Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->At5g28300                       ---                                 <---------ALFIN1      ----------->GT1                     --------->ANAC58                               <---------ALFIN1   <------ZmHOX2a(1)                        --------->ANAC58                     ---------->DOF2          ---------->DOF2 <----------ID1     ----------->RAV1(1)   tagaaactctatccatatagacccaaagaagggccactcttctattctcaaaggactcggtaaaaaaacaaatgcgaacgagacaacaaaaacaagtaag  17241300                                    <-------PIF5                                    ------->MYC2                                    ------->PIF5                                    <-------MYC3                                    ------->MYC3                                    <-------MYC2                                   --------->O2                                   <---------O2                                         <---------ANAC58                                   --------->ANAC46                                     <---------ANAC58                                   --------->TGA1a                                     <-------TEIL                                   <---------TGA1a                                   ------->MYC3                                   ===========================bZIP_DOF               <-------PIF4                                   --------->bZIP60(2)        ----------->GT1        ------->PIF4                                 <------------OsbHLH66    ===============================bZIP_DOF                                 <---------ALFIN1         --------->TGA1a            <-------PIF5                              --------->ANAC46            --------->O2               ------->MYC2                           --------->ARR14(2)             <---------O2               <-------MYC2        --------->ANAC46   <---------ARR14(2)             <---------TGA1a            ------->PIF5      --------->ANAC46 --------->LBD16             =================bZIP_DOF         <-------MYC3     <---------REM1(2)<---------ANAC58             ---------->DOF2                  <---------ANAC58 --------->ANAC46     <---------ANAC46        <---------GLK1(1)               ---------->DOF2      -- ------>ZAT14         <---------ANAC58        --------->GLK1(1)    <-----------GT1  <---------ANAC58   aacactctacgcgctccctccaatgcgcgtaaaccccacgtgagactgatatccaaagacaagtgagttaaacgctctgtttaagcgcgtgcgttcagac  17241400                                                                   <---------AHL20(2)                                                                  <---------AHL20(2)           <---------ICU4                                         --------->AHL20(2)           --------->ATHB12                                   <---------AHL20(2)           --------->YAB1                 ---------->DOF2    --------->AHL20(2)          --------->ICU4           ----------->GT1           <---------AHL20(1)      --------->CCA1(2)          <---------YAB1         ---------->DOF2             <---------AHL20(2) ---------->DOF2        --------->YAB1        --------->TOE1(3)      --------->GLK1(1)       --------->MYB46(3)    ----------->GT1           --------->TOE2(3)     --------->ARR11(3)     --------->MYB52(1)      -- -------->DOF2               --------->ZAT6         <---------ARR11(3)   <---------MYB52(2)    ------   acaaagtggataatcatggggaaactgtctaaccctaaagaaaaaaaagagaaagatttctaattttttttaatagctaaccaaaagagatggagaatgc  17241500                                    <---------ANAC46                                  ------>NtERF2                                 --------->ANAC46                           <-----------TGA1                                 --------->ANAC58                          --------->bZIP60(2)           --------->CCA1(2)     --------->ANAC58                          --------->ANAC46          --------->ARR14(2)    --------->SPL7                     ------>MYB46(1)    --------->ANAC58            ------>MYB46(1)                    <---------TOE1(2)    --------->ANAC46            ------>MYB83                       ------>MYB83     --------->ARR14(2)    --------->ANAC58          --------->TOE1(2)                  --------->TOE1(2)  <---------ARR14(2) --------->ARR14(2)     <---------ANAC58                     <-----------GT1<-----------HVH21 <---------ARR14(2)     <---------ANAC58                 <----------DOF2   --------->O2 --------->ARR10       --------->At4g35610           ------>ZmHOX2a(1)    ------>ZmHOX2a(1) ----->GT1<---------ARR11(3)  --------->TOE2(2)<---------MYB46(3)--------->TOE2(2)--------->At5g28300   taaaatacgctagatatgaaatagtagcttaacctacgccgtattttagtcgttcctctcttttaaacctacgttcctcgtcaccgtaatcgctctcgct  17241600                                                                                             --------                                                                                             <-------                                                                                         --------->DEAR3(1)                                                                                        --------->ATERF1(1)                                                                                        <------NtERF2                                                                                       --------->At4g35610                                                                                       ------>NtERF2                                                                                       <------NtERF2                                                                                       <---------At4g35610                                                                                       --------->LBD16                                                                                      ----------->RAV1(1)                                                                                      --------->DEAR3(1)                                                                                      --------->RAP2.3(2)                                                                                      --------->RRTF1(2)                                                                                     --------->RAP2.3(1)                                                                                     --------->RRTF1(1)                                                                                    ------>NtERF2                                                                                    <---------ATERF1(1)                                                                                    --------->LBD16                                                                                    --------->At4g35610                                                                                   <---------ALFIN1                                                                                   --------->ANAC46                                                                                   --------->DEAR3(1)                                                                                  --------->RAP2.3(1)                                                                                  --------->ATERF1(1)                                                                                 <---------ATERF1(1)                                                                                 <---------RAP2.3(1)                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                               --------->ATERF1(1)                                                                              ------>NtERF2 ---------                     <----------DOF2                                          <---------ATERF1(1)  --                 --------->REM1(1)                                          <---------MYB52(1)   ----               <----------DOF2                                             =======================RAV             <---------DEAR3(2)                                            --------->At4g35610  -----           ---------->ID1                                           --------->ZAT6<------NtERF2 -----          <-----------HVH21      <----------DOF2    <------ZmHOX2a(2)      <---------At4g35610  -----   <------------------------ANAC81           XXXXXXXXXXXXXXXXXXXXX>MIR402  ----------->RAV1(2)  -----   ctctctcttcttcgtcgcttcatctttctctctctctttgtaacttcgaaaccgatcaaatccatggctaactcttccgctggctccgccgcagaccacc  17241700                                --------->ARR14(2)                                <---------ARR14(2)                                <---------AGP1                                --------->AGP1                                --------->ARR14(3)                                <---------ARR14(3)                                <---------ARR11(3)                                <---------GLK1(2)                           ----------->RAV1(1)                         <---------ZAT18                         --------->ABI4(1)                        --------->AtMYB61        --------->AtMYB61--------->ZAT14     <---------ALFIN1   <---------ALFIN1  ------->GAMYB         --------->DEAR3(1)     --------->AHL20(2) <---------MYB52(2)    --------->ANAC46        <---------AHL20(2) --------->MYB46(3) --------->MYB46(3)     <---------CCA1(1)                                  >>>>>>> ->AtMYB61         <<<<<<<<<GATA-3         <---------RVE1(1)                                  >>>>>>> --ALFIN1          <<<<<<<<<GATA-2        <---------ARR11(3)                                  >>>>>>> >MYB46(3)         <<<<<<<<<GATA-1        --------->ARR11(3)                                  >>>>>>> --------->RAV1(1) <<<<<<<<<GATA-4------>ZmHOX2a(2)                                          <------ZmHOX2a(1) ----->LBD16     --------->WOX13(1)   ---------->DOF2                   ------>ZmHOX2a(1)   <-------- ---->ANAC46   <---------MYB52(1)<------ZmHOX2a(2)            <-----------GT1         --------->ATHB12 ---->DEAR3(1)--------->LBD16   --------->ARR11(3)        <----------DOF2            <---------ATHB12 ---->ANAC58  <-----------HVH21<---------CCA1(2)        <------------------------ANAC81    <---------TOE2(3) ---->ANAC58 --------->ANAC46  <---------ARR14(1)<-----------GT1  <<<<<<<<<TBF1   --------->LBD16   gcaacaaacacctctccgtcaatccaccgcaccagatcttcaaaggtattttaatcgcttcttttttcttcttcctcttctctcccgatgatttaggatt  17241800                                                                              <---------MYB46(3)                                                                            <---------MYB52(1)                                       ------>ZmHOX2a(1)                   --------->LBD16 >>ARR1                              --------->YAB1                       --------->LBD16 >>ARR2                             <<<<<<<<<ARR2                        <---------LBD16 >>ARR2                             <<<<<<<<<ARR1                <---------CCA1(2) >>ARR1                             <<<<<<<<<ARR1           <---------At4g35610 <----------DOF2 -YAB1                              <<<<<<<<<ARR2   <---------YAB1   <----------DOF2                <   gtgttttgagtctctctcattacagagactcgaacacaatcctaatttttcagtgtgattgtagctcatctctttcccggtgcttaatcggagattgaat  17241900                 <---------YAB1             <---------AHL20(2)             --------->AHL20(2)         <---------GLK1(2)  --------->DOF5.7(2)       --------------->AGL15      ------>ZmHOX2a(2) --------->TOE2(3)  <---------YAB1<---------TOE1(3)  --------->ARR11(3)                        <----- --------->TOE1(3)--------->YAB1  <---------TOE2(3)  <---------ARR11(3)           --------->At4g35610 ---------ZAT6   <---------AHL20(2)             <----------DOF2                   <---------At4g35610   tagcgttaacagaatttatattataagtctctaattagggtttttggtgtctttagatcgttttcgataacattaccagttttcagctcttggggttttg  17242000                                                                                                    <                                   ----------->GT1                                                  <                              <------MYB83                                                  ---------                     --------->AHL20(2)---------->DOF2                                     <-------GAMYB --------->MYB59  <---------YAB1   <---------ZAT6                                         --------->MYB52(2) <---------------AtSPL8       <------MYB46(1)        <---------AHL20(2)         <---------YAB1    <-- ----YAB1    ----------->GT1 --------->MYB59        <---------YAB1     <---------ANAC46   <---------MYB46(3)   attttggtactgaatttgttatttttaatatttggtattgttaaagcattgatttttaatggttccatgagctatgtgtgttatcaatttgtttgttgtt  17242100             <-------TEIL            <------ZmHOX2a(2)           --------->AGP1           --------->ARR14(2)           <---------ARR14(2)           --------->ARR11(3)         <----------DOF2  <---------------AtSPL3           <---------ARR11(3)      <---------ARR11(3)  <---------------AtSPL8   <---------MYB46(3)              --------->ARR11(3)  --------------->AtSPL8                    <--- -----------RAV1(1)             --------->AHL20(2)<---------ANAC46  <---------CCA1(2)    <---------At4g35610 ---------ZAT6                  <---------AHL20(2)--------->ANAC55(2)                 ---------->DOF2 ->ID1<---------REM1(1)     ----------->GT1       <---------ANAC55(2)       --------->REM1(2)<------- -------ANAC46  <---------MYB52(1)<---------CCA1(2)    --------------->AtSPL3       <---------MYB59   tagtgttgttgtagatccattagatgtgtattgtttaaatctttgatgtgagacgtattggtacttcattgtatcccttgtagagacctaaagctgattc  17242200  Previous    Next  AGI:  At5g42950.1    Description:  GYF domain-containing protein. similar to GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G27430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61171.1); contains InterPro domain GYF (InterPro:IPR003169) Range:  from: 17241664    to: 17248583    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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