Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------ZAT14                                                 <---------ZAT18                                                 --------->ZAT18                                                 --------->ZAT14                                         <---------ALFIN1            --------->ATHB12            --------->MYB46(3)                 --------->ATHB12--------->YAB1          ----------->RAV1(1)           ------>ZmHOX2a(2)                <<<<<<<<<<<<<<<<<LFY          <<<<<<<<<<<<<<<<<LFY        ------->TEIL                       ------->TEIL--------->TOE2(3)          ------->TEIL   --------->DAG2<------ZmHOX2a(2)                 ----------->RAV1(1)        <---------ZAT18 --------->MYB52(1)  <---------DAG2             <---------ZAT18    <---------ATHB12 -------MYB52(1)--------->YAB1        <---------ARR14(2)     <---------MYB52(1)--------->YAB1<------- --------HVH21  ----------->GT1       --------->ARR14(2)    <-----------HVH21  ----------->GT1   gttagtccaatgcaccattggtaacataagggaacatatggatccaccttctgcacttaaaccgttagtccaatgcaccattggtaacataaatcatgtt  17070300                                                                                <---------GLK1(2)                                       --------->ARR14(2)                     <---------AHL20(1)                                       --------->GLK1(2)                      <---------ARR11(3)                                       <---------ARR14(2)             <---------WRKY18(1)                                   ----------------->AGL1  --------->ZAT14    --------->ARR11(3)                          <---------AGP1         --------->WRKY38(1) --------->WRKY38(1)              --------->YAB1    <--------P       --------->WRKY12<---------MYB52(1)   <----------DOF2     --------->YAB1       --------->ARR11(3) ------->TEIL  --------->ZAT18    --------->AHL20(1) ----RAV1(1) <---------YAB1 ------>ZmHOX2a(2)--------->SPL7<---------ZAT14   --------->YAB1   gcagacatcataactatcatactctattgatctggttgccgaatccgaacgttgaacgatgtgcaccggtattgaccaaaaatattctctttgatgggac  17070400                       <---------AHL20(2)                                   --------->YAB1               ----------->GT1                                             <---------YAB1              <---------TOE1(3)                                <-----------GT1     <---------TOE2(3)              <---------TOE2(3)       ----------->GT1          --------->YAB1 <---------YAB1   ------        <---------AHL20(2)  --------->YAB1                 <---------YAB1--------->YAB1       <------ --------->GLK1(2)     --------->AHL20(2)                ----------->GT1<---------YAB1        -------   gataatctatttagttatggtatattttattcatattttgttgtaaaatttttgaaaaattgttataacaacttattatcatgttaagaaaaacatttaa  17070500                          ------>ZmHOX2a(1)                   ==============HOX2a_HOX2a                   ------>ZmHOX2a(2)                  ===============HOX2a_HOX2a                  <------ZmHOX2a(2)                 --------->ARR14(2)                 <---------ARR14(2)              --------->ANAC46                            --------->At4g35610              <---------ANAC55(2)                         <---------At4g35610              --------->ANAC58                            ----------->RAV1(2)              --------->ANAC55(1)                      <---------ZAT18              --------->ANAC58                         --------->ZAT18 ---->DOF2 <---------ATHB12               --------->AHL20(2)      --------->TOE2(3) <---------AHL20(2) ---AHL20(2)  --------->ANAC55(2)         <---------AHL20(2)----------->HVH21      --------->YAB1 -->AHL20(2) <---------LBD16 <----------DOF2      <---------TOE1(1)  ----------->HVH21   agactaagaactaatcacggatcgattcctgcttaatcttcgattttattgtccgagggcacctgaaacctttgacaagtgcctataaaaatttgctaaa  17070600                                                                                                   --                                                                                                 <---                                                                                                 <---               --------->ATHB12                                                               <------               ----------->GT1                                           --------->ANAC58  --------->AHL20(2)               -------->HAHB4                                            --------->ANAC58  --------->ARR11(3)              <---------ATHB12                                           --------->ANAC46  <---------AHL20(2)              --------->ICU4                                             --------->AtLEC2  --------->AHL20(1)           <---------AHL20(2)                                      <---------MYB52(2)      <---------AHL20(1)          --------->AHL20(2)                                     ----------->RAV1(1)       <---------ARR11(3)        --------->TOE2(3)                                     --------->ANAC58        --------->AHL20(2)  --------->YAB1                                        --------->AHL20(2)------------>CBF--------->AHL20(2)  <---------ICU4                         <---------AHL20(2)   --------->ANAC58       <---------AHL20(2) <---------ATHB12                       --------->AHL20(2)    --------->ANAC46       --------->AHL20(2)   caaatcatcacattaaatgattaaaacaactctaaaaaacaattttatgttttgaaaatttaaaacgccacaaacatgcaatgccatttaaaatatatta  17070700                                                                                      --------->ANAC46                                                               --------->TOE2(3)      --------->ANAC58                                                               --------->TOE1(3)      --------->ANAC58                                                --------->ANAC58                      <---------ANAC55(2)                                                --------->ANAC58                      --------->ANAC55(1)           <---------AHL20(2)                   --------->ANAC46--------->DOF5.7(2)   --------->ANAC55(2)         ----------->TBP               <---------ARR14(2)     --------->ANAC58  <---------WOX13(1) ---------->DOF2                --------->MYB46(3)            --------->ANAC46 <---------ARR14(2) --------->HVH21                <---------MYB52(2)       <---------ARR14(2)<---------At4g35610 ------ANAC55(2)           ----------->GT1   *TSS    <-----------------------TaNAC69(2)      -------- ------ANAC46              --------->YAB1  ------>ZmHOX2a(1)  --------->ANAC58 --------->ARR14(2) ---AHL20(2)       <---------YAB1      --------->ARR14(2)--------->ARR14(2)--------->At4g35610   tgtgaaagcttatataaactgatgcttaatcgtaacaaacaaatcctcacacacaaacatatacacgttaaccagttagcagattgacacgaaatgtgga  17070800                                                                       <---------HSFB2a(2)                                                                       --------->HSFB2a(2)                                                                      ===============================                                                                      ------>ZmHOX2a(2)                                                                     --------->CCA1(2)                                                                     <------ZmHOX2a(2)                                                                    <---------ARR14(2)                                                                    --------->ARR11(3)                                                                    --------->AGP1                                                                    --------->ARR14(2)                                                            <------NtERF2                                                           --------->LBD16                                                          --------->HSFB2a(2)                                                          --------->ETT(1)                                                          <---------HSFB2a(2)                       -                           <---------ARR11(3)             <---------ATERF1(2)                     ---                    --------->ANAC58                      --------->ATERF1(2)               ------>NtERF2                    --------->ANAC58                     <---------LBD16                    <--------           <---------At4g35610               <---------MYB52(2)     <---------ARR11(3)     <---------DEAR3(1)           --------->ZAT2--------->ANAC58    --------->ANAC58     ----------->ARR10        <---------RAP2.3(3)           <---------ZAT2--------->ANAC58    --------->ANAC58--------->SPL7              ------->GAMYB ->ALFIN1  --------->At4g35610  <---------ALFIN1     <----------DOF2<---------AGP1    --------->MYB52(1)   gactgcgaattggagctgaggcaagacaagaccctcacttgttcaccacgaacaactttgccggaagacagatctgggagtttgatgccaacgggggctc  17070900                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                       --------->ANAC55(2)                      <----                                                       <---------ANAC55(2)                 <---------                                                       ==============================================                                                       <---------O2                    <------NtERF2                                                       --------->O2                   <---------SPL7                                                       --------->TGA1a               <---------ANAC46             ------>NtERF2                             <---------TGA1a               <---------ANAC58     <---------ARR14(2)     --------->ANAC58         <-----------GT1                 <---------ANAC58     <-----------ARR10      --------->ANAC58       <-----------HVH21            ----------->RAV1(2)    <------ZmHOX2a(1)    --------->ATERF1(1)      --------->ANAC58          ------>ZmHOX2a(2)  <----- ======HOX2a_HOX2a    <------ZmHOX2a(1)           --------->ANAC46         --------->GLK1(1)   <----- ----->ZmHOX2a(1)  <---------HSFB2a(2)            --------->ANAC58         <------ZmHOX2a(2) <------MYB46(1) -------->RAV1(2)--------->ALFIN1          --------->ANAC58               --------->ARR14(2) <------- -ATERF1(1) --------->DEAR3(1)             --------->ANAC58               <---------ARR14(2) <------MYB83   tcctgaggaactcgccgaggtcgaggaggctcgcctcaatttcgcaaacaacaagtcacgtttcaaggctagtcccgatctcttctggcgtaggcaggtt  17071000                                                                                               <----- ---MYB46(1)                                                                                  <------ ---MYB83                                                                                     ------- ---->MYB55(2)                                                                              --------- ---->MYB46(2)                                                                              <--------HAHB4 ---->MYB111(1)                                                                             <-------- -----AtMYB61                                                                              <---------YAB1 -----DEAR3(1)                                                                             --------->ICU4 ---->MYB111(2)                                                                      <---------AHL20(1) -----MYB46(3)                                                                       --------->AHL20(1) --RAV1(2)                                                                           --------->ARR11(3) ===MYC_MYB                                                          <---------TOE2(3)   --------->YAB1 ----MYB55(1)                             --------->YAB1     --------->ZAT14         <---------ARR11(3) ---P            <----------DOF2         <---------YAB1    --------->At4g35610      --------->AHL20(2) --ZAT2    <----------DOF2     <----------DOF2            ------->GAMYB        ----------------->AGL3   ggtgatgaaacctctttgcctttgaacaaaactctttttttttatgacaattctctataacagcacagtttaagtttttgttccaaatatatcatcatta  17071100                                                     --------->LBD16                                                    --------->LBD16                                                  ==========================HOX2a_HOX2a                                                  ------>ZmHOX2a(2)                                                 ===========================HOX2a_HOX2a                                                 <------ZmHOX2a(2)                                                --------->ARR14(2)                                                <---------ARR14(3)                                                <---------ARR11(3)     <----------DOF2                            --------->ARR11(3)  ---------->ID1                                --------->ARR14(3) ----ICU4                                       <---------ARR14(2)                                --- ---YAB1                         --------->DAG2--------->HSFB2a(1)                             ------ -->ICU4                        ---------->DOF2<---------HSFB2a(1)                             ------ >YAB1             --------->GLK1(2)   <---------HSFB2a(2)                                     ------ -ICU4            <---------GLK1(2)    --------->HSFB2a(2)           <------ZmHOX2a(1)--------->TOE2(2)   ttttgttcttttggtaaacagtttctgagggagaaaaagttcgagcagaagatcccgagagtgagaatagaggatgcagagaagataacatatgaagacg  17071200  Previous    Next  AGI:  At5g42600.1    Description:  MRN (MARNERAL SYNTHASE); catalytic. similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT1G78500.1); similar to BARS1 (BARUOL SYNTHASE 1), catalytic [Arabidopsis thaliana] (TAIR:AT4G15370.1); similar to ATPEN1 (Arabidopsis thaliana pentacyclic triterpene synthase 1), catalytic/ lyase [Arabidopsis thaliana] (TAIR:AT4G15340.1); similar to beta amyrin synthase [Bruguiera gymnorhiza] (GB:BAF80443.1); similar to beta-amyrin synthase [Betula platyphylla] (GB:BAB83088.1); similar to beta-Amyrin Synthase [Panax ginseng] (GB:BAA33722.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha tor Range:  from: 17070745    to: 17075473    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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