Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->AHL20(2)                                                                              <---------AHL20(2)                                                                             --------->YAB1                                                                          --------->YAB1                                                                          <---------AHL20(1)                                                                          <---------ICU4   --------->AHL20(2)                                                     <---------AHL20(2) ----YAB1--------->ANAC46                                                 --------->AHL20(2) --AHL20(2)                                     <---------YAB1           --------->ICU4 ->AHL20(2)                                   <---------AHL20(2)       --------->YAB1 >AHL20(1)                           <---------ANAC55(2)   <---------DAG2<---------YAB1 -AHL20(1)                           --------->ANAC55(2)   <----------DOF2<--------ATHB1         <--- >AHL20(2)                   ------->TEIL     --------->AHL20(2)       <---------ICU4          <----- -AHL20(2)    --------->YAB1<---------CCA1(2)<---------AHL20(2)     --------->YAB1            -------   tttaaaaatataagaaacataactcacattgtatctaaaacgtattatttatttttaaaaactttttttctaataataattttaatcgaaagactaataa  17251900                                                                                 <---------TOE1(3)                                                                             --------->YAB1                                                                           <---------ANAC55(2)                                                                           <---------TOE2(3)                                                                     --------->AHL20(1)  ----------->GT1                                                    <---------AHL20(1) ------TOE2(3)                         <---------GLK1(1)        --------->AHL20(2)                 -- ----AHL20(2)                        <------ZmHOX2a(1)          <---------AHL20(2)   <-------TEIL <-- -->AHL20(2)            <-----------GT1--------->GLK1(1)       --------->AHL20(2)<---------TOE2(3)---   atgttagtaaaaatgtattcgagatttaacttattgaaaggatttcaaagtttctctagactaaatttaaaaatattaagtataaggttcacaagagcaa  17252000            --------->AHL20(2)            <---------AHL20(1)            <---------AHL20(2)            --------->AHL20(1)         --------->AHL20(2)        <---------AHL20(2)       --------->AHL20(2)   <---------AHL20(1)   --------->AHL20(1)   <---------AHL20(2)   --------->AHL20(2)  <---------AHL20(2)  --------->AHL20(2)                                                                    <---------At4g35610 ------->AHL20(2)                                                                   ------->MYC3 -------AHL20(2) <---------AHL20(2)                                                 <-------MYC3  --- ------>AHL20(2)--------->AHL20(2)                 <-----------GT1  <---------AHL20(2)  --------->At4g35610   ataaataaatttaaaatattaaatatagttttgctataaatctgttgagaatataactatcaaataacatattatttgaacttgcacatgagctcaaact  17252100                                      <----------DOF2                                   --------->ARR11(3)                               <------ZmHOX2a(2)   <------ZmHOX2a(2)                <---------ATHB12   <---------ARR11(1)    <----------DOF2          <-----------GT1     <---------ARR11(3)  --------->ARR11(3)       <---------ARR11(3)     --------->ARR11(3)  <---------ARR11(3)       <------ZmHOX2a(1)       --------->ARR11(3)    XXXXXXXXXXXXXXXXXXXX>MIR1886.2             <---------ICU4    --------->DAG2       --------->AHL20(1)   <XXXXXXXXXXXXXXXXXXXXMIR1886.3      <---------ICU4           ---------->DOF2      --------->AHL20(2)    <---------YAB1    ---------->DOF2  <---------YAB1            ============ ------->DOF2   <------ZmHOX2a(2) <---------CCA1(2)===============================HOX2a_HOX2a   tatagcaaatatataccgatcaatagaattaagatcaaatctttgatgaaaagatcgaacttttgatgattccatcaggactccaattcgcaaaagtgct  17252200                                        ------->PIF4                                        <-------PIF4                                        <-------MYC3                                        <-------PIF5                                        ------->PIF5                                        ------->MYC4              ==========================MYC_MYB              ===================================MYC_MYB              -------->P                <-------MYC4        ------->PIF4                    ------->MYC2        <-------MYC3                    ------->MYC3        ------->MYC3                    <-------MYC2        <-------MYC4                   --------->TGA1a        ------->MYC4                   <---------O2   ------->MYC2        ------->PIF5                   <---------TGA1a<-------PIF5        <-------PIF5                   --------->O2   <-------MYC2        <-------MYC2                   ================MYC_MYB        ------->MYC2                   --------->ANAC55(2)        <-------PIF4                   <---------ANAC55(2)       <---------ANAC55(2)             =============================================MYC_MYB       ================MYC_MYB         --------->ANAC46       ================MYC_MYB        ------------>OsbHLH66       <---------TGA1a               <------------OsbHLH66       --------->TGA1a               <---------ALFIN1 ------->PIF4                 --------->YAB1       --------->O2             --------->ZAT14       <-------PIF4    <---------ANAC55(2)       <---------O2             <---------ZAT14       <-------MYC3    --------->ANAC55(2)       --------->ANAC46        <-----------HVH21      ------->MYC3    --------->ANAC58             <-       --------->ANAC55(2)    --------->TGA1a         --------->TOE1(2)  --------->MYB52(1)      ----      ------------>OsbHLH66   --------->bZIP60(2)     <-------MYC4    --------->ANAC46           <---     <---------ALFIN1         --------->O2            ------->PIF5    --------->ANAC58        <------     <------------OsbHLH66    =========================MYC_MYB        --------->ANAC55(1)    <------- ================bZIP_DOF   <---------ALFIN1  -------->P    --------->SPL7  ------->GAMYB    <-------   acttcgcacacgtgccaactcgcacaagtgccacttcacacacgtgccaactcgcacatgcgaacgaagaacacgcaacggagaataataaacaccgtca  17252300                              ------->TEIL                             --------->ARR14(2)                             ------>MYB46(1)                           <---------MYB46(2)                           <---------MYB52(2)                           --------->MYB46(3)      <-----------TGA1     --------->DEAR3(1)     --------->YAB1    ----------->HVH21   <-----------GT1  *TSS  --------->ANAC46 ---------DOF2     <---------At4g35610 ----->At4g35610   ------>NtERF2 ------At4g35610   --------->At4g35610 ---MYB52(1)      --------->DEAR3(1) ----HVH21      <---------RAP2.3(1)   <----------DOF2 ----TGA1    <-----------GT1 ------>MYB83                                                    --------   gcttttatcgtcatttttcgccgctctcaccgaacctctgctttctctctctctctctctctctctctctctctctctctctctctctctctctatctct  17252400                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                      --------->LBD16                                                                                      <---------ATERF1(1)                                                                                     <---------DEAR3(1)                                                                                     --------->ATERF1(2)                                                                                     <---------ATERF1(2)                                        --------->ANAC58                             --------->DEAR3(1)                                        --------->ANAC58                    <----------DOF2                                       <---------------------WRI1          <---------ANAC58                                    --------->ANAC58                       <---------ANAC58                                    --------->ANAC58                <---------ZAT18 <---------LBD16                                   <---------------AtSPL8           <-------TEIL  --------->ANAC46 --                                   <---------------AtSPL3           <---------ZAT14 --------->ATERF1(1)                             ---------->DOF2                        --------->ZAT14------->GAMYB <--- ->ZAT6                  <---------------AGL15               <---------ARR14(2)   --------->DEAR3(1)   actgtgcgaaaatggcgatgaaggcttctatcaaaggcaagtacgatactgacaaaaccagtggaatcggttcacttgctttcaacgccggcgatattaa  17252500            <---------WRKY18(1)             --------->WRKY38(1)           ----------->HVH21      <---------DEAR3(2)       ------>NtERF2             --------->DEAR3(1)      <---------ALFIN1          --------->ATERF1(1)      --------->RRTF1(3)        <------NtERF2      --------->RAP2.3(3)      ------>NtERF2----------->HVH21      --------->DEAR3(1)       <---------RAP2.3(1)     <------NtERF2            <---------DEAR3(1)    <---------ATERF1(1)       --------->DEAR3(1)    ------>NtERF2           <-----------HVH21<---------WRKY18(1)   --------->ANAC46        ==========================bZIP_DOF   --------->ANAC58        <---------O2     --------->WRKY45   --------->ANAC58        <---------TGA1a  --------->WRKY12 ------->CCA1(2)           --------->TGA1a<----------DOF2       --------->ZAT14 ------At4g35610           --------->O2------>ZmHOX2a(1)        <---------ZAT14   gctacgcgccaccatgaccgatgctactctcgtcgccggtcctactttgaccggtctcgctctcgctgtagagaagcctggttccttcatcgtcgagtac  17252600            <-----------HVH21          --------->DAG2        ---------->DOF2                                                                         <----    <---------------AGL15                --------->ANAC58                                   <--------    --------------->AGL15              ---------->DOF2                                      <--------   ----------------->AGL2             <---------WRKY38(1)                                <---------WOX13(1)   ----------------->AGL1             <---------WRKY45                                  <---------ANAC58   <-----------------AGL1    --------->ATHB12       --------->TOE2(3)                   <---------ANAC58   ----------------->AGL3   <---------YAB1        <---------ARR11(3)                   --------->ATHB12   ----------------->AG  <----------DOF2 --------->ANAC58      <-----------GT1       <---------WOX13(1)   aacgtccctaaaaaggtcagaacaactcttttgatttgagtcaaagcaaacaaatcttagaaatttttcaattcccatggaaatgagattgattgcttac  17252700                                                     <---------ANAC58                                                     <---------ANAC58                                              <---------At4g35610                                              --------->At4g35610                        <---------TOE1(3)                     --------->ANAC58         <---------ZAT2                   <---------LBD16       <---------TOE2(2)                  --------->ANAC46                   --------->GLK1(2)       <---------TOE1(2)                  --------->ANAC58                  <---------ARR14(2)     --------->TOE2(2)                    --------->ANAC58                  <---------GLK1(2)     --------->TOE1(2)          --------->TOE1(2)  <---------YAB1           --------->ARR14(2) -----YAB1           --------->ANAC58     <---------ANAC55(2)              <------ZmHOX2a(1) -ANAC58           ---------->DOF2        --------->ANAC55(2)            <---------TOE2(3)         <- -ANAC58 <------ZmHOX2a(1) <---------MYB52(2)------->TEIL           <------ZmHOX2a(1)    <---------TOE2(3)   gattaaacctaggattcaagtcaaagcaaacaaacctagaaattacgcagctaatgcttgaattgaagtaggatttaggattctggagtttagggttttt  17252800  Previous    Next  AGI:  At5g42960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45170.1); similar to pore protein of 24 kD (OEP24) [Pisum sativum] (GB:CAA04468.1) Range:  from: 17252320    to: 17253907    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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