Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                            ---------                                                                                            <------NtERF2                                                                                           <---------ATERF1(1)                                                                                           <---------RAP2.3(1)                                                                                           <---------ERF1                                                                                           ------>NtERF2                                                                                           <---------DEAR4(2)                                                                                          --------->DEAR3(1)                                                                                          --------->ATERF1(2)                                                                                <---------ARR14(2)<--                                                                                --------->ARR14(2)<--                                                                           <---------DEAR3(1) <------                                                                        <---------MYB46(3)<---------RAP2.3(3)                                                                       --------->ALFIN1   <---------ATERF1(2)                                                 <------NtERF2         <---------AtMYB61  <---------ANAC46                                               <---------DEAR3(1)     <-------PIF5        <---------RAP2.3(2)                                            <------NtERF2             ------->PIF5       ------>NtERF2                                          <---------ANAC58           <------MYB83        --------->ATERF1(1)                                          <---------bZIP60(1)        <------MYB46(1)     <---------ABI4(1)                                          <---------ANAC58           <---------At4g35610 <------NtERF2                                          <---------ANAC46           <---------ZAT2     <---------RAP2.3(1)                       --------->ATERF1(1)<---------bZIP60(2)       <---------MYB46(3)  <---------ATERF1(1)                       <------NtERF2      --------->bZIP60(1)       --------->MYB55(2)  <---------ORA47(2)                      --------->LBD16    --------->ATERF1(1)        --------->MYB111(1)<---------RRTF1(2)                     <---------ANAC58    <------NtERF2             <-----------RAV1(2) <---------RAP2.3(2)                     <---------ANAC58   --------->ABI4(2)          <---------ANAC46    <---------RAP2.6(2)                     <---------DEAR3(1) ------>NtERF2              ==============================RAV-                     <---------ANAC46   <---------ATERF1(1)   =================RAV     <---------DEAR3(1)                    <---------LBD16    --------->ALFIN1       <-----------RAV1(1)     <---------LBD16       <------ZmHOX2a(1)  <------ZmHOX2a(1) --------->ATERF1(1) ----------->HVH21    <-----------RAV1(1) ---ANAC46        --------->ALFIN1     <---------DEAR3(1)  --------->GLK1(2) <------NtERF2<---------DEAR3(1) -MYB46(3)      <---------O2      --------->MYB52(1)    --------->ARR11(3) --------->ETT(1)<---------ORA47(2)   agagagtgaggagaagagaagtggcggaggagagaagaacggtggcgtctcggcgagagataatctgtggcaggtggtcggagatttgtgcggcggcgat  17168800         --------->ALFIN1       <---------MYB46(3)      <---------DEAR3(1)      <---------AtMYB61      --------->ALFIN1    <---------MYB46(3)   <---------DEAR3(1)   --------->ALFIN1   <---------AtMYB61 <---------MYB46(3) ---------AtMYB61 ----->MYB55(2) ------MYB46(3)                                                            --------->DOF5.7(2)    --- ------AtMYB61                                                             <XXXXXXXXXXXXXXXXXXXXMIR783 --GAMYB <---------ANAC46                                                 --------->TOE1(3)     ----- >ATERF1(1)                                                               --------->TOE2(3)     <---- ----MYB46(1)                                                       <---------ANAC58        --------- ----MYB83          <---------ZAT6                                  <---------ANAC58       <---------ANAC55(1) ---MYB46(3)<---------AtMYB61                               --------->ANAC58               <---------ANAC46 -------->ALFIN1  <---------ANAC46  --------->DAG2          --------->ANAC58 <---------DOF5.7(2)-----   tggtggtggtggtggaggtttagtgtttgaagagaagaaaggttgagaaattgggataagacgagccatggcttaacattaacgagctaagttatgtgta  17168900                                                                           <---------MYB52(1)                                                                         <---------MYB46(3)                                                                         <---------DEAR3(2)                                                                        <---------TOE2(2)                                                                        <---------DEAR3(1)                                                                     <---------O2                                                                     --------->O2         *TSS                                                        <---------bZIP60(1) ------>MYB46(3)            <----------DOF2    <---------ANAC58      --------->bZIP60(1)      ------- -->TEIL----------->GT1     <---------DAG2     <---------ANAC58      <---------TGA1a      <---------AHL20(2) -----ARR14(2)      <---------ATHB12   <---------GLK1(2)             --------->TGA1a     --------->AHL20(2) ------>AtSPL8  ------------>CBF       --------->ARR11(3)       --------->MYB52(1)       --------->YAB1 ---->ARR14(2)<-----------GT1          <---------ARR11(3)    --------->ANAC46      --------->YAB1   cccgctcatgtggtatttaccaatggtttcctttttgaacagatttttgtcttgtttttaaacacaaaacgacgtcggtttgtgaacataataaaaatgt  17169000                                             <---------------AGL15                                             --------------->AGL15                                             <---------MYB59                                             <---------DAG2                                            ----------------->AG                                            ----------------->AGL1                                            ----------------->AGL3                                            <-----------------AGL3                                            ----------------->AGL2                                           ------->TEIL                                          <-----------GT1                                       <---------------AtSPL3                                       --------------->AtSPL8                                       <---------------AtSPL8                                      <------ZmHOX2a(1)                       <---------AHL20(2)                                    <---------TOE2(3)                         --------->AHL20(2)                                    <---------TOE1(3)                        --------->AHL20(2)                                <---------ZAT2                          <---------TOE2(3)                                --------->ZAT2                         <-----------GT1                                --------->At4g35610                    --------->MYB52(1)      <-----                                <---------At4g35610                    <---------DOF5.7(2)    -------            <----------DOF2  <---------MYB52(1)              --------->MYB52(1)             <-------- ---->GT1 <---------YAB1    <-----------HVH21--------->TOE2(3)<---------TOE2(3)  <---------WOX13(1)   aaatgttgacttatctttgctaaattggtccgtcagctaaggatgtaccttatttagcaaaattaacgaaaattaacgatttaattgaaaatcaactaaa  17169100                                                                                                    -                                                                                                    <                                                                                                    -                                                                                            ---------       ---------->DOF2                                                                     <---------AHL20(2)      --------->AHL20(2)                      <---------DAG2                            --------->YAB1      <---------AHL20(2)                      <----------DOF2                       --------->HSFB2a(2) ----TOE2(3)                               <---------ALFIN1                         <---------HSFB2a(2) --->DOF2                        <----------DOF2 <---------YAB1<---------AtMYB61 <-----------GT1    - -MYB52(2)       ------>ZmHOX2a(1)      <-----------GT1    ----------------------->TaNAC69(2)      <-   gtttaaaattaaagtcatcctactcaaaattggtgctttgtttcaccacttttgataaactggtgatggtttttatgacattttttccagtaataaaagg  17169200      ------------>CBF                                              <----------DOF2 ---------->ARR10                                             <---------ICU4                 -------- ---------MYB46(3)                                            --------->ATHB12            ------->GAMYB -------->MYB52(2)                                       <-----------GT1          <---------ANAC58 ->DOF2                    *TSS                     ------>MYB46(1)<---------ANAC58     --------->At4g35610 -------->MYB111(1)        ----------->GT1          ------>MYB83   <---------ANAC58     <---------At4g35610 -------P              ---------->DOF2   --------->TOE2(3)  <----------DOF2       <---------ANAC58   ggtagttatgcaatttagtagaagttaaagggtttctaaacaaacttaaaaaccaaatttttctttattgctttgctcgagagtgcctgcaactgcaaca  17169300                                     <---------ARR11(3)                          --------->ATHB12                         <---------YAB1           <---------ANAC58   --------->YAB1           <---------ANAC58 <---------WOX13(1)    --------->GLK1(2) --------->GLK1(2)                                                  <---------ALFIN1   <---------ARR11(3)--------->ARR14(2)                                                 ------>ZmHOX2a(1)   --------->ARR11(3)<---------ARR14(2)                      <---------ZAT14       --------->YAB1 <-- ----------->ARR10   <---------GLK1(2)            <---------At4g35610             --------->HSFC1(2)< <---------TOE2(3)<---------TOE2(3)  --------->ARR11(3)      --------->ZAT14      <---------ATHB12--- --->RAV1(1)  <-----------HVH21   <---------TOE2(3)     <---------YAB1            --------->HSFB2a(1)   gttgagattttgagcgtgtcaaggattctgattgataacgatattcaagttcagcaatctcattgcagtagaaaatggaatcgaatcatcctcacttcaa  17169400       <----------DOF2    <----------DOF2  <------NtERF2  <---------At4g35610                         --------->ZAT14 -------ARR14(2)                              <---------At4g35610                     <----------DOF2 -------TEIL                                  --------->At4g35610              <---------ANAC58 ------>ARR14(2)               <-------TEIL   <---------ZAT14  ----------->GT1 <---------ANAC58------   ggtccgcttcttttcaataggtttctagttcgattcatgaactgtttctgcagtcaatttcgaacttgtgaaatctccataacttgtgctttgaatgtat  17169500                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                <---------ANAC46                -----                                                                <---------ANAC58                <----                                                                <---------ANAC58                -----                                                             <--------P                         <----                    <---------ANAC58                        <---------ANAC58          ---------------                    <---------ANAC46                        <---------ANAC58         ================               <-----------RAV1(1)           --------->DAG2 <-------GAMYB            <---------------           --------->ARR11(3)     ------>MYB46(1)          <---------MYB46(3)        <---------------  ---------->DOF2   <---------ANAC58 ------>ZmHOX2a(1)    <---------AtMYB61         <---------At4g35610 ->TEIL   --------->YAB1          ------>MYB83         <----------DOF2              --------->At4g35610   ttgctaaagctataatcttgttgcgtttcaaaaaccatcctttggaaaaattggagtcttttggttgcttattgaaatttgtttgcagctaattttggga  17169600 --->ZmHOX2a(2) ------HSFB2a(1)                --------->CCA1(2) ---ZmHOX2a(2)                 --------->ARR11(3)                              --------->ICU4 ----->HSFB2a(1)               --------->ARR14(2)                              <---------ATHB51 ---->ARR11(3)                 --------->ARR11(1)                              --------->AHL20(2) -----ARR11(3)       <---------ARR11(3)                             ---------->ID1 ---->ARR14(2)       --------->ARR11(3)                         <---------ANAC58  <---------YAB1 -----ARR14(2)     ----------->ARR10   --------->GLK1(1)        <---------ANAC58<---------ICU4 >AGL15        --------->ANAC46<---------ARR14(2)             --------->ARR11(3)-------->ATHB1 ============================================MADS_MADS        <---------AHL20(2)--------->YAB1 --AGL3   <---------ANAC58 <-----------------AG          --------->At5g28300   <---------AHL20(2) --AGL2   <---------ANAC58--------->MYB52(1)            ----------->GT1 <----------DOF2          <---   tcttcttcgattgctcgacgtaagatactaacagatatgggataccaattcactctcatggtaatttcttgttcctttgaaattattattcaaagactgc  17169700  Previous    Next  AGI:  At5g42765.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO61157.1); contains InterPro domain Twin-arginine translocation pathway signal (InterPro:IPR006311) Range:  from: 17167466    to: 17168909    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g42770.1    Description:  similar to Maf family protein [Arabidopsis thaliana] (TAIR:AT5G66550.1); similar to unknown [Populus trichocarpa] (GB:ABK92653.1); contains InterPro domain Maf-like protein (InterPro:IPR003697) Range:  from: 17169227    to: 17171706    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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