                                                                                    --- -------->HVH21                                 ----------->GT1                                   --- -----ICU4                                      <------MYB46(1)                                   --- ---->YAB1              <--------P              <------MYB83      <-------TEIL                 <----- --->ICU4              --------->At5g28300------->MYC3 --------->ANAC58                        ------ -->ARR11(3)        <---------LBD16       <-------MYC3 --------->ANAC58   ---------->DOF2     -------   atgacggttaacacatatgactcgcggtaagtagacacagtccatgtggatggtgaaacgacatgggatacatagacaaagacatgaattagcatcgttc  17277500     --------->ANAC55(2)     --------->ANAC58     --------->ANAC55(1)     --------->ANAC46     --------->ANAC58   <---------ALFIN1  <---------REM1(2)                                                                 --------->DAG2 <---------ALFIN1                                                          --------->WRKY18(1) -------->ZAT14                                    <---------MYB46(3)     <-----------HVH21 ------>ANAC58                                    --------->ALFIN1      --------->LBD16 ------>ANAC46                                  --------->ALFIN1       <---------ANAC58 ------>ANAC58          ---------->DOF2         <---------ANAC46       <---------ANAC58 ----ZAT18        ---------->DOF2     ---------->DOF2                 <---------LBD16            <--- --->ZAT14    --------->ANAC58      <---------TOE2(3)             <----------DOF2  ---------->DOF2 -->DOF5.7(2) --------->ANAC58  <----------DOF2<------ZmHOX2a(1) <---------DAG2 --------->YAB1------>ZmHOX2a(1)   actccacacgcatcacaaggaaaagagaaagaccctttaagaaagatgaggagtggatgctcgtgtgccttttccgggtcaagaataaagggcttcctca  17277600                                                                                                    <                                                                                                    <                                                                                                <----                                    --------->YAB1                                           <-------                                    <--------ATHB1                                           --------                                   <---------ATHB51                                          --------                                 --------->YAB1                                         --------->TOE2(3)                           <---------------AtSPL8                                  <---------AHL20(2)                         ---------->DOF2     --------->ARR11(3)          <-------TEIL   <-----------HVH21                    <-----------------AGL1   <---------ARR11(3)       ----------->GT1  --------->YAB1 ------ALFIN1       ----------------->AGL1  <---------CCA1(2) ----------->HVH21    <---------YAB1<---   cacattgtttacaaacagggagaccagaaaaggaacaataatacatatatctgtgaaatacccagtgacatatggtacatttgatataatcgtcaaatct  17277700       <------ZmHOX2a(1)     <---------TOE2(3)     <---------TOE1(3)  <---------MYB52(1) --------->LBD16 <-------GAMYB      <---------ANAC58                                                                - ---------MYB46(3)  <---------ANAC58   <---------ICU4                          --------->ICU4       - ---------DEAR3(2) <---------LBD16     --------->ATHB12                        <---------ARR14(2)   < -------RAV1(1)   --------->ALFIN1    <---------YAB1                           --------->ARR14(2)   < --ARR14(2)    <---------ARR14(2)  <---------MYB46(3)                ------>ZmHOX2a(2)   <---------ANAC58 ->GLK1(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)        -------->P      <---------ARR11(3)    <---------ANAC58 ->ARR14(2)    --------->ARR14(2) <---------------------WRI1 ------->TEIL  ----------------->AGL2   - --------HVH21<------ZmHOX2a(1)   <--------P   --------->ANAC46    --------->ARR11(3)    <---------ANAC46   gtcggttaaggatagaggatgtgcgggactggaagggttgatgatttcaaggcaacccttatggacgttgatctcatggcaaatatggcaagcgtgtttt  17277800                          --------->ANAC58                          --------->ANAC58                          --------->ANAC46                   <------MYB83                        --------->MYB52(1)       ----------->GT1                       ------->GAMYB             <------MYB46(1)                       <---------SPL7            <---------ANAC58                      --------->ANAC58           <------MYB83<------MYB46(1)                      <---------MYB52(2)         <---------ANAC58                      --------->ANAC58           <---------ANAC46                    --------->MYB52(1)          --------->MYB59                  --------->MYB46(3)            <---------MYB46(3)                  <---------MYB55(2)           <---------ANAC46                 --------->ANAC58             <---------MYB52(1)                 --------->ANAC58            <-------GAMYB   <---------MYB46(3)             <---------ALFIN1               <---------MYB46(3)             --------->AtMYB61              --------->MYB52(2)            --------->ANAC46                --------->MYB55(2)          <-----------GT1<---------LBD16    <-----------RAV1(1) -------->ZAT2   --------->ANAC46           <---------DEAR3(2)<-------GAMYB                  -------- ---------->RAV1(2) ------>MYB83      <---------ARR14(2)    <---------AtMYB61           --------->AtMYB61 ---------ZAT2 <---------ALFIN1--------->ATERF1(1)        <------ZmHOX2a(1)            --------->MYB46(3) ---------At4g35610 ------>MYB46(1)   --------->ARR14(2)<---------TOE2(3)        --------->GLK1(1) -------->At4g35610--------->MYB55(1) ------->TEIL    ---------->DOF2            <---------GLK1(1)   ccagctgtctcttcaccacacccaacgcacggagtcgacgaatcgtctgttgggtataaaggatggttgtgaaacggagatagaattccaccatcagcaa  17277900                     ==================================HOX2a_HOX2a                     ------>ZmHOX2a(2)                     ============================HOX2a_HOX2a                    --------->CCA1(2)                    <------ZmHOX2a(2)                    =============================HOX2a_HOX2a                    ===================================HOX2a_HOX2a                   --------->ARR14(2)                   --------->AGP1                         --------->ATHB12                   <---------AGP1                        --------->ICU4                   --------->ARR11(3)               --------->ANAC55(2)                   <---------ARR14(2)               <---------ANAC55(2)                   <---------ARR11(3)             --------->CCA1(2)          <---------AHL20(2)                     <---------ARR14(2)                 ---------->DOF2          --------->AHL20(2)                     --------->ARR14(2)          ---------->DOF2         <---------MYB52(1)       <---------ANAC46--------->GLK1(1)       --------->YAB1           --     =======================HOX2a_HOX2a         <------ZmHOX2a(1)        <---------YAB1           ---     ======================HOX2a_HOX2a    <------ZmHOX2a(1)           --------->MYB46(3)        <----     ------>ZmHOX2a(1)        <----------DOF2 <---------TOE2(3)    --------->MYB46(3)        <------- ->At4g35610      <---------CCA1(2)   --------->ALFIN1 <------------CBF--------->YAB1       <--------   tctcttcctccattaattgtagatctgaaaaactttgggggtgaggatgaggatatgtattgatttgccacaaccattataaagaataaaggccagtcat  17278000                              <---------AHL20(2)                             <---------AHL20(2)                             --------->AHL20(2)                             --------->AHL20(1)                         <---------AHL20(2)                                             --------->MYB46(3)                        --------->AHL20(2)                              <---------AHL20(2) --------->GT1          <---------AHL20(2)                             --------->ARR11(3)           < ------>ALFIN1      <---------AHL20(2)                                 <---------ARR11(3)    -------- -----O2            --------->AHL20(2)                    ------->GAMYB<---------AHL20(1)    <------- --ATHB12      <-------TEIL  <---------AHL20(1)        --------->MYB52(1)        <---------YAB1     < ---HVH21      ------------>CBF                 --------->TOE2(3) <---------ANAC46    <-----------GT1   gtggtgattcagtcacgttcaattttttaaatttattcatatactatatttcttaattaacggaagttttgtatatatttgttatatttaacgactatac  17278100             ----------->GT1             --------->YAB1                                --------->TOE2(3)      <-----------HVH21                                   --------->At4g35610     --------->bZIP60(1)                                  <---------ANAC55(2)     <---------bZIP60(1)              >>>>>>>>>>GT-3b <-----------HVH21                      <------- ---------ANAC58                   ----------->GT1   --------->bZIP60(1)                    --------- ->ZAT14    <---------YAB1  ---------->DOF2     <---------ANAC58            ------->GAMYB   <-------- --ZAT14  <---------At4g35610    ---------->DOF2<---------ANAC58      <-----------HVH21    <---------AHL20(2) ---------ANAC58     ------------------------>ANAC81 <---------bZIP60(1)<---------WRKY12--------->AHL20(1)   tatcgtgctgtcatatgataaaaaaaaaaaaaaagaaaagaaaaatactatcgtgctgtcacctaaatcaaatgtcaacgaaaatttaagtatattaatt  17278200                                                                 <---------MYB46(3)                                                             <------MYB46(1)            xxxxxxxxxxxxx                                                             <------MYB83               --------->ICU4                             <---------YAB1                <--------P              --------->ANAC55(2)                      ---------->DOF2                     <-------GAMYB            --------->ANAC46                    ----------->HVH21                <---------ARR14(2)            --------->YAB1 --AHL20(2) ----------->TBP----------->GT1           <---------ZAT14        ----------->GT1 >AHL20(2)  --------->AHL20(2)   <---------ICU4      --------->ARR14(2)    --------->DAG2 -AHL20(2)  <---------AHL20(2)  --------->ICU4    <---------ANAC46        ---------->DOF2  <---------YAB1   ttaaacagtagtatataaatgggtgaaagttgtaattatgtccctaaacattgagtatagggttggattgttgacataaagttatacataattttgataa  17278300                                               --------->ANAC46                                            <-----------GT1                                           <-----------GT1                                          <---------AHL20(2)     --------->KAN4(1)                                         --------->AHL20(2)     <---------KAN4(2)                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 --------                                     <---------YAB1       --------->AtLEC2                --------->ANAC46                     <xxxxxxxxxxxxxxxxsmallRNA(i)    <----------DOF2                  --------->YAB1                    ---------->DOF2--------->YAB1 <---------ALFIN1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            <---------AHL20(2)    <---------YAB1------>ZmHOX2a(1)<---------KAN4(1)    --------->AHL20(2) xxxxxxxxxx>smallRNA(si3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->YAB1      <---------AHL20(2)   atagtttgtgcgatttttttttcaaagttgctaattcttataattttatcctccactttcatgcagaataatcttacaaaatgaacaattatatgcaaca  17278400  Previous    Next  AGI:  At5g43030.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43040.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 17276219    to: 17277913    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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