Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 ---------->DOF2                                                           --------->LBD16                                                          ----------->GT1              --------->ATHB12                                                         <---------LBD16               <---------ICU4                                                        --------->MYB52(1)            --------->ICU4                                                        ------->TEIL                --------->YAB1                               --------->DAG2          --------->MYB52(1)           <---------ICU4                              ---------->DOF2        <---------MYB52(2)            --------->ICU4                --------->ARR11(3)                <---------ARR14(2)            <------ZmHOX2a(1)                <---------ARR11(3)                --------->ARR14(2)        ------>ZmHOX2a(2)<-------       --------->GLK1(1) ----------->GT1         ==================================HOX2a_HOX2a    <--   <------ZmHOX2a(1)     --------->LBD16         <------ZmHOX2a(1)      <---------YAB1<---------YAB1   ttgaaggagaaatcgagagttcttaaccggtgaaaagcgagaaccgagagaggaaacgaaccggaaaaagagttgtgatcgaggaataatgatttgagat  17274600            <---------GLK1(1)       ----------->GT1             <------ZmHOX2a(1)       --------->LBD16      --------->LBD16     <---------LBD16      <-----------------AGL1                                                    -   ------>MYB46(1)      <---------SPL7                                                              <   ------>MYB83         <-----------HVH21                                                         ---   --------->MYB52(1)  ------->GAMYB                                                      =========== <---------MYB59    --------->MYB52(1)                                                    <------ZmHOX2a(1) --------->AtMYB61  <---------DOF5.7(2)                        <---------ZAT2             =========== --TOE2(3)  --------->GLK1(1)    <---------TOE2(3)             --------->ZAT2  <-----------GT1   ---- ---------GT1--------->GLK1(2)   <---------TOE1(3)             <---------At4g35610     <-----------RAV1(2)   taaccaaaccggagaaatctggtaacggtccggttaaggaagtgttcttgagactcagaactcgaagctggtcgagtttattaactgagtcaggaatgag  17274700                                                                 ------>NtERF2                                                                 ----------->RAV1(1)                                                                --------->ANAC46                                                                <---------ALFIN1                                                             --------->ANAC46                                                             --------->ANAC58                                                             --------->ANAC58               --------->ARR11(3)                           ------->GAMYB               <---------ARR11(3)                          <---------ALFIN1               --------->ARR14(2)                     --------->ANAC46               --------->ARR14(3)                     --------->ANAC58               --------->AGP1                         <---------ANAC55(2)               <---------ARR14(2)                     --------->bZIP60(2)               <---------ARR14(3)                     ----------->GT1           ---------->DOF2   ------>MYB83             --------->ANAC55(1) --------->DEAR3(1)          ------>MYB46(1)   --------->HSFB2a(2) -------->ATERF1(1)          --------->MYB52(1)<---------HSFB2a(2) ------NtERF2 --------->RVE1(1)<---------MYB52(2)     --------->ANAC58 ------>DEAR3(1) ------>ZmHOX2a(2)             <---------------AGL15 ======================HOX2a_HOX2a            <-----------------AGL1                          ------- =======================HOX2a_HOX2a      ----------------------->TaNAC69(2)                  <------- ----->ATERF1(1)<------ZmHOX2a(2)  --------->MYB46(3) --------->ANAC55(2)           <---------ZAT2   tcgccctccaagataaagatcttcaataaccaaacgaacaactctgtttccataacacgtaacaccccaccattgacaaaaatgagagctcgtgtttatc  17274800                                             ----------->HVH21              --------->MYB55(2)                                            <-----------TGA1                <---------MYB46(3)                                            <-----------HVH21              <---------AtMYB61                                           --------->ANAC46              <---------ANAC46                                        <---------ARR14(2)               <-----------RAV1(1)                           --------->ANAC55(2)                           <---------ANAC58                           --------->ANAC46--------->ANAC58              <---------ANAC58                           ----------->GT1 --------->bZIP60(2)   ------->MYC2                           --------->ANAC58--------->O2          <-------MYC2  --------->MYB111(2)---                           --------->ANAC55(1)                   <-------MYC3 <--------P          ---      ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         ------->MYC3<-------GAMYB >>>>>>>>>TBF1   --------->HSFB2a(2)     --------->ANAC58--------->ANAC58     --------->ANAC58        >>>>>>>>>TBF1   <---------HSFB2a(2)     <---------ANAC55(2)--------->MYB52(1)--------->ANAC46<------MYB46(1)   --- -->ARR11(3)  <----------DOF2           --------->ARR14(2)      --------->ANAC58<------MYB83  >>>>>>> --CCA1(2)  --------->At4g35610  ---------->DOF2  --------->At5g28300<----------DOF2<------ZmHOX2a(1)   ttgttccataaatcagctttggatttaaaacgtaacaaagcagaaacgtcacggtgagaatgaaacacgcgctttgtgtggttggaggaagaagaagaag  17274900          ---------->DOF2       ----------->GT1 ----------->RAV1(1)                            ----------->GT1 ------>ANAC58                                <--------P             <---------ANAC46 ------>ANAC58                         <---------ARR14(2)            <---------ANAC58 ------>ANAC46  <------ZmHOX2a(1)      --------->ARR14(2)            <---------ANAC58   ---------->DOF2 >>TBF1--------->YAB1                --------->LBD16<-------TEIL--------->YAB1   ------->TEIL   aagcaacaatggtaaagaggaaacagaagagaagaaacccagaaatgggtaagttacatcgaagaagcatagcttgtaagacgaatgtgttaaagaagca  17275000                                                                ---------->DOF2                                                           ----------->HVH21                                                         ==================bZIP_DOF                <-                       --------->ANAC55(2)               <---------ANAC55(2)                     ----                       <---------ANAC55(2)               <---------ANAC58                        <---                     <-----------GT1                     --------->ANAC55(2)                    -----                  <---------ICU4                         --------->TGA1a                       <-----                  --------->YAB1                         <---------ANAC58                     <------                 <---------YAB1                         <-------TEIL                        <--------                 --------->ICU4                       <---------SPL7          ------------>CBF-------               <---------ICU4                      <------ZmHOX2a(1)      --------->ANAC58  ---------              <---------YAB1                    <-----------RAV1(2) <------ZmHOX2a(1)   <---------REM1(1)              --------->ICU4         ----------->GT1<---------------AtSPL3--------->ANAC58  ---------   tgtaaatgtctgtctgattattattacatatcaagagagaggtgaagagagcaggaggtacgtgacaaaaggatgtaagaaacaatagagaagtagctgt  17275100                          --------->REM1(2)                        <-------MYC3                        ------->MYC3       ==========================bZIP_DOF ------>NtERF2         ========================bZIP_DOF      <---------AHL20(2) -----NtERF2           --------->O2                        <---------YAB1 ----->ETT(1)          <---------O2  --------->DAG2       --------->AHL20(1) ------ANAC46          ========================bZIP_DOF  <---------ICU4 ---->ALFIN1           <---------TGA1a                   <---------AHL20(2) ------HVH21           --------->TGA1a----------->GT1    --------->ATHB51     --------->ANAC55(2) -----RAV1(1)          <---------ANAC46                  --------->AHL20(2) <---------YAB1 -At4g35610            --------->ANAC55(2)              <---------YAB1    --------->YAB1 ---->HVH21          ------------->DYT1  ---------->DOF2--------->ICU4   <---------YAB1 >At4g35610        <-----------HVH21---------->DOF2<---------ANAC46    --------->YAB1 >ZAT2 ---------->DOF2 <---------ANAC55(2)         ----------->GT1    --------->ICU4   cggggactggaaagttttcagagtcacgtgaagactgataaagtaaagaagttgtgtaattattttagtgtatttatgatacttgttgaactgttgaacg  17275200                                                          ------>ZmHOX2a(2)                                                          <---------MYB59                                                         <------ZmHOX2a(2)                                                         --------->CCA1(2)                                                        >>>>>>>>>GATA-3                                                        --------->AGP1                     ------>ZmHOX2a(2)                                                        >>>>>>>>>GATA-2                    <---------MYB59                             <---------AHL20(1)         >>>>>>>>>GATA-4                   <------ZmHOX2a(2)                             --------->AHL20(2)         >>>>>>>>>GATA-1                  <-----------ARR10                             --------->AHL20(1)         <---------ARR11(3)               <---------AGP1                             --------->ARR11(3)         --------->ARR11(3)               --------->ARR14(2)                             <---------ARR11(3)        --------->GLK1(1)                 <---------ARR14(2)                             <---------AHL20(2)   <------ZmHOX2a(1)                 --------->MYB52(1)                            --------->AHL20(2)    ===============HOX2a_HOX2a       <---------ARR14(2)      <------ZmHOX2a(1)<-------TEIL               ==============HOX2a_HOX2a        --------->ARR14(2)      ==================HOX2a_HOX2a      --------->ARR14(2)                     --------->YAB1 ------  ---------->DOF2<------ZmHOX2a(2)       <---------ARR14(2)              <----------DOF2 ------->TEIL   aagtaaaaggatagtatggatcagattcaaatatattaacgccgattttgtaggaagagatctaactcttgttttctttctatcagaaacggatctaact  17275300                                             ================HOX2a_HOX2a                                             ------>ZmHOX2a(2)                             <---------TOE2(3)                             --------->MYB59--------->CCA1(2)       ----------->HVH21                        --------->ATHB12    =================HOX2a_HOX2a                     --------->YAB1         <------ZmHOX2a(2)      <---------WOX13(1)             ---                 <---------YAB1            <-----------ARR10      <-------GAMYB        --------->MYB52(2)                 <---------AHL20(2)        --------->ARR11(3)    --------->MYB55(2)    --------->MYB46(2)              <---------AHL20(1)           <---------ARR11(3)    <---------MYB46(3)    --------->MYB59           --------->AHL20(2)<---------TOE1(3)      <---------TOE2(3)               <---------STY1(2)       ----------->GT1 <---------YAB1      --------->AGP1       <---------AtMYB61   ------------>MYB.PH3(2)    --------->ICU4  <---------YAB1         <---------AGP1    <-----------RAV1(1)------------>MYB.PH3(2) --->MYB46(3) --------->AHL20(1)     --------->CCA1(2)<------ZmHOX2a(1)      ---------->DOF2      <--   actgtaatgaagaaaaaatattattatgatttaggttagatataagatctaattaaggaccatatggtggttgacacttaaaagctagttagttaacaat  17275400                                              <---------HSFB2a(2)          <---------YAB1                      --------->HSFB2a(2)      <---------GLK1(2)                <-----------------AG    --------->ICU4                 --------->TOE2(3)     ---------->ID1                           <-- -------->HVH21 =========================================MADS_MADS <---------ANAC58           <------ --------ID1    --------------->AGL15  <-----------------AGL1      <---------ANAC58         ------->TEIL   gtgacaaagattatttttcaactaatagcattttgtttcttaattgttttggaaagtttgtttttttttgcttccagttgaagtttcaactatgaacttt  17275500  Previous    Next  AGI:  At5g43020.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G67200.1); similar to putative receptor kinase [Malus x domestica] (GB:ABA82080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61022.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 17272519    to: 17274970    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version