Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ------>ZmHOX2a(2)     <------ZmHOX2a(2)                                                     --------->ANAC46        --    --------->ARR14(2)                                                     --------->ANAC58     <----    <---------ARR14(2)                                       <---------ARR14(2)                <-----   <------ZmHOX2a(1)                                         --------->GLK1(2)            --------->ARR14(2) <---------TOE1(2)      --------->TOE2(3)        <----------DOF2           --------->ANAC58    ------ --DOF2   <---------ATHB12                <------ZmHOX2a(1)  --------->ARR14(2)           <---------ARR14(2)   tagtaggatccaatcgattcaaatttccttcatttttcttactaggactctctttcccattcaaatctggtttcttcaagtcactagatttgaatccgat  17122800                           ------->GAMYB                          --------->MYB46(3)                         ---------->DOF2                        ----------->RAV1(1)                        ------>MYB83                        ------>MYB46(1)                        --------->MYB52(1)                      --------->MYB46(3)                      ------->GAMYB                     --------->ANAC58                                                           -----                     --------->ANAC58                                                    <---------ZAT2                    --------->ANAC58                                  --------->TOE2(3)  <---------At4g35610                    -------->P                                    --------->DAG2      <------ZmHOX2a(1) ---->ZmHOX2a(1)    --------->ANAC58                             ---------->DOF2  <---------bZIP60(2) --ZmHOX2a(2)   --------->ANAC58                        <---------ARR11(3)        <---------ANAC46 ----ARR14(2)   --------->ANAC58                       <---------CCA1(2)       ----------->TGA1 <---- --->ARR14(2)   --------->ANAC46  ----------->GT1      <---------GLK1(2)       ----------->HVH21<----   cctcgttgattcaaatacaagcaacccaacagcgagaagaaaaactaagacgacccagtatctcacaaaaagccttagaacatgacgaggaagctcgtag  17122900                                                                            <---------GLK1(2)                                                                            <---------ARR14(2)                                       --------->ZAT2                       --------->ARR11(3)                                   --------->SPL7                          <---------At4g35610                                 <---------SPL7               ----------->ARR10                               <---------MYB46(3)           <---------MYB52(1)                            <-----------HVH21              --------->TOE2(3)--------->ARR14(2)                           <---------ANAC58    ------>ZmHOX2a(2)       <-----------HVH21      ----------->HVH21    <---------ANAC58  <---------ARR14(2)       --------->ETT(2)              < ---->ZAT2              <----------DOF2<---------ZAT2    <---------ATHB12 ----------->ARR10      <--- -----ZAT2    <----------DOF2 <---------ANAC46<------ZmHOX2a(2)   <-------TEIL                <------ -----At4g35610       <---------At4g35610    --------->ARR14(2) <---------GLK1(2)    <------ZmHOX2a(2)   ctggttctgtgactcactttcttccgctttcgtcgggtacgagctcggatccgattcaaatcgttagattcgtcgtcagatactgagatcgagacactgt  17123000                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                       ------>ZmHOX2a(2)        ---------->DOF2               -------                                      <---------YAB1          --------->ANAC58                <------                                     <---------ARR11(3)--------->HSFB2a(2)                    <------                                     --------->ARR11(3)<---------HSFC1(1)       <---------ANAC46----- ---------MYB46(3)               <------ZmHOX2a(1)     --------->HSFC1(1)  <---------ANAC58  <------- ------MYB46(3)                <---------TOE2(3)       <---------HSFB2a(2) <---------ANAC58 --------- -----RAV1(1)  <---------AtMYB61 =============HOX2a_HOX2a     --------->ANAC58 ---------->ID1--------   tgttgttgaacattgttgtggtttcgaattgtttaggatgatctttggaattggtttctcgaaaacgaaagagttgagcttgtcgtagtagagagagatc  17123100 -ZmHOX2a(2) -->AGP1 -->ARR14(2) ---ARR11(3) -->ARR11(3) -->ARR14(3) ---ARR14(3) ---ARR14(2)                                                                           --------->AHL20(2) ->ZmHOX2a(2)                                      <-----------GT1                     <---------AHL20(2) --GLK1(1)       --------->ATHB12         ------->TEIL                              --------->ARR11(3) -->ARR10        --------->YAB1        --------->MYB46(3)                           <---------ARR11(3) ->GLK1(1)      <---------ATHB12       <---------MYB52(2)<----------DOF2<------ZmHOX2a(1)     *TSS   ttcttcccttagaatcgaatcatcggtgtttatcaaattgaacgaacccgattaaaccggtttatgtctcaataggatgttttagagattttattttgtt  17123200                                              <------MYB46(1)                        ------------>CBF                                              <------MYB83                        --------->YAB1   --                                         --------->ATHB12                <---------ICU4         <----                                 --------->AHL20(2)                     <---------YAB1   <---------ATHB12                                 <---------AHL20(2)                   --------->YAB1--------->ANAC58               <-----------GT1  <-----------TBP <---------CCA1(2)    --------->ICU4 --------->ANAC58          ----------->GT1   ------------>CBF --------->MYB59  <---------YAB1     <---------ATHB12 <-- --------->AHL20(2)  <----------DOF2<---------YAB1     <---------YAB1<---------YAB1 --------->AtLEC2-   tcattatatatgatgttatacaactttctatgcaatttataaatgatttggtatcttatgacttatgagttatgattatttctatcatgcaatcttgcat  17123300                                                     -------->HAHB4                                  <---------RVE1(1)  <---------ICU4                                  <---------CCA1(1)  --------->ATHB51                                 <---------AHL20(1)  <--------ATHB1                                 --------->ARR11(3) <---------ATHB51                                 <---------ARR11(3) <---------AHL20(2)                                 --------->AHL20(1) --------->AHL20(2)                             ---------->DOF2     --------->AHL20(2)                               ---   --------->MYB52(2)       <---------AHL20(2)  <---------AHL20(2)                               <--- ------->ATHB12       <---------ANAC55(2)       --------->AHL20(2)                              ----- -----CCA1(2)  <---------------AGL15      <---------TOE2(3)              <----------DOF2        <---- -------YAB1   --------------->AGL15      <---------TOE1(3)         <---------MYB52(1)      <-------- -------->TOE2(3)     --------->ANAC55(2)<-----------GT1      <---------AHL20(2)            ---------   atcattagttgagtttgctaaatcaagtattaaaagatatttttaacgaaataaataattgtcttaaattgttagcttttaagtaaaacatcatataatt  17123400     --------------->AtSPL3        <---------AHL20(2)     <---------------AtSPL8    --------------->AGL15                            <---------AHL20(2) ------>AHL20(2)               <---------------AGL15                       <---------AHL20(2) ------AHL20(2)            <---------YAB1                                 --------->YAB1 ---->AHL20(2)           --------->YAB1           <----------DOF2        <---------YAB1        ------ -----AHL20(2)        ----------->GT1     ----------->GT1          <---------AHL20(2)    <---------WOX13(1) -AHL20(2)         --------->MYB52(1) <---------TOE2(3) <-----------GT1--------->YAB1--------->TOE2(3) >AHL20(2)   ---------->DOF2<-----------GT1    <-----------GT1     --------->AHL20(2)--------->TOE1(3)   taaaatagaggtactaaaagttaactgttataactattttaagtttgttaaactttataaacgtcttaaatatttataatattaaaacctgaatgacatt  17123500                                                                      <---------TOE2(3)                                                                     ---------->DOF2                                                               --------->AHL20(1)                                                           <---------AHL20(2)                <-------                                                       <---------AHL20(2)                    --------                   <----------DOF2                 <---------YAB1   <---------AHL20(2)<-----------GT1                   <---------DAG2              --------->TOE2(3)--------->AHL20(2)    <---------AHL20(2)                <-----------GT1               <---------ICU4   <---------AHL20(2)  <---------ICU4      <---------AHL20(2)                      --------->YAB1--------->AHL20(2)    --------->ICU4  ---      --------->AHL20(2)                    <-----------GT1--------->AHL20(2)   --------->YAB1  -----  --------->AHL20(2)    --------->YAB1----------->GT1  --------->AHL20(2)    --------->YAB1 --------- --->AtLEC2----------->GT1        --------->YAB1<---------YAB1 <---------AHL20(1)<---------AHL20(1) -   caaataatataaatagtttaactttataagaatttataagaagtttaaacattataaatatttaaaatatttaaagtattcataatatttacattctata  17123600             --------->AHL20(2)                         <---------DAG2          <---------ICU4                       <---------AHL20(2)         <---------YAB1                   <---------AHL20(1)         --------->ICU4                   <---------AHL20(2)                                        -       --------->YAB1                     --------->AHL20(1)                                       xx      <---------YAB1                      --------->AHL20(2)                               <xxxxxxxxx --------AGL15       <-----------GT1     <---------AHL20(2)                              <---------WRKY38(1) ------->AGL15     <---------AHL20(2)    --------->AHL20(2)                             --------->WRKY18(1) ------->DOF2--------->YAB1        --------->AHL20(2)   <----------DOF2                <-----------HVH21 ---->YAB1--------->YAB1           --------->YAB1 <---------YAB1                      ----------->GT1 -------->AGL3     --------->AHL20(2)  --------->YAB1------->TEIL       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ---------->GT1--------->ICU4--------->YAB1   --------->AHL20(2)    <----------DOF2-------->P     ---   aaaagtttataataataatatttaaactctataacaattaaaaataaattttatgaaacttttttggttcctttgtgaaaaatgcaaccggtcaaaacag  17123700  Previous    Next  AGI:  At5g42660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G02910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61237.1); contains InterPro domain Protein of unknown function DUF616 (InterPro:IPR006852) Range:  from: 17120152    to: 17123194    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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