Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->TGA1a                                                          --------->ANAC46                                                          --------->bZIP60(2)                                                         ------>NtERF2                                                        <---------ALFIN1                                                      <------NtERF2                                                      ------>NtERF2                                                     --------->ANAC46                                                     --------->ANAC58                                                     --------->ANAC58                                                    --------->SPL7                                                    --------->ZAT18                                                   --------->ATERF1(1)                                                  <---------SPL7                                                <------NtERF2                                               --------->LBD16                     --------->ANAC58                                              --------->DEAR3(1)               --------->ANAC58           ----------->GT1                   <---------LBD16                   --------->ANAC58         <--------P                          --------->ATERF1(1)           <---------ANAC46         <---------MYB52(1)                  <------NtERF2<---------TGA1a------>NtERF2           <---        <---------MYB52(1)                  <---------RAP2.3(1)          --------->LBD16        <----     <---------LBD16                     <---------ATERF1(1)            <---------DEAR3(1)      <---- -----MYB46(1)                          <---------ARR14(2)<---------O2  --------->ANAC46      <------ -----MYB83--------->MYB52(2)           --------->ARR14(2)--------->O2 <---------LBD16        ------- ------>MYB111(1)        <-----------ARR10--------->ATERF1(1) <---------DEAR3(2)   --------->ANAC58 -----P--------->LBD16   --------->GLK1(2)<---------ABI4(2)<-----------HVH21<---------SPL7--------->At4g35610   ttggtactccggttagtttaaaccgagaatcaactctccaaggatgcgccggagtccgccacgtcggtctgtctccggcgtaagcacgaattagcttcac  17199500                                                                                        ---------->DOF2       <---------GLK1(1)                                                              --------->ANAC46   <---------HSFB2a(2)                                                        --------->ARR14(1)   --------->HSFB2a(2)                                                       <---------GLK1(2)  <---------LBD16                                                    ---------->DOF2  <---------ANAC55(2) ------>ZmHOX2a(1)                          ----------->HVH21     --------->YAB1      --------->ANAC58 ------ALFIN1                           <---------At4g35610      <---------ATHB12     --------->ANAC58 -------------AGL1               <---------TOE2(2)              ------>MYB46(1)<-------TEIL -----At4g35610        ----------->GT1  --------->At4g35610     ------>MYB83 --------->ARR11(1) ---ALFIN1           <---------ANAC46<-------TEIL              --------->WOX13(1)  <------ZmHOX2a(2) -->REM1(1)  ------>ZmHOX2a(1)   <---------TOE1(2)         <-----------GT1 ----------->ARR10        -   ctcctctggaaattcctctagagtcttgtaaatcacaggttcagctctaacacagtctgatttaccaatcaaaaagatagattcgatcacgaaagatgga  17199600                                                                                 <---------DEAR3(1)                                                                                 <---------At1g77200                                                                                 <---------RAP2.3(3)                                                                                 <---------DREB2C(2)                                                                          <---------YAB1                                                                          =====================HOX2a_HOX2a                                                                   --------->MYB55(2)                                                                   <---------MYB46(3)                                                                  --------->ALFIN1<---------RAP2.3(1)                                                                  <---------AtMYB61     <------ZmHOX2a(1)                                                                  <---------DEAR3(1)<---------ANAC46                                                           ----------->HVH21     <---------DEAR4(1)                                                           --------->WRKY12      --------->ETT(1)                                            <---------ANAC46<---------WRKY18(1)<-----------HVH21                                          --------->ZAT18  --------->WRKY38(1)<-----------RAV1(1)                                         ----------->HVH21 --------->WRKY45--------->ATHB12                     ----------------->AGL1 <---------bZIP60(2)  <---------MYB52(1)<------NtERF2        --------->GLK1(2)      ---------->DOF2           <----------DOF2  <------ZmHOX2a(2)       <-- -------->ATHB12  ------------------------>ANAC81      --------->ZAT2<---------ANAC46   =============   atcgattgagaattttgaaaaatccctaagagagaaagagagagtgacctggacaccagctttgaccggtggtgggatcattgtcggcgaggaagagtat  17199700                                                                  <---------ARR14(2)                <---------ANAC58                                  --------->ARR14(2)                <---------ANAC46                                  <---------GLK1(2)                <<      ------>ZmHOX2a(2)<---------ANAC58                        <---------WOX13(1)        --------->TGA2(2)    <---------ARR11(3) <---------ANAC58                     <-------TEIL                <-----------TGA1    --------->ARR11(3) <---------ANAC46                    <--------P                  --------->bZIP60(2) -------AHL20(2)<---------ANAC58                        <---------TOE2(3)              --------->ANAC46 ============HOX2a_HOX2a            --------->ARR11(3)  <---------TOE1(2)  <---------ALFIN1   <------   gaaattgatcttgctacggcttgtttcgtctgatttcagttcttgtaaactcgattccaaggttgatggattcgcgtccaccttcttcaacgtcatcttt  17199800                                <---------DOF5.7(2)                            <---------ANAC58<---------DAG2             ------>NtERF2  <---------ANAC58<----------DOF2     <<<<<<<<<TBF1    <---------YAB1       <---------DAG2                 <---------ICU4<------------CBF  <<<<<<<<<TBF1   <---------ARR14(2)    <-----------GT1       --------->ARR14(2)      <---------YAB1 <<<<<<<TBF1----------->HVH21 --------->DOF5.7(2)  *TSS       <---------ARR14(2) <----------DOF2 ----DOF2   --------->DEAR3(1)<---------MYB52(1)  <---------YAB1         <---------ATHB12         <--   cttcttcttcttctccgacgaattctgatttcgttaccgagtttacctttttctgattagaccagacctgctctaatcaaggccttttcttattggaccg  17199900                                  <------------CBF                                --------->AHL20(1)                                    <-----------GT1                                <---------AHL20(1)                                   <-----------GT1                                <---------AHL20(2)      ----------->GT1             <---------AHL20(2)                                --------->AHL20(2)     ----------->GT1           <---------AHL20(2)                     --------->AHL20(2)              ---------->DOF2             <---------AHL20(1)                     <---------AHL20(2)         <---------------AGL15            --------->AHL20(2)                    <---------AHL20(2)          --------------->AGL15       <---------AHL20(2)                    --------->AHL20(1)         ======================================================                    <---------AHL20(1)         ----------------->AGL3       --------->AHL20(2)                    --------->AHL20(2)     <----------DOF2              <---------MYB46(3)    <------ -------ZAT2   ------------>CBF--------->AHL20(2)<----------DOF2       <--------P--------->AHL20(1)   agctactcagattaaggcccaatttattttgaaataaattgtattctttccctttaaaagttaaaaacaaatggttgttttaatattttaacttatttta  17200000                        --------->YAB1                        <---------ICU4           <----------DOF2 --------->YAB1           <---------DAG2 <---------YAB1          <---------------AGL15                                             --------->YAB1         --------------->AGL15         <--------HAHB4                      ------->TEIL             -         ----------------->AGL1        <---------ICU4                   <---------YAB1           ----         <-----------------AGL1        --------->ATHB51               <---------ICU4           <-----  --------->YAB1       --------->ICU4 <---------YAB1                  --------->YAB1      <------ZmHOX2a(2) ========================MADS_MADS    --------->ICU4                 --------->ICU4      <---------ARR11(3) ---AHL20(2)      <------ZmHOX2a(1) --------->YAB1              --------->ETT(1)        <---------GLK1(1)   aaaattgtaatccctttttaggacaattatcacaaatagcataattagcaaataagagctctgaggtcggaattatgaacataattttggagatcagaat  17200100                                                      <---------CCA1(1)                                                      <---------RVE1(1)                                                     <---------ARR11(3)                         ---------->DOF2             --------->ARR11(3)                      --------->YAB1           <---------MYB46(3)                                   <                   --------->YAB1             <---------YAB1             <---------YAB1            -- ------>GAMYB <---------ATHB12              ----------->GT1        <---------YAB1              <----- ----->MYB52(1)--------->YAB1     <---------YAB1   ----------->ARR10<---------AHL20(2)       <------- ----KAN4(2)--------->WOX13(1)<---------GLK1(1)--------->ATHB12 --------->ICU4  <---------TOE2(3)  <-   aaccgaaaacttttcaatcaaaaatcataaagaattctcatcgaaatggtgattagatatttcgaaatttttattttgatttaagaaaattgtagttact  17200200                                                             <---------AHL20(2)                --------->ICU4                               --------->AHL20(2)                <---------YAB1                             --------->TOE2(3)              --------->YAB1                               --------->YAB1              <---------ICU4                             <---------TOE2(3)             <---------AHL20(2)                          <---------YAB1   --------->AHL20(2)                                  <---------AHL20(2)   <---------AHL20(2)                                  --------->AHL20(2) ---------AHL20(2)                                    --------->AHL20(2) ------->AHL20(2)                                   <---------ICU4                               ---- ----YAB1    <---------ATHB51                   <-----------GT1                                 <---- ----GT1 <---------YAB1                        --------->AHL20(2)                               <---- --------AHL20(2)                           <---------AHL20(2)<---------AHL20(2)     --------->ZAT18   attaattttttataaataatgaataagtgtaaactagttattgtataaatttactaattaatattaattttaaaaatttgcaaaatgtgtgctactataa  17200300                                 --------->LBD16                                                    <                                <---------ANAC46                      <-----------ARR10     ---------           <---------AHL20(2)   <---------ANAC58                      ------->TEIL         --------->YAB1          --------->AHL20(2)    <---------AtLEC2    ---------->DOF2   --------->ARR14(2)   <--------HAHB4 ------->GT1                <----------DOF2     <---------AHL20(2)    <---------ARR14(2)  <---------YAB1 -----TOE2(3)      --------->GLK1(2)       --------->AHL20(1)    ----------->GT1  <---------At5g28300 -----TOE1(3)  --------->YAB1   <---------ANAC58--------->AHL20(2)   <---------CCA1(2)  <---------CCA1(2)   ggtatttctccattaaataagaatttgatactttgcgtgaaaaaacatattaaaaaaagaaaacaaaatgtgaatcttctcgtttactgtgtatcattaa  17200400  Previous    Next  AGI:  At5g42850.1    Description:  electron carrier/ protein disulfide oxidoreductase. similar to unnamed protein product [Vitis vinifera] (GB:CAO15096.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Protein of unknown function DUF953, thioredoxin-like (InterPro:IPR010357) Range:  from: 17198935    to: 17199851    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g42860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45688.1); similar to H0814G11.12 [Oryza sativa (indica cultivar-group)] (GB:CAJ86345.1); similar to CAA30379.1 protein [Oryza sativa] (GB:CAB53482.1) Range:  from: 17200294    to: 17202144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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