Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <------NtERF2                                                                                           ------>NtERF2                                                                                          --------->DEAR3(1)       ----------->RAV1(1)                                                                <---------DEAR3(1)  <------MYB83                                                                        <-------TEIL  <  <------MYB46(1)                                        <---------TOE2(3)         <---------HSFB2a(1) -------->ALFIN1                                        --------->DAG2            <-------TEIL------- --------P        ----------->HVH21                    ---------->DOF2 --------->ANAC58  ---------->ID1 -------RAV1(2) <---------ZAT6                  --------->GLK1(2)      --------->ANAC58 <-----------HVH21   aggttgggacaacagatagtgtgatgggtctgcccaaagaattgactgagaaactgataaaggaagtattggcaagcacataggtacattcgtcgcctct  17171600      <---------ANAC46    <------MYB46(1)                                                        --------->WRKY18(1)    <------MYB83         <---------YAB1       --------->AHL20(2)       <---------At5g28300         <-   <---------AtMYB61   <------ZmHOX2a(1)      <---------AHL20(2)  <---------TOE2(3)          <------- -----------RAV1(1)   --------->ICU4   <---------ANAC46        <----------DOF2              <-------GAMYB -->At4g35610      <---------ANAC46   <---------LBD16        --------->At4g35610            <--------   gaatgttggtgtattcatgttgtgaggattatagataagtttcggagtttaatttgggaaatgagcttaatgttacagtcaaactagtttattcagttgt  17171700                                                                                       --------->MYB52(1)                                                                                    --------->MYB46(3)                                                                                   ------>MYB83                                                                                   --------->ANAC58                                                   ----------->GT1                 --------->ANAC58                                                   <---------ANAC58              --------->AtMYB61                                                   <---------ANAC58             --------->MYB46(3) ----------GT1                                     <---------ANAC46<---------ANAC58------>MYB46(1) --MYB52(1)                    <-----------------AGL1  <---------ARR11(3)  --------->YAB1           < -At4g35610             --------->TOE2(3)   <---------WOX13(1)     <---------ANAC58--------->ANAC46 -   tttactacctcttgtttctgacttaacctttagactggaattggtaattgatagcgtgatattagagaggcttaccatcaaaaccacccaaaccgaagta  17171800                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                           --------->ANAC55(2)              <---------MYB59                                       <------MYB46(1)        --------->ANAC55(1)              --------->TOE1(2)                                     <------MYB83           <---------ANAC55(1)              --------->TOE2(2)                                    --------->MYB111(1)     --------->ANAC58            ------->TEIL                                           --------->MYB46(2)      --------->ANAC58       --------->At4g35610                                         --------->MYB111(2)     ----------       ----------->RAV1(2)                                         <---------AtMYB61       <---------ANAC58    --------->DEAR3(2)                                         <------MYB46(1)             <---------ANAC58  --------->MYB52(1)                           --------->MYB52(1)  --------->MYB59         <---------ANAC55(2)  ------>MYB46(1)              <---------TOE2(3)               <------MYB83 <---------MYB52(2)   <---  ------>MYB83--------->TOE2(3)<---------TOE1(3)<---------At5g28300<---------MYB46(3)      <---------ANAC46 ---------MYB59          --------->AHL20(2)   <---------SPL7  --------->MYB59         <---------MYB46(3) -------->AtMYB61      ----------->GT1<-----------RAV1(1)     <---------AtMYB61 --------->MYB46(3)<--   aaccaaaccggctgaacctaagtttaagtaaataaggtttgtgttggacttacggtctcttggtttggtttggtagcccctaaccaattggttacgtaat  17171900     ----------->GT1     --------->LBD16   <---------LBD16                                                        --------->DAG2 <-----------GT1                              <-----------HVH21          ---------->DOF2 ------AHL20(2)                        <-----------HVH21             --------->TOE2(3) ----->AHL20(2)                   <---------ARR14(2)           --------->ANAC58 ----->AHL20(1)                --------->ANAC58                --------->ANAC46                    -- ->GT1      --------->ANAC46   --------->ANAC58                --------->ANAC58                   --- ------AHL20(1)              --------->MYB52(1)               --------->WOX13(1)              ------- -------AHL20(2)     <-----------RAV1(1)----------->HVH21    ---------->DOF2             <----------DOF2   ttatttccggttaaacacaagttttgttggaaaacggaaactgtgactggtcactagtcactatcaagcagcctaaaaagtatcgactcttctttatcaa  17172000                                                              <---------YAB1                                                             --------->TOE2(3)                                                            <---------ICU4                           --------->ZAT14                 <---------YAB1                           <---------ZAT14               <---------ICU4                           <---------ZAT18               --------->YAB1                         -----    *TSS                 --------->ANAC46               <---------YAB1                          <---- ------->DAG2         <---------ZAT14                 --------->YAB1                  ---------->DOF2 ------->DOF2         --------->ZAT14          <<<<<<<<<TBF1--------->YAB1        ---------->DOF2 -->YAB1       <----------DOF2        <-----------GT1 <---------ICU4   <---------------------WRI1   aaaagtttacacaaacactttctctccactgaactcattttctctcttcttcttcatcatcatcatcaatggatgagataaaaccaaagaaagaagagaa  17172100                                --------->LBD16                                --------->At5g28300     --------->ARR11(3)                --------->TOE2(3)                       <---------ARR11(3)                ------->MYC3                --------->TOE1(3)                     <---------MYB52(1)     ------>MYB46(1)      <--       <---------O2            <---------ANAC46  <-------PIF5                --------->ANAC58    <---       <---------bZIP60(1)     <---------ANAC58  ------->PIF5                ------>MYB83 <-------MYC3       --------->O2            <---------ANAC58 --------->ANAC58             --------->ANAC58    ----       --------->bZIP60(1)   <---------At5g28300--------->ANAC58   --------->ANAC58      --------->ANAC58 ---->GLK1(1)   <-----------HVH21----------->HVH21 <-------TEIL    --------->ANAC58      --------->ANAC58 -----GLK1(1)  <---------bZIP60(1)            <---------ALFIN1     --------->AtLEC2    <---------ALFIN1   ttccaaacgacgtcgtaacgtcaaacccatttgccgtgaaactggagaccacgtccattatcttccaacatgcaaaaccaagcccaaacccacgcgtact  17172200                <------ZmHOX2a(2)               --------->ARR14(2)               <---------GLK1(2)          <---------ALFIN1          --------->DEAR3(1)          --------->AtMYB61         <---------ABI4(2)         <---------MYB55(2)         --------->MYB46(3)        <---------ATERF1(1)        ------>NtERF2       <---------ALFIN1       --------->RAP2.3(3)       --------->DEAR3(1)      <------NtERF2     ------>NtERF2                                                                             ------     <---------ATERF1(1)                                                                       ------    --------->ANAC46                                                                        ---------    --------->ANAC58                                                                        <--------    --------->ANAC58                                                                  --------->GLK1(1)  --------->ANAC58                                         <---------YAB1        --------->At4g35610  --------->ANAC55(2)                              --------->ANAC46              <---------At4g35610  --------->ANAC58                                 --------->ZAT6                ------>NtERF2 <-----  <---------ANAC55(2)        --------->YAB1        <---------ALFIN1             --------->DEAR3(1)  --------->ANAC46 ------>ZmHOX2a(1)          --------->ANAC58               --------->ANAC58 <------ ---------HVH21<---------ARR14(2)             --------->ANAC46               --------->ANAC46 <------ ------ICU4  --------->MYB46(3)               --------->ANAC58               --------->ANAC58 ------- ----->YAB1  --------->DEAR3(1)  ---------->DOF2 ----------->RAV1(1)<------ZmHOX2a(1) <---------GLK1(1)   catcacgcgccaccaccgatcctcgactcaatcttcaaagtcactcacaagccacactactacgaatgcaggaagaatcacgccgctgatatcggaacca  17172300                <---------ANAC46               ------>NtERF2               <------NtERF2              ------>NtERF2                                  --------->RAP2.3(2)              <---------RAP2.3(1)                            --------->DEAR3(1)             <---------DEAR3(1)                              --------->RAP2.3(3)            <---------LBD16                                 <------NtERF2            --------->At4g35610                             --------->ORA47(2)            <---------At4g35610                             --------->RAP2.3(1)         --------->ATERF1(1)                                --------->DEAR4(2)         ----------->RAV1(2)                               <---------RAP2.3(1)         <---------At4g35610                               ------>NtERF2         --------->At4g35610                               <---------ATERF1(1)         <---------ZAT2 <---------MYB52(1)                <---------DEAR3(1)        ------>NtERF2 <---------MYB46(3)     <---------GLK1(2)<------NtERF2        <---------ATERF1(1)                  <---------ARR14(2)        <---------RAP2.3(1)                  --------->ARR11(3)       <---------DEAR3(1)                    <---------ARR11(3)          ----------->HVH21      --------->RAP2.6(3)                    --------->ARR14(2)   ------->MYC3   --------->SPL7  ------------>MYB.PH3(2)  <---------HSFC1(2)------>NtERF2      --------->HSFC1(2) --->DEAR3(1)<---------ANAC46               --------->HSFC1(2)--------->LBD16--------->ANAC46   <---- --->AtMYB61<---------ABI4(1)               <---------HSFB2a(1)   <-------MYC3  <---------ARR14(2) >ARR14(2) <---------RAP2.3(1)              --------->HSFB2a(1)   <-------MYC2  --------->ARR14(2) -ARR14(2)<---------DEAR3(1)               ----------->ARR10--------->ATERF1(1)<---------MYB52(1) ----ALFIN1<---------ATERF1(1)     --------->LBD16        --------->ANAC46 <---------At5g28300  ----- ---MYB55(2)<------NtERF2  --------->At4g35610           --------->ZAT18<-----------HVH21   --------- ---ABI4(2)<---------ERF1  <---------At4g35610--------->GLK1(2)   ------->MYC2--------->At5g28300 -->MYB46(3)--------->ATERF1(1)<---------ALFIN1  <----------DOF2 <-----------RAV1(1)  <---------ALFIN1   ccgcttacgacggctgcggcgagtttgttagctccaccggtgaagaagattctttaaactgcgccgcatgtggctgtcaccgtaacttccaccgtgaaga  17172400                 <------NtERF2                <---------RAP2.3(1)                                             <---------At4g35610                ------>NtERF2                                              ------>ZmHOX2a(2)                <---------ORA47(2)                                        <---------RVE1(1)                <---------RRTF1(1)                                        <------ZmHOX2a(2)     -----                <---------DEAR4(2)                                       <---------ARR11(1)    <-----                <---------ATERF1(1)                                      --------->ARR11(3)    <-----                <---------ERF1                                           <---------ARR14(2)   <------               --------->DEAR3(1)                                        <---------ARR11(3)   <------               <---------DEAR3(1)                                        --------->ARR14(2)  <-------               <---------RRTF1(3)                                       <---------CCA1(2)    --------               <---------RAP2.3(3)                                      <---------ARR14(1)   <-------               <---------RAP2.3(2)       <---------ARR11(3)            <---------DEAR3(2)   <--------      --------->LBD16                    --------->ARR11(3)           <---------TOE1(2)  --------->SPL7     --------->LBD16            <---------ARR14(2)                  <-----------HVH21   --------->MYB52(1)    <---------LBD16<----------DOF2 <---------HSFB2a(2)             <---------ANAC46    ----------->HVH21 -----ZAT6    <---------ABI4(1) --------->ARR14(2)         <-----------HVH21<----------DOF2<---------RAP2.3(1) ------>GT1 <---------DEAR3(1)<---------HSFC1(2) --------->ARR11(3)<---------ANAC58    <---------SPL7 >REM1(2) --------->MYB52(1)  --------->HSFC1(2) <---------ARR11(3)<---------ANAC58   <---------DAG2   gttaatcccggagaacggcggcgttactgagacggttcttgaagttctcaagatttcatcgtgtcagtttcgtcggatcttttgctcaccttacggcggt  17172500  Previous    Next  AGI:  At5g42770.1    Description:  similar to Maf family protein [Arabidopsis thaliana] (TAIR:AT5G66550.1); similar to unknown [Populus trichocarpa] (GB:ABK92653.1); contains InterPro domain Maf-like protein (InterPro:IPR003697) Range:  from: 17169227    to: 17171706    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g42780.1    Description:  ATHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27); DNA binding / transcription factor. similar to ATHB22/MEE68 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G24660.1); similar to ZF-HD homeobox domain-containing protein [Solanum tuberosum] (GB:ABO92969.1); contains InterPro domain Homeobox domain, ZF-HD class (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region (InterPro:IPR006456); contains InterPro domain Homeodomain-related; (InterPro:IPR012287) Range:  from: 17172004    to: 17172985    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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