Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ANAC55(2)               <---------ANAC58          <---------ANAC58               <---------ANAC55(2)----------->ARR10               <---------ANAC58 <---------ANAC46             <-----------GT1  <---------ANAC58    --------->ANAC58          <---------ANAC58    --------->ANAC58          <---------ANAC46        --------->YAB1                  ----------->GT1   --------->DAG2             <------MYB46(1)      --------->WOX13(1)             <------ZmHOX2a(1)  ---------->DOF2             <------MYB83<----------DOF2            --------------->AtSPL8 --------AHL20(2)        <---------AHL20(2) ----------->HVH21 <----------DOF2    <----------ID1   <-- ------->AHL20(2)     ----------->GT1    <---------ANAC58---------->DOF2      ---------->DOF2   -----   tttaaaaagcaaatgttacttatctagttatttggtgtgatttgctttgacatcaattagaaagctttgggacagtacttaaaaggactagtaaaaaaaa  17213600                                                     <---------TOE2(2)         --------->ICU4     <---------MYB46(3)   --------->HSFB2a(2)       ---------->DOF2   <------ZmHOX2a(1)       <---------HSFB2a(2)   >>>>>>>>>TBF1      <------ZmHOX2a(1) <---------MYB46(3)                                          < --------ID1       <-----------RAV1(2)<---------MYB52(1)                           <----------DOF2 <- ---->MYB52(1)     <---------LBD16  <---------YAB1   <---------TOE1(2)     <----------DOF2 <---------SPL7   acgaagaagaaaagattagtttcaggaggattgttgttctgtttgttcgttctcgcaggtttgtgtttgatttcatgcttttgggcttttggccgtatgg  17213700                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                  --------->ATHB12                                             <-------TEIL                                          <---------ANAC58             --------->ICU4               <---------ANAC46 <---------ANAC46      <---------ANAC46              --------->ALFIN1<---------WOX13(1)                    <----------      <---------ANAC58           --------->DAG2 <---------WOX13(1)                    <--------------      <---------ANAC58         ---------->DOF2 <------------CBF             <----------DOF2  <------- ----------DOF2            <---------ZAT6 <---------ANAC58 <---------ANAC55(2)        ------>ZmHOX2a(1) --------DAG2<-----------RAV1(1)--------->DAG2--------->ATHB12         --------->YAB1--------->TOE2(3)   gccttttgccttgtaatgttgtatttttagtggaaaaggtgtttgcgttcattgatttattatgtgaaaccgattatacttttatttcctaaatgttgta  17213800                                                      --------->YAB1                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                   ------>MYB83                               -------                                                   ------>MYB46(1)                        --------->At4g35610                                               --------->ARR11(3)                 --------->ARR11(3)                                               <---------ARR11(3)                 <---------ARR11(3)                                           ---------->DOF2                       --------->YAB1 -RAV1(1)                <-----------TBP  <---------AHL20(2)                    <---------TOE2(3) -AGL15      <---------At4g35610          --------->AHL20(2)            --------->DOF5.7(2) <------ZmHOX2a(2) --REM1(1)   --------->At4g35610  <----------ID1 <---------MYB59      ----------->GT1     <---------At4g35610   gttttatggagtttcagctctatttgaatttataaaacgactaattaaagacctaattaaaacatttctgagacgttaaactaagataattcagatcaca  17213900                                 --------->AHL20(2)                              --------->ARR11(3)                              <---------ARR11(3)                            --------->ICU4                --------->MYB52(1)                   <-----                       --------->ANAC58       <---------YAB1--------->YAB1                     <-----                       --------->ANAC58       ------------>CBF                       <------MYB83                 ----------->TBP <---------AHL20(2)--------->YAB1   <-------TEIL     <------MYB46(1) <-----------GT1 --------->AHL20(2)<------------CBF--------->AHL20(2)           <---------AHL20(2) ----->CBF       <---------YAB1 --------->AHL20(2)----------->TBP  --------->AtLEC2  ----------->GT1   atttcacatttcatttcttataaataagcaaagatttaattgttgtttatcaataaaaacaaacagaacatgcattaagcatatatttggttatactaag  17214000                                                                                                   --                                                                                                 ----                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                               --------->ATHB12                ------                                                               <---------ICU4                 <------                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------AHL20(2)                                     <---------YAB1             ----------->RAV1(1)      ------------>CBF     --------->YAB1         <---------ANAC46                       ============  <---------AHL20(2)    --------->WOX13(1)       <---------LBD16  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----TOE2(3)     <---------MYB52(1)   <----------DOF2<----------DOF2                 xxxxxxxxxxxxxxxx ----TOE1(3)  ---------->ID1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            xxxxxxxxxxxxxxxxxxxxxx   gttttttattcaatttctcgttatgtctatcaaaaatgtgctttcacttcttgcggttttatgcatcattgtttctgtaaatgctcaattgccacagatt  17214100                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                             <xxxxxxx                                  --------->ARR14(2)                                      --------->KAN4(2)                                  <---------ARR14(2)                                     xxxxxxxxxxxx                              --------->MYB46(3)                                         xxxxxxxxxxxx                             ------>MYB46(1)                                             <----------TaMYB80                             -------->P         --------->ICU4                           <---------KAN4(1)                      <---------ANAC58     --------->ANAC58                              <---------GLK1(1)                      <---------ANAC58------>ZmHOX2a(1)                                 --------->ARR11(3)                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                  <---------ARR14(2)                   --------->ARR14(2) --------->LBD16                                   --------->ARR14(2)                   <---------ARR14(2)<---------ANAC46                                  xxxxxxxxxxxxxx                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                              xxxxxxxxxxxxxxx              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------ANAC58               <---------ANAC46           <---------DAG2    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    <---------WOX13(1)       --------->ARR14(2)    ------>MYB83  --------->ANAC58                       ----------->HVH21      <---------MYB52(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                  xxxxxxxxxxxxxxxx>smallRNA(s)    xxxxxxxxxxxxxxxx>smallRNA(i) <---------GLK1(2)    <---------ANAC58           --------->LBD16   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   xxxxxxxxxxxxxxxx>smallRNA(s) ---->ZmHOX2a(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         <---------ANAC58 <--- ------->RAV1(2)  <xxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->ANAC55(2)       <---------ANAC58 ---- --->GLK1(2)  xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ANAC55(2) ---GLK1(2)<----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ========RAV<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<------ZmHOX2a(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) xxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) x>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ANAC55(2)       --------->ANAC55(2) <   cctggtccgtttccttttccatttccgttccaaccgattcctggtatgccaggattacttgacataacaaaatgtttgtcatccgtgatggatattccca  17214200                                                     <---------LBD16                                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                                     xxxxxxxxxxxxxxxx>smallRNA(s)                                                     <-------TEIL                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                 --------->MYB59           <---------HSFC1(2)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->HSFB2a(1)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------HSFB2a(1)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------RAV1(2)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ----HSFB2a(2)                            <---------MYB52(1)                         --------->ANAC58 ---LBD16  --------->HSFC1(2)           --------->MYB59          ---------->DOF2     --------->ANAC58 xxxxxxxxxxxxxxxsmallRNA(si3)        <---------ARR14(2)    <---------MYB46(3)    xxxxxxxxxxxxxxxxxxxx xxxxxxxxxx>smallRNA(si3)            --------->ARR14(2)   <xxxxxxxxxxxxxxxxsmallRNA(i)     <xxxxxxxxx xxxxxxxxxxx>smallRNA(si3)          --------->HSFC1(2)    <xxxxxxxxxxxxxxxxsmallRNA(s)    <xxxxxxxxxx xxxxxxxx>smallRNA(si3)             --------->HSFB2a(1)  <---------ANAC46       <---------At4g35610 xxxxx>smallRNA(si3)                <---------HSFC1(2)<---------RAP2.6(2)       xxxxxxxxxxxxxxxxxxxxx ------At4g35610                    <---------HSFB2a(1)  <---------ANAC58       --------->At4g35610 ----->At4g35610            --------->ATHB12 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxx -------TEIL               <---------YAB1----------->GT1 <---------ANAC58      xxxxxxxxxxxxxxxxxxxxxx   gatgcattacagaaatttctcaatctattttcattggaaaattcggtaatttaggtccggcttgttgcaaagcatttttggatgctgaagccaattgtat  17214300                                                                          ----------->HVH21       <--                                                                          <---------ETT(1)       ----           <---------ATHB12                                               --------->ANAC46       ---- xxx>smallRNA(fl3)                                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxsmallRNA(fl3)                               <---------ANAC58   ------>NtERF2      <--- xxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ------>ZmHOX2a(1)        ---- xx>smallRNA(fl3)          ------>ZmHOX2a(1)               <---------ANAC58------>NtERF2         <--- xxxx>smallRNA(si3) <---------DAG2                         <---------ANAC46----------->RAV1(1)   <--- x>smallRNA(si3)    <----------DOF2 ---------->DOF2   <---------ICU4<---------ALFIN1       <---------   gcccaaaattccattcattccgctttttcctccaatgctaaaggaacaatgttcaagaattgctggtgcaactcctccgacaccaaaatagagctttaat  17214400        <---------ARR11(3)        --------->ARR11(3)      --------->AHL20(2)        <---------AHL20(1)      <---------AHL20(2)  <---------AHL20(2)           <---------AHL20(2) -------AHL20(2)               <---------AHL20(1) ----->AHL20(1)                --------->AHL20(1) ----->ARR11(3)            --------->AHL20(2)     <---------ANAC58 ------AHL20(2)        <----------DOF2            <---------ANAC58                                  - ----->AHL20(2)      ---------->ID1         <----------DOF2                                      ---- ------AHL20(1)     <-----------GT1     <-----------GT1<----------DOF2                         <----- ------ARR11(3)---------->ID1  --------->AHL20(2)--------->At4g35610                       <---------YAB1 -DOF2  --------->AHL20(1) <---------AHL20(2)    <---------At4g35610--------->ANAC46    --------->ICU4   atattttaaaaatatttgtttttttctttttaatttattttttaaacttttagcttactttacatgttatactcaaaaaaaaaaaaaaacatgatgatac  17214500  Previous    Next  AGI:  At5g42895.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09545.1) Range:  from: 17214023    to: 17214391    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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