Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------ARR11(1)                              <---------ARR11(3)                      --------->GLK1(2)             --------->ARR14(2)                               <---------TOE2(3)             --------->GLK1(2)--------->ARR14(2)              <---------TOE1(3)            <---------GLK1(2)<---------CCA1(2)       <-----------GT1            --------->ARR14(2)<---------ARR14(2)    <-------TEIL ---------->DOF2         <---------WRKY18(1)            <---------ARR14(2)<-----------ARR10   <---------ARR14(2)                  <---------ANAC58 ------>At4g35610    <---------GLK1(2)            <---------GLK1(2)                   <---------ANAC58 -------At4g35610    --------->ARR14(2)           --------->ARR14(2)  --------->CCA1(2) ----------->HVH21 -----HSFB2a(2)      <---------ARR14(2)        --------->YAB1<---------DOF5.7(2)    --------->ARR11(3) ---->HSFB2a(2)  <---------At4g35610        --------->YAB1   --------->MYB52(1)     <---------ARR11(3)   agaagacttaaacagattctgcagattctccaaatctttctctgtataatcagattcactagttaacgaaagataagcagattgaagagcttgacgagtt  17168500                                                                      --------->ALFIN1                                                --------->ANAC58      <---------ANAC46                                                --------->ANAC46    <---------ANAC46                                            <----------DOF2       --------->ZAT2                                           ------>ZmHOX2a(2)      <---------At4g35610                   --------->GLK1(2)       =============================HOX2a_HOX2a                   --------->ARR11(3)    --------->ARR11(3)       <---------ZAT2                  <---------GLK1(2)      <---------ARR11(3)--------->MYB59            --------->ANAC58         <---------At4g35610<----------DOF2                             <            --------->ANAC58      <<<<<<<<<TBF1 --------->ANAC58 ------>ZmHOX2a(1)         <---------   gcatcaatgggagcaagtaagaatcttgaagacttcttcttctgatctttaagccactctttaggtcctgctgtgtgagaaaattagtttttttttcaaa  17168600                                                             --------->GLK1(2)                                                            <---------GLK1(2)                                                      --------->ZAT14                                                      <---------ZAT14                         <------                                                      --------->ZAT18                       <--------                        <---------AHL20(2)           <---------ANAC58                      <---------ANAC46                        --------->AHL20(2)           <---------ANAC58                      --------->ALFIN1                        --------->AHL20(1)           <---------ANAC46                    <------MYB46(1)                        <---------AHL20(1)          <---------------AtSPL8               <------MYB83                   <------ZmHOX2a(2)               <---------ANAC46                     <---------AtMYB61                  <---------ARR11(3)             <---------ZAT14              ---------->DOF2<------NtERF2 -----------GT1   --------->ARR11(3)             <-------GAMYB       <------ZmHOX2a(1)  <---------MYB46(3) --GT1        --------->CCA1(2)                 --------->ALFIN1 ------>ZmHOX2a(1)      --------->ALFIN1   attcacaaatttggagataagatcaataaaatgaagagtgagtgagaagtgtgttgtgtacagattcctaaggagaaggcgaaagcgggattggtggggg  17168700                                                                                                    <                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                            <------NtERF2                                                                                            ---------                                                                                           <---------RAP2.3(1)                                                                                           <---------DEAR4(2)                                                                                           <---------ERF1                                                                                           <---------ATERF1(1)                                                                                           ------>NtERF2                                                                                          <---------RAP2.3(2)                                                                                          <---------ANAC46                                                                                <---------ARR14(2)<--                                                                                --------->ARR14(2)<--                                                                           --------->ETT(1)<---------ORA47(2)                                                                        <---------MYB46(3)<---------RAP2.3(3)                                                                       <---------AtMYB61  --------->DEAR3(1)                                                 <------NtERF2         --------->ALFIN1   <---------DEAR3(1)                                               <---------DEAR3(1)     <-------PIF5        --------->ATERF1(2)                                            --------->ATERF1(1)       ------->PIF5       --------->ATERF1(1)                                          --------->bZIP60(1)        <------MYB83        <---------ABI4(1)                                          <---------ANAC58           <------MYB46(1)     <------NtERF2                                          <---------ANAC58           <---------At4g35610 ------>NtERF2                                          <---------ANAC46           <---------ZAT2     <---------ORA47(2)                       <------NtERF2      <---------bZIP60(1)       --------->MYB55(2)  <---------RAP2.3(1)                       --------->ATERF1(1)<---------bZIP60(2)       <---------MYB46(3)  <---------ATERF1(1)                      --------->LBD16    <------NtERF2              --------->MYB111(1)<---------RAP2.6(2)                     <---------ANAC58    --------->ATERF1(1)       <-----------RAV1(2) <---------DEAR3(1)                     <---------ANAC46   --------->ABI4(2)          ==============================RAV-                     <---------DEAR3(1) ------>NtERF2              <---------ANAC46    <---------RAP2.3(2)                     <---------ANAC58   <---------ATERF1(1)     ----------->HVH21      <---------RRTF1(2)                    <---------LBD16    --------->ALFIN1       =================RAV    <---------LBD16       <------ZmHOX2a(1)  <------ZmHOX2a(1) <------NtERF2     <-----------RAV1(1)    <-----------RAV1(1) ---ANAC46        --------->ALFIN1     <---------DEAR3(1)  --------->GLK1(2) <------NtERF2<---------ATERF1(2) -MYB46(3)      <---------O2      --------->MYB52(1)    --------->ARR11(3) <---------DEAR3(1) <------   agagagtgaggagaagagaagtggcggaggagagaagaacggtggcgtctcggcgagagataatctgtggcaggtggtcggagatttgtgcggcggcgat  17168800         --------->ALFIN1       <---------MYB46(3)      <---------AtMYB61      <---------DEAR3(1)      --------->ALFIN1    <---------MYB46(3)   <---------DEAR3(1)   --------->ALFIN1   <---------AtMYB61 <---------MYB46(3) ---------AtMYB61 ----->MYB55(2) ------AtMYB61                                                             <XXXXXXXXXXXXXXXXXXXXMIR783 ------MYB46(3)                                                            --------->DOF5.7(2)    --- --GAMYB <---------ANAC46                                                 --------->TOE1(3)     ----- >ATERF1(1)                                                               --------->TOE2(3)     ----- ----MYB46(1)                                                       <---------ANAC58        --------- ----MYB83          <---------ZAT6                                  <---------ANAC58       <---------ANAC46 -------->ALFIN1  <---------ANAC46                          --------->ANAC58               <---------ANAC55(1) ---MYB46(3)<---------AtMYB61       --------->DAG2          --------->ANAC58 <---------DOF5.7(2)<----   tggtggtggtggtggaggtttagtgtttgaagagaagaaaggttgagaaattgggataagacgagccatggcttaacattaacgagctaagttatgtgta  17168900                                                                           <---------MYB52(1)                                                                         <---------MYB46(3)                                                                         <---------DEAR3(2)                                                                        <---------TOE2(2)                                                                        <---------DEAR3(1)                                                                     <---------O2                                                                     --------->O2         *TSS                                                        --------->bZIP60(1) ------>MYB46(3)            <----------DOF2    <---------ANAC58      <---------TGA1a          ------- ---->ARR14(2)      <---------ATHB12   --------->ARR11(3)            --------->TGA1a      <---------AHL20(2) -->TEIL----------->GT1     <---------DAG2     <---------ANAC58      <---------bZIP60(1) --------->YAB1 ------>AtSPL8  ------------>CBF       <---------ARR11(3)       --------->MYB52(1)       --------->AHL20(2) -----ARR14(2)<-----------GT1          <---------GLK1(2)     --------->ANAC46      --------->YAB1   cccgctcatgtggtatttaccaatggtttcctttttgaacagatttttgtcttgtttttaaacacaaaacgacgtcggtttgtgaacataataaaaatgt  17169000                                             --------->TOE2(3)                                             <---------------AGL15                                             <---------MYB59                                             --------------->AGL15                                            ----------------->AGL3                                            ----------------->AGL2                                            <-----------------AGL3                                            ----------------->AG                                            ----------------->AGL1                                           ------->TEIL                                          <-----------GT1                                       --------------->AtSPL8                                       <---------------AtSPL3                                       <---------------AtSPL8                                      <------ZmHOX2a(1)                       --------->AHL20(2)                                    <---------TOE2(3)                         <---------AHL20(2)                                    <---------TOE1(3)                        --------->AHL20(2)                                <---------ZAT2                          <---------TOE2(3)                                --------->At4g35610                    <-----------GT1                                <---------At4g35610                    <---------DOF5.7(2)     <-----                                --------->ZAT2                         --------->MYB52(1)     -------            <----------DOF2  <---------MYB52(1)               <---------TOE2(3)             <-------- ---->GT1 <---------YAB1    <-----------HVH21<---------DAG2  --------->MYB52(1)  <---------WOX13(1)   aaatgttgacttatctttgctaaattggtccgtcagctaaggatgtaccttatttagcaaaattaacgaaaattaacgatttaattgaaaatcaactaaa  17169100                                                                                                    -                                                                                                    -                                                                                                    <                                                                                            ---------       ---------->DOF2                                                                     <---------AHL20(2)      <---------AHL20(2)                      <----------DOF2                           --------->YAB1      --------->AHL20(2)                      <---------DAG2                        <---------HSFB2a(2) ----TOE2(3)                               <---------ALFIN1                         --------->HSFB2a(2) --->DOF2                        <----------DOF2 <---------YAB1<---------AtMYB61 <-----------GT1    - -MYB52(2)       ------>ZmHOX2a(1)      <-----------GT1    ----------------------->TaNAC69(2)      <-   gtttaaaattaaagtcatcctactcaaaattggtgctttgtttcaccacttttgataaactggtgatggtttttatgacattttttccagtaataaaagg  17169200      ------------>CBF                                              <----------DOF2 -------->MYB111(1)                                           --------->ATHB12               -------- -------->MYB52(2)                                            <---------ICU4              ------->GAMYB ---------MYB46(3)                                       <-----------GT1          <---------ANAC58 ->DOF2                    *TSS                     ------>MYB46(1)<---------ANAC58     --------->At4g35610 ---------->ARR10          ----------->GT1          ------>MYB83   <---------ANAC58     <---------At4g35610 -------P              ---------->DOF2   --------->TOE2(3)  <----------DOF2       <---------ANAC58   ggtagttatgcaatttagtagaagttaaagggtttctaaacaaacttaaaaaccaaatttttctttattgctttgctcgagagtgcctgcaactgcaaca  17169300                                     <---------ARR11(3)                          --------->ATHB12                         <---------YAB1           <---------ANAC58   --------->YAB1           <---------ANAC58 <---------WOX13(1)    --------->GLK1(2) --------->GLK1(2)                                                  <---------ALFIN1   --------->ARR11(3)--------->ARR14(2)                                                 ------>ZmHOX2a(1)   <---------ARR11(3)<---------GLK1(2)                       <---------ZAT14       --------->YAB1 --- <---------TOE2(3)   <---------ARR14(2)           <---------At4g35610             --------->HSFB2a(1) ----------->ARR10<---------TOE2(3)  --------->ARR11(3)      --------->ZAT14      <---------ATHB12<-- --->RAV1(1)  <-----------HVH21   <---------TOE2(3)     <---------YAB1            --------->HSFC1(2)<   gttgagattttgagcgtgtcaaggattctgattgataacgatattcaagttcagcaatctcattgcagtagaaaatggaatcgaatcatcctcacttcaa  17169400  Previous    Next  AGI:  At5g42765.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO61157.1); contains InterPro domain Twin-arginine translocation pathway signal (InterPro:IPR006311) Range:  from: 17167466    to: 17168909    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g42770.1    Description:  similar to Maf family protein [Arabidopsis thaliana] (TAIR:AT5G66550.1); similar to unknown [Populus trichocarpa] (GB:ABK92653.1); contains InterPro domain Maf-like protein (InterPro:IPR003697) Range:  from: 17169227    to: 17171706    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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