Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <-----------GT1    <---------YAB1                    <---------ANAC58 <---------AHL20(2)                   <---------ANAC58 -------->YAB1                        <---------ANAC46                                    ----------- --------AHL20(2)              --------->ANAC58                              --------->AHL20(2) ------>AHL20(2)               --------->ANAC46                             <---------AHL20(2) --->AHL20(2)                  --------->ANAC58                <---------AHL20(2)  ----------->GT1 ----AHL20(2)                --------->At4g35610              --------->AHL20(2)  --------->AHL20(1) >TOE2(3)      <---------TOE2(3)------>NtERF2     <---------AtLEC2         --------->AHL20(2)  ------   tataatattgttgttctaagaatactatatcagacgccttgcttgtaacaatgcatgaatacaattttatatcgaaatttaaaatatgttattagttaaa  17131400                                                                   ----------->GT1                                                                   <------MYB46(1)                                                                   <------MYB83                                                                 <---------WOX13(1)                   <-----------GT1                             --------->ATHB12         --------->AHL20(2)                                   <---------YAB1     <---------AHL20(2)                                    --------->ICU4 >GT1--------->AHL20(2)            xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---->DOF2<---------AHL20(2)----------->RAV1(1)   --------->MYB52(1)                          <------   agtctaatttataaaatgatataacatttgcaacaaaaaaaaaaaaaaaaaaaaacgggtcattttgattggtttattcgaaaatcaagttatgttctta  17131500                                               --------->TOE1(2)                        <---------ANAC55(2)                                         <-------TEIL                                   <---------ANAC58                                     <---------TOE1(3)                                  <---------ANAC58                                     <---------------AtSPL8                       <---------YAB1                                     --------------->AtSPL3                  <------MYB83                  --------->bZIP60(1)<---------TOE2(3)                       <------MYB46(1)                  <---------bZIP60(1)--------------->AtSPL8               <---------ANAC58      <---------CCA1(2)             <---------DOF5.7(2)                   <---------ANAC58         --   ------>ZmHOX2a(1)              --------->DOF5.7(2)                     <---------ANAC46        <-- ---YAB1  --------->TOE2(3)    <---------TOE2(3)              ----------->GT1----------->GT1---------   atgtcctcataacttcaatgacatcaaatttttgatgttaacgtacaaacattcgataactagatggtaatgtatggcttggttataaatacttgtctta  17131600                                                                                        <---------ICU4                                                                                        --------->ATHB51                                                                              --------->ARR14(2)                                                                            <------MYB46(1)                                                                            <------MYB83<---------AHL20(2)                                                                           --------->MYB59           ---------->DOF2                                          --------->ANAC58    --------->AHL20(2)      ================================================================================MADS_MADS      <---------------AGL15           ---------->ID1                =================================     ----------------->AGL2          <-----------GT1                --------->ANAC58   --------->ICU4 ------->YAB1           <---------ANAC46      <-----------GT1  --------->ANAC46   ------>ZmHOX2a(1) -------ATHB12         <---------TOE2(3) <----------DOF2------->MYC3<-----------------AGL3  <<<<<<<<< ->ID1--------------->AGL15     <---------MYB46(3)      <-------MYC3<-----------------AGL1<---------YAB1   atcataaaccagaaaaagaaacaatgaggtatagtggtttctcctttttatcttcacacatgtctccgaaacccaatttggttcctctaattatttttct  17131700                                                            --------->ANAC46                                                          <---------ALFIN1                                                         ------>MYB46(1)                                                       --------->DEAR3(1)                                                       <---------ALFIN1                                                       --------->AtMYB61                                   >>>>>>>>>MYB98      <---------MYB111(1)    <---------AHL20(2)               ------>MYB83      ------>ZmHOX2a(1)     <---------MYB111(2)  ----------->TBP   --------->ARR14(2)           <---------MYB59       <---------ZAT2      --------->AHL20(2)   <---------GLK1(2)   >>>>>>>>>>MYB80                --------->ZAT2--------->ARR11(3)  --------->HSFB2a(1)XXXXXXXXXXXXXXXXXXXX>MIR844*   <---------ALFIN1<---------ARR11(3)            <-- ===============================================MADS_MADS------>MYB83  <----------DOF2     <--------- <GT-3b        ------>MYB46(1)  <---------------AGL15------>NtERF2 <---------CCA1(2) <----------DOF2   tcaaagattcccaaaccaaatgacaaaccatcttcctaacttagtactagacccccacctcccctccatatatcttttatatatatgctttctctttata  17131800                                                                                -------->P                                                                               <-----------GT1                  --------->YAB1                                            <------ZmHOX2a(2)             ------------>CBF                         --------->ANAC58     <-----------ARR10            --------->ANAC46     --------->DAG2       --------->ANAC58  ------>ZmHOX2a(2)     --------->ANAC46   *TSS   ---------->DOF2        ----------->GT1  <------ZmHOX2a(2) -----TEIL  --------->ANAC58--------->ANAC58 <----------ID1           <---------ARR14(2) -DOF2      --------->ANAC58--------->ANAC58 ----------->GT1          --------->ARR14(2)   ttcatccacaaaacacacaataagaacaacaagaaaaggtgagtagaaggaaaaacaagtaaaaactatgccgatccgatctaaccccttcttcaatatg  17131900                                                                                         <---------ANAC58                                                                                        --------->ALFIN1                                                                                        <------NtERF2                                                                                      <---------ANAC46                                                                                    --------->MYB55(2)                                                                                <---------DEAR3(1)                                                                            --------->HSFC1(2)                                                                            <---------HSFB2a(1)                                                                            --------->HSFB2a(1)                                                                            <---------HSFC1(2)                                                                           --------->ANAC58                                                                           --------->ANAC58                              <---------LBD16                          <---------HSFC1(1)<---------ANAC46                             <---------ALFIN1                          --------->HSFB2a(2)                           <---------ALFIN1                            <---------HSFB2a(2)  ---------                          <------NtERF2                                --------->HSFC1(1)<---------ANAC58                         <---------RAP2.3(1)                     --------->ARR11(3) <---------MYB46(3)                         --------->LBD16                         <---------ARR11(3)--------->ALFIN1                        <---------RAP2.3(2)                     --------->GLK1(1)  <---------AtMYB61      ------>NtERF2    <---------LBD16                          <---------GLK1(1)  <---------DEAR3(1) <---------ZAT2    <----------DOF2  --------->SPL7  ---------->DOF2   <---------LBD16 --------->ALFIN1   gatagctcggccttgctctcgctcttgcggcacacgggtacctccatggactctaaaagctcgaagaaatcttctggaagcatcggtggtggggtgctta  17132000                                                                                              -------                                                                                           ----------                                                                                        --------->ANAC46                                                                                        <---------ANAC55(2)                                                                                        --------->ANAC58                                                                          <---------MYB52(1) --------                                                     <---------ANAC46 --------->ARR11(3)--------->ANAC55(2)                               <--------P  <---------ZAT18            <---------ARR11(3)--------->ANAC58 -->GT1                 --------->YAB1  ----------->GT1         <------NtERF2   ---------->DOF2  ----   aaatgttcaagctcataccaatgctatcatctggttgcaagatggtgaacttgttgagtcgagggcatcgaagacccttacttaaagactacgcaacaac  17132100                                                            <---------ANAC58                                                            <---------ANAC58                                                       <---------ICU4                                                       --------->ATHB12                                                      <---------YAB1                                                      ------>ZmHOX2a(1)                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)        <---------LBD16                           --------->ARR14(2)             --------->ZAT2    <-      --------->ARR14(2)                          --------->ARR14(3)             <---------At4g35610      <---------ARR14(2)                          --------->ARR11(3)             <---------ZAT2   <-- -->MYB52(1)                                      <---------ARR14(3)             --------->At4g35610 ->RAV1(1)         ---------->DOF2<---------ANAC58<---------GLK1(2)       <---------YAB1  --------->At4g35610 ->MYB46(3)  --------->ARR14(2)   <---------ANAC58<---------ARR14(2)    --------->YAB1    <---------At4g35610 --->GAMYB   <---------ARR14(2)<----------DOF2  ----------->ARR10     <-----------GT1 --------->LBD16   gggaacaatattcgggtttcgcaaaggaagagtctttcttgctatacaagaagatcctcattgcctgccaattttcatcatcgagctcccgatgctgact  17132200                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                <----                                                                                              <------                                                                                           <---------                                                                                           --------->ALFIN1        ---------->DOF2                                                                  --------->ANAC55(2)   <------NtERF2                                                                         <---------ANAC58  --------->At4g35610                    <----------DOF2                                 <---------ANAC46  <---------ATERF1(1)                   <---------ANAC58                                 <---------ANAC55(1)  ------>NtERF2                    <------ZmHOX2a(1)                                     <---------ANAC55(2)  <---------At4g35610          <---------MYB52(1)                   <------ZmHOX2a(1)    <---------ANAC58 <---------DEAR3(1)      <---------ARR14(2)   ---------->DOF2--------->O2           <------ZmHOX2a(1) --------RAP2.3(1)   <---------LBD16    <---------ANAC58     <---------O2           <---------------AtSPL3 -------DEAR3(1)     <------NtERF2<---------YAB1        ---------->DOF2     --------->ALFIN1 --------   tcggcgctgcaaaaggagatggcctcggaaactgttaggattgctttggaaagcgagacaaagacgtcgaggaagaaggtgttggaggagtacgtgtggg  17132300  Previous    Next  AGI:  At5g42680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61286.1); contains InterPro domain Protein of unknown function DUF617, plant (InterPro:IPR006460) Range:  from: 17131824    to: 17132645    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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