Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ATHB12                                                                         <---------YAB1                                                                       <---------ICU4                                                                       --------->YAB1                                                                      --------->ICU4                              --------->ARR14(2)                    --------->YAB1                             <---------GLK1(2)     --------->YAB1   <---------ICU4          ------->GAMYB                    ------->MYC3             <-----------GT1   <---------ARR11(3)           ---------                    <-------MYC3    <---------bZIP60(1)        --------->ARR11(3)          --------->MYB46(3)            <---------ARR11(3)--------->GLK1(2)  <-----------HVH21 <-------TEIL      <---------ARR14(2)          <-------TEIL--------->ZAT18      --------->AHL20(2)  --------->AHL20(1)    --------->ARR14(2)      --------->ANAC46<-------TEIL  --------->bZIP60(1)        <---------AHL20(1)  --------->LBD16 --------GT1--------->ARR11(3)<---------ARR14(2)------->GAMYB --------->YAB1     <---------LBD16   tacactctaaggcacatcttcatgtgcattagaatctgatgtcaatttaactgtcatagtccaaaaatattcattatgatttgtccggattcaaccatcg  17083100                                                      >>>>>>>>>RAP2.2                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                                   <---------CCA1(2)            <---------ARR14(2)                     <---------GLK1(1)     ------>MYB83            --------->YAB1        --------->GLK1(1)     ------>MYB46(1)        <---------ATHB12      <---------ARR14(2)                                <   <---------MYB59        --------->WOX13(1)      --------->ARR14(2)                            -----   <---------MYB46(2)   <---------ATHB12       <---------ANAC46                                 ----- >AtMYB61   --------->ARR14(2)                <---------LBD16      --------->ARR11(3)   --------->ANAC46   cattaccaaactcatatacgattcaaatcaatcaaaaatttcaaaaatttcggatatctaaacgtataagatttagtctgtttttaatccacaaaaccaa  17083200                                                                                =====================HOX2a_HOX2a                                                                                <------ZmHOX2a(1)                                                                                --------->YAB1                                                                              <---------TOE2(3)         ----------->GT1                                                    --------->CCA1(2)   -----        --------->DAG2                                                   <---------TOE2(3)    <------ZmHOX2a(2)      ---------->DOF2  <-----------GT1                                   <---------YAB1   --------->ALFIN1 --------------->AGL15<<<<<<<<<MYB98                                 --------->TOE2(3)  <---------bZIP60(2) ----------ID1     <---------TOE2(3)                               <---------ARR11(3)   <---------ANAC46 ->MYB46(1)   <---------YAB1       ----------->GT1                 --------->ARR11(3)<---------YAB1 ->MYB83<---------TOE2(3)     --------->AHL20(2)               <---------AHL20(2)  --------->YAB1   ataccacaaaaaggttatatttatgttactacttaaatagtttaatatagaaacttgaaacagatttaaaatcttaagataaggatgatgatgtggatca  17083300                                                                                <---------ARR14(2)                                                                                --------->GLK1(2)                                                                                --------->ARR14(2)                                                                               ------>MYB46(1)              ----------->RAV1(1)                                              ------>MYB83        --------->HSFB2a(1)                                                  <---------MYB59        <---------HSFB2a(1)                                                 ----------------->AG       ---------->TaMYB80                               ----------->GT1     ----------------->AGL1       <---------KAN4(2)                            <---------MYB52(2)    <-----------GT1--------->TOE2(3)   <---------At4g35610                              --------->MYB46(3) <---------AHL20(2)------->GAMYB ----->DOF2   --------->MYB52(1)   --------->YAB1 ----------->RAV1(1) --------->AHL20(2)--------->MYB46(3)   aagacagcgaatgtcccaacagttttcttctattcaaaaatcatttagactgcaacaaatgtaaaatgtgtatttaataccaaatctgtaaccacaaaaa  17083400                                                                                                    -                                                                                                   --                                                                                                   --                                                                                            ------>MYB83                                                                                            ------>MYB46(1)                                                                                            -------->P                                                                                          <---------MYB111(2)                                                                                          --------->MYB46(3)                                                                                          <---------MYB111(1)                                                                                          --------->AtMYB61                                                                                          <---------ALFIN1                                                                                          <---------MYB55(2)                                                                                      --------->MYB46(3)                                                                                      <---------MYB55(2)                                                                                     ------>MYB83 ---                                                                                     -------->P   ---                                                                        <-----------GT1--------->AtMYB61                                       <---------GLK1(2)              --------->YAB1 ------>MYB46(1)-                                ------>MYB83                      --------->ICU4     --------->SPL7--                             --------->ANAC58                ----------->GT1   <-----------GT1    ---                             --------->ANAC58    --------->AHL20(2)   --------->AHL20(2)--------->ANAC46                  --------->YAB1------>MYB46(1)<----------DOF2   ------------>CBF--------->ANAC46----   tttcaaattagattatacaaacaaaattgacaccaaatattgattctcactttaaatgtattacagtaacaattatacattataccctaccaccaactcc  17083500 -------->MYB46(3) ------->ANAC58 ------->ANAC46                         <---------ANAC55(2) --->MYB46(1)                           --------->ANAC55(2)                                   <------ ----->P                            <-----------HVH21                                         ------- ----------->CBF                   <---------ZAT6                          ------------------------>ANAC81 ------->ANAC58                <---------MYB52(1)                     ----------->GT1         <------ --->MYB83  ---------->ID1    ------>ZmHOX2a(1)              ---------->DOF2xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -->ZmHOX2a(1)                <----------DOF2  *TSS  ---------->DOF2 ----------->GT1      ---------->DOF2   tacccaatccatttgtctctctctctctcatcctttagtgtcacttgtttttgtacaaagagagaaagagattggaaaaaaaaaaaaaaaaaaaaagatt  17083600              <---------ANAC46        <---------AtMYB61        <---------TOE2(3)        <---------TOE1(3)    <-------GAMYB --------->GLK1(1)                        --------->TOE1(3)   --------->MYB52(2)        ----------->RAV1(2)  --------->TOE1(3)   <---------MYB46(3)     <------ZmHOX2a(2)       --------->TOE2(3)     <-----------GT1 ---ARR11(3) <---------At4g35610             --------->YAB1--------->TOE2(3)------>ZmHOX2a(1) -->ARR11(3) --------->At4g35610          --------->WOX13(1)          <---------YAB1 ---GLK1(2)<--------P    <---------ARR11(3)<-----------HVH21       <---------YAB1              ------   tttgtttgttgaggttgctgaaatctagatcacctgttttgaatcagtcatacctcaaaaaccctaactcttattatcctctcccaattgaatttttcaa  17083700                                               <---------AHL20(2)                                               --------->AHL20(2)                                    ----------->RAV1(2)                                    <---------At4g35610                                  <---------ANAC58                                  <---------ANAC58        --------->ARR11(3)                                  <---------ANAC46        --------->GLK1(2)                      ----                                <-----------HVH21         <---------ARR11(3)                     <---                       <---------ICU4     ------>ZmHOX2a(2)                          --------->ANAC58          --------------->AGL15<-----------RAV1(1)       <---------GLK1(2)           --------->ANAC58 ---->DOF2<---------------AGL15=================RAV   --------->YAB1           <---------ANAC46  ----   agcttgaagaaactagtagtagtaatcttcgctctgtcgtctgatccatttttttatcaaaatctcgagctaaaaactcttgtgtttaagcaaatgaaat  17083800                                                                        <-----------RAV1(1)                                                                      <---------ANAC46                                                                      <---------ANAC58 ----->ZAT18                                                          <---------ANAC58 ------ZAT14      --------->CCA1(2)                                 --------->ZAT18 <----------DOF2 ----->ZAT14   <---------TOE2(3) <---------At4g35610      <---------TOE2(3)<---------REM1(1)    -----   gcactgtgtttgattttgagatttgatggaagtgaagctgtttcttcgaagaatttcatggaggttttagttccctgttgtaggctctttgttagtaatc  17083900                                                                              <----------DOF2                                                                              ------>ZmHOX2a(1)                                                                             --------->TOE2(3)                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                         <---------GLK1(1)         <-              ------>ZmHOX2a(1)                               <---------TOE2(3)     <---------AHL20(2)              --------->LBD16                                 <---------TOE1(3)<---------MYB52(1) <--   <-------TEIL           ---------->ID1                  <----------DOF2--------->GLK1(1)        <-- <---------GLK1(2)<--------P                         <-----------GT1   <---------ANAC58           <-- ---->TOE2(3)<---------LBD16  <----------DOF2      <---------AHL20(2)  <---------ANAC58      <-------   ttagattcgtcatttcctgggtaagtttgtttctttcttctgtagctattgattttatcgatttagggtttttgggtatcctttatttttttgaaatgtt  17084000  Previous    Next  AGI:  At5g42620.1    Description:  metalloendopeptidase/ zinc ion binding. similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ67154.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61218.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70297.1); contains InterPro domain EGF, extracellular (InterPro:IPR013111); contains InterPro domain EGF (InterPro:IPR006210); contains InterPro domain EGF-like region, conserved site (InterPro:IPR013032); contains InterPro domain EGF-like, type 3 (InterPro:IPR000742); contains InterPro domain Peptidase M8, leishmanolysin; (InterPro:IPR001577) Range:  from: 17083547    to: 17088569    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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