Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                   ------>ZmHOX2a(1)                                           ------                                 ----------------->AGL3                                      <-------                               --------->GLK1(2)                                             ------->GAMYB                               <---------ARR14(2)                                           ---------                               --------->ARR14(2)                                          --------->ANAC58                        <---------At4g35610                                                -------->P                        --------->At4g35610                                                --------->ANAC58 ----------->GT1        --------->ZAT2                                                 --------->ANAC46 ----->ARR11(3)         <---------ZAT2     <---------ARR11(3)       <-----------GT1    --------->ANAC58 --->ICU4     <---------YAB1  <---------GLK1(2)         --------->YAB1                 --------->ANAC58 ->YAB1---------->DOF2--------->ANAC46     --------->ARR11(3)      <---------ICU4 ---------->DOF2 <--   attttgttacaaagttgtcattacacagctcagaatccttatgtagatatcaaatctataaacatctaattatctcttcaatcgcaaagaagcaaccaaa  17216600                                                                     --------->YAB1       --------->ANAC58                                 --------->DOF5.7(2)             <---------ICU4 >MYB46(1)                            <---------ZAT6  <---------ANAC46            --------->ANAC58 >MYB83--------->ANAC58               ----------->GT1 <---------ANAC58            --------->ANAC58 --MYB59                        --------->ATHB12      <---------ANAC58      --------->YAB1 >MYB46(3)                     <-------TEIL        <----------DOF2   <---------ICU4--------->ZAT18 -----TEIL               <---------AHL20(2)   <-----------GT1       --------->ICU4--------->ANAC46   ttcatcaacaagacaaatatcgaacaatttatgttcattagtgtaaataaactctttcgtttacttcacaataatcaacaataaacgcactaattccatc  17216700                                                                  ----------->GT1                                     <---------ZAT18           <---------ANAC46                                    <---------MYB52(2)       ------>NtERF2                                   <---------At4g35610   --------->GLK1(2)                                --------->At4g35610      <---------ARR14(2)                                <---------ZAT2           --------->ARR14(2)                           <------ZmHOX2a(2)         ----------------->AG                           --------->CCA1(2)         ----------------->AGL1                          --------->ARR11(3)         <-----------------AGL1                          <---------ARR11(3)       <---------ARR14(2)                          <-----------ARR10       <---------ARR14(2)                          <---------ARR14(2)     --------->HSFC1(2)              --------->LBD16   <---------At4g35610--------->GLK1(2)              --------->At5g28300  --------->At4g35610<---------YAB1                          -------             ----------->GT1------>ZmHOX2a(2)    --------->HSFB2a(1)                         <-------      ---------->DOF2     --------->ARR14(2)     <---------HSFB2a(1)                       --------->WOX13(1)    --------->DOF5.7(2)   --------->AGP1   --------->MYB52(1)--------->LBD16   --------->ANAC58   --------->TOE1(3)      <---------AGP1  --------->ANAC46  <---------LBD16    --------->ANAC58   --------->TOE2(3)     <---------CCA1(2)----------->HVH21<---------LBD16     --------->AtLEC2  ----  ----------->GT1 --------->ICU4--------->ZAT2   <----------TaMYB80<------ZmHOX2a(1)     <---------YAB1   aaaaacgttaaatcgccgtaaaaattcagatctgagcagcgaacacgacggagattccgattccggcgaggaaaaacagacatgcaaaaatatcaatgaa  17216800                                                               <---------HSFB2a(1)                                                               --------->HSFC1(2)                                                       --------->ANAC58                                                       --------->ANAC46                   --------->At4g35610                                                       --------->ANAC58                   <---------At4g35610                                                      <---------LBD16           <-----------HVH21                                                      --------->LBD16           <-----------TGA1 ---------->DOF2                                     <---------ALFIN1        --------->GLK1(2) -->YAB1                                            <---------REM1(2)      <---------HSFC1(2)       - --ATHB12                                         --------->ANAC46         <---------HSFB2a(1)     -- ------>DOF2          --------->AHL20(2)--------->ALFIN1       <---------HSFC1(2)       <---------WRKY38(1)   aaagaaagaaaacatggaatatgtataaataccatggaagaagtggtctctccctccacggaagaagcatcgtcggaagaatcgtcagagtcatcggaga  17216900                                 <---------ATHB12                                 --------->MYB46(3)                                ------>MYB83                                >>>>>>>>>>>>>>>>>LFY                                ------>MYB46(1)                                -------->P <---------ANAC58                               --------->MYB55(1)                              --------->DEAR3(1)                              <---------MYB111(1)                              --------->AtMYB61<---------YAB1          ---------->DOF2     <---------MYB55(2)   ------>NtERF2              <---------MYB46(2)   <---------ATERF1(1)        --------->MYB46(3)  <---------DEAR3(1)          <---------MYB111(2)<----------DOF2                 ----------->GT1 --------->RAP2.6(3)       <-----------GT1 <---------ANAC58               >>>>>>>>>TBF1 -------->MYB52(1)        --------->MYB46(3) <---------CCA1(2)         >>>>>>>>>TBF1    --------->RVE1(1) --------->HVH21   ------>ZmHOX2a(1) <-----------RAV1(1)          ------------------------>ANAC81 ---   aacgacggctactaaagcgtcctctgtaatcaccaaccattgttggcttatctttgtggagagagagagagaagaagaagaaaatgaaaaatatcagaga  17217000                                                                    --------->ANAC55(2)                                                                    --------->ANAC46                                                          ---------->DOF2                                                          ====================bZIP_DOF                                                       ----------------------->TaNAC69(2)                                                     --------->ALFIN1                                                    ------->MYC4    <---------ANAC55(2)                                                    <-------PIF5    <---------O2                                                    ------->PIF5    --------->O2                                                    ------->MYC2    =================================                                                    <-------MYC4    --------->ANAC58                                                    ------->MYC3    <---------bZIP60(1)                                                    <-------MYC3    --------->bZIP60(2)                                                   <---------TGA1a  --------->bZIP60(1)                                                   --------->ANAC46 <---------TGA1a                                                   ==================bZIP_DOF                                                   --------->TGA1a  --------->TGA1a                                                   --------->O2     --------->ANAC58                                                   <---------O2    <-----------bZIP910(1)                                            <----------DOF2--------->DAG2       ------------>CBF                                            =================bZIP_DOF --------->TGA2(2)             -                     *TSS                   =================bZIP_DOF<-----------HVH21     <------NtERF2                   ---------->DOF2 <---------REM1(1)<-------MYC2   <-----------STF1      <---------ANAC46 ------->DOF2      ==========================================bZIP_DOF<-----------TGA1   <---------LBD16   gaaagagagaaacaaaatatcaaaagaaacgatacagttgtagacgcttttacacgtgggtaaagttgccacgtcatcaccagtcaatttggcggaatga  17217100                                                 <---------CCA1(1)                  ------>ZmHOX2a(1)                                                 <---------RVE1(1)    <---------ARR11(3)                      <---------CCA1(1)         <---------ARR11(3)    --------->ARR14(2)                     --------->ARR11(3)         --------->ARR11(3)    --------->ARR11(3)        <----------DOF2                         <---------AHL20(1)   --------->CCA1(1)        <---------DAG2<---------RVE1(1)         --------->AHL20(1)   --------->RVE1(1)     ------->TEIL    <---------ARR11(3)        --------->YAB1 ------->GAMYB <---------ALFIN1------>ZmHOX2a(1) ==================bZIP_DOF                 ---------->DOF2 <---------At4g35610 --------->ORA47(1) -------->CCA1(2)   <<<<<<<<<RAP2.2       <---------YAB1    --------->At4g35610--------->DEAR3(1)  <-   agagatgaaactttttggttttagatatttcaaacacaaaaaatatcaaagatattttcttcaactgcaaaatatcttccaccgtcctcttctcctctct  17217200                               <----------DOF2                              <---------ANAC58                              <---------ANAC46                  ---------->ID1                                                <----------DOF2            <----------DOF2   <---------ANAC58                             <-----------GT1        <----------DOF2    ---------->ID1                              <---------CCA1(1)     <---------YAB1      <-----------RAV1(1)        <---------DAG2     <---------RVE1(1)    --------->KAN4(2)  <XXXXXXXXXXXXXXXXXXXXXMIR833-3P                --------->ARR11(3)   <---------KAN4(1)<----------DOF2                 <----------DOF2   <---------ARR11(3)      -------  <---------YAB1 <-----------GT1        <-----------GT1              --------->YAB1    <---------ATHB12 --------YAB1  <------------------------ANAC81  ----------->HVH21   <---------YAB1  <---------AHL20(2)   cttgattattctttctttttttcttttttgttgcttttggtttaacttctctgactttttttttttgtttatgatattttctctttttaatcaatggaaa  17217300                                <---------AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                           <---------AHL20(2)                           --------->AHL20(2)           <------NtERF2                       <---------YAB1                 --------->ANAC58               <-----------GT1                     --------->YAB1                   --------->ANAC46  --------->ATHB12<---------DAG2                 <---------CCA1(1)                    --------->ANAC58 <---------AHL20(2)        ----                 <---------RVE1(1)          <----------DOF2         --------->AHL20(2)  <----------DOF2                --------->ARR11(3)         <---------DAG2        <------ZmHOX2a(1)<---------ARR14(2)                <---------ARR11(3)     <---------WOX13(1)      <---------TOE2(3)  --------->ARR14(2)- --->DOF2  --------->TOE2(3)--------->AHL20(2)       --------->RAP2.6(3)<---------AHL20(2)   <-------   gtagacaactcattcttagatatttataaataattttatagattgccttttttaagacggcattttaggattatttattgggacgattcacttttcttat  17217400               --------->ANAC58               --------->ANAC46               --------->ANAC58              ------->MYC2              <-------MYC3              ------->MYC3     --------------->AtSPL8             --------->YAB1   <---------ICU4                <---------YAB1   --------->YAB1                --------->ICU4   <--------ATHB1     <---------TOE2(3)<---------YAB1            <---------ANAC55(2)               --   --------->ATHB51  --------->YAB1 <---------YAB1  --------->AHL20(2)                            ---  --------->ICU4    <---------ATHB12--------->ICU4  <---------AHL20(2)                            ---  <---------YAB1    --------->ICU4--------->YAB1    <---------AHL20(1)      --------->HSFB2a(2)  ---- ----->YAB1<---------ALFIN1  <---------TOE2(3)      --------->AHL20(1)      <---------HSFB2a(2)  <--- -------->YAB1<-------MYC2  --------->MYB52(1)     --------->AHL20(2)    <----------DOF2        <---- --YAB1 <-----------GT1 <------ZmHOX2a(1)     ----------->GT1    --------->ANAC55(2)          <------   tagaataattgtaccacatgcaatgaggattaacgatgattatgaaaatagaaataaattgactattacatgtctcttttggaagagtgttttttttttc  17217500  Previous    Next  AGI:  At5g42900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75496.1) Range:  from: 17214869    to: 17217021    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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