Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ANAC55(2)       --------->TOE2(3)                          --------->ANAC55(2)    ----------->RAV1(1)     ----------->RAV1(1)                          <---------ANAC46 <---------MYB52(1)            --------->MYB52(1) ------>YAB1             <---------LBD16 --------->YAB1    --------->TOE1(2)                  <------ ---AHL20(2)            --------->MYB52(1) --------->DOF5.7(2)   --------->At4g35610      ---------->DOF2   tcaaaagtttggaagaaatatttgagttacggatgttgttgaatcgttatccaacataaaacctagtagatgaaacaacagtatgcaagactcaaaggaa  17079300                       ---------->DOF2                   <---------ANAC55(2)                 <---------AHL20(2)                 --------->AHL20(2)              --------->YAB1                                                       --------->YAB1             <---------AHL20(2)                                       --------->AHL20(2)    >>>>>>>>>TBF1             <---------YAB1          --------->YAB1      <---------WOX13(1)     --------->YAB1  -----           --------->YAB1       <---------YAB1         --------->ATHB12        <---------ATHB51>>>>>> ----ID1  <---------YAB1      <-----------GT1   <---------GLK1(1)    --------->AHL20(2)  >>>>>>>>>TBF1   caaaacagtgtttttataattaagtaaaagttttactattcatcaattgggactccctgattgttttccaaataaaaaacaataataagaagaagaagaa  17079400                                                             <-------MYC2                                                             ------->MYC3                                       --------->ARR14(2)    ------->MYC4                                       <---------ARR11(3)    <-------MYC4                                       <---------ARR14(2)    <-------MYC3                                       <-----------ARR10     ------->MYC2                                       --------->GLK1(2)    <---------TGA1a         <----------DOF2               --------->ARR11(3)   --------->TGA1a        <---------ANAC58              <---------GLK1(2)     <--------ABF1      <-----------GT1              <------ZmHOX2a(1)        =========================================   <---------ICU4           --------->YAB1                  --------->O2  <---------AHL20(2)        --------->AHL20(2)              <---------O2  --------->AHL20(1)       <---------ATHB51                 --------->ANAC55(2)  --------->AHL20(2)       <---------ATHB12                 <---------ANAC55(2)       <---------WOX13(1) --------->AHL20(2)     --------------->AGL15           <-----------HVH21           --------->ATHB12 ------>GT1            ----------------->AGL3          ----------->HVH21           <---------YAB1 >>>TBF1<---------ANAC58<---------------AGL15    <---------ZAT6              <---------YAB1       ---   gaaaaaaattactttccacatcgattccaattatagaggagaatctttgtagtgaaactgacacgtgttctccaatattcttatactcattgactcttac  17079500                                                                       --------->ATHB51                                                                       -------->ATHB1                                                                       --------->YAB1                                                                       <--------HAHB4                                                                       -------->HAHB4                                                                       <---------ICU4                                                                      <---------ATHB51                     --------->GLK1(2)                                <---------ATHB12           --------->ARR14(1)                                         --------->ICU4           --------->GLK1(2)                                          <---------YAB1          --------->ARR14(2)              <---------YAB1           <---------YAB1                  --          <---------GLK1(2)            --------->GLK1(2)    --------->AHL20(2)                    <--          <---------ARR14(2)          --------->ARR11(3)    <---------AHL20(2)                 <-----          --------->ARR11(3)          <---------ARR14(2)    <---------YAB1<-----------GT1      ------        ----------->ARR10             <---------GLK1(2)    --------->AHL20(1)               ---------        <---------TOE2(3)             <---------ARR11(3)   --------->AHL20(2) --------->At5g28300<--- ========bZIP_DOF   <---------GLK1(2) --------->ARR14(2)   <---------AHL20(1)----------->GT1<-------- ------->DOF2     <---------TOE2(3) ----------->ARR10     --------->YAB1 <---------YAB1--------->AHL20(2)   caaagtaactaagattctctaagattcttcatttcacaaagattctcatttttctcccaaatataatttctaattattacagtaaaaaatcaaataaaat  17079600        <-----------GT1     --------->TOE1(3)     --------->TOE2(3) ------->LBD16                      ------>MYB46(1) -------HSFB2a(2)                   ------>MYB83 ----ARR14(2)                     <---------MYB59 --->ARR14(2)          <-----------GT1                   ------->GAMYB                    ---------->DOF2 >AHL20(2) <----------DOF2        <---------MYB46(2)    <------------MYB.PH3(1)     --------->ANAC46 ------LBD16        <----------DOF2 --------->MYB52(1)<-----------GT1             --------->ANAC46 -AHL20(2) <---------DAG2      <-----------GT1     ----------->TBP          <---------AHL20(2)   ccggaaacattaacttttcttccttttacattttaacctaactaatcgggactatataactgtcttcttgccaaatatttcattacacaactcaaagaac  17079700                                                                                ------>ZmHOX2a(2)                                                                               --------->ARR14(1)                                                                               --------->CCA1(2)                          --------------->AGL15                                <------ZmHOX2a(2)                          <----------DOF2                                     --------->AGP1                         <-----------------AGL3                               <---------ARR14(2)                    <----------DOF2                                    <-------GAMYB                  <---------YAB1                                   <---------WRKY18(1)                 --------->ARR11(3)               <---------ATHB12--------->WRKY38(1)                 <---------ARR11(3)             --------->WOX13(1)--------->WRKY12            -------              <---------GLK1(2)         --------->ANAC46         <---------WOX13(1)      --------->ZAT6        *TSS  <---------ARR11(3)       <---------REM1(2)  --------->ANAC46    --------->ARR14(2)   aaagactcatactcaagattatctttctcttttaatggctctacgcagagcaatcactaaacgtctcattgactgttacagatccgatgtaacacaacaa  17079800                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                                                                         <-----------ARR10                                                                         <---------ARR11(1)                                                                         --------->GLK1(2)       <---                                                                         ------->TEIL  <---------ARR14(2)                                                                        <---------CCA1(2)       <----                                           <-----------HVH21            <---------GLK1(2)   ---------                                           --------->TOE2(3)            <---------ARR14(1)  <--------                                           <-----------TGA1    ------>MYB83            <---------GLK1(2)                                    --------->ARR14(2)         --------->MYB52(1)      --------->ARR14(2)                                    --------->ARR11(3)         ------>MYB46(1)    --------->MYB52(1)-                                    <---------ARR11(3)      --------->ANAC55(2)--------->ANAC55(2)<--                                    <---------ARR14(2)      --------->ANAC46   <---------ANAC55(2)---                     --------->ANAC58 <-------TEIL     <---------bZIP60(1)    <---------LBD16 <------NtERF2 -->MYB46(3)         --------->ANAC58<------ZmHOX2a(2) --------->bZIP60(1)   --------->MYB52(1) -----   cactcatttttcagacaactctcaccctataacatgaagatccatcgtcagtacatgacttcacctaatggtccgaatcttacggaccggattgtcggga  17079900                            <------NtERF2                          <---------ANAC46                          <---------ANAC58                          --------->ALFIN1                          <---------ANAC58                      ------>NtERF2                     --------->DEAR3(1)      <---------ANAC46                    <----------CDC5       ----------->HVH21 ---ZmHOX2a(2)     --------->LBD16       <-----------HVH21 -----ARR14(2)     ------>NtERF2        --------->LBD16 >ETT(1)     --------->ARR14(2)  <---------ARR14(2) -LBD16     <---------MYB52(1)   --------->ARR14(2) -------->LBD16   --------->DEAR3(1) --------->MYB52(1) -------LBD16<-----------ARR10 ----------->GT1 --->ZmHOX2a(2)   --------->ANAC46  <---------ALFIN1                            <---------TOE2(3)  -- ---->ARR14(2)   <---------LBD16<------ZmHOX2a(1)        <---------MYB52(1)<---------MYB46(3)     ---   tccgcatcgagtccgtttctccgccgaggcgggaggaaacaccggtgatgggtttatcagttagtgagactaagaagttgttgaggctatatcaaatgga  17080000                                                                <-----------RAV1(1)                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             --------->AGP1                                                             <---------ARR14(2)                                                             --------->ARR14(2)                                                             <---------ARR11(3)                                                             --------->ARR11(3)                <-----                                                             <---------AGP1                   -------                                                      <---------AHL20(2)                      <------                             ---------->DOF2         --------->AHL20(1)              --------->YAB1                           ------>ZmHOX2a(1)         <---------AHL20(1)              --------->ATHB12    ---------->DOF2       --------->TOE2(3)          --------->AHL20(2)             --------->ICU4 ------->DAG2          --------->GLK1(2)             <---------AHL20(2)     --------->ALFIN1  ------- ------->DOF2         <---------GLK1(2)   <---------YAB1    <---------CCA1(2) <---------ANAC46<------   gaaagtgaaagagagactcagagagattcctaaaagctctgtttcttattgggaatttattcagatctgttgtgagagttgtgggaatgatgagcaaggt  17080100                                   --------->bZIP60(1)                                   <---------ANAC46                                   <---------bZIP60(1)                                --------->ALFIN1                          <---------HSFB2a(2)                         <---------LBD16 ----GLK1(2)          --------->KAN4(2)                                   --------->At4g35610 -->HSFB2a(1)        <---------HSFB2a(1)                                  ----------->GT1 ---HSFB2a(1)        --------->KAN4(1)        <------ZmHOX2a(1)         <-----------RAV1(2) -->HSFC1(2)        <------ZmHOX2a(2)<------NtERF2        <-----------GT1 <---------At4g35610 ---HSFC1(2)        =================================HOX2a_HOX2a      <-----------HVH21   tctcaaatggctaagtctttggatcattcgggatgtgtcgtcgttttaggagacatagtttttcttcatccccatcaggtgaattagcaaacacttgtgt  17080200  Previous    Next  AGI:  At5g42610.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61497.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61217.1); contains InterPro domain Protein of unknown function DUF607 (InterPro:IPR006769) Range:  from: 17079708    to: 17081275    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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