Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <------ZmHOX2a(2)                                                                  --------->LBD16                                                               ------>MYB46(1)                   <---------ICU4                              -------->P                   --------->ATHB51                           --------->MYB55(1)                   --------->ATHB12                     <---------ANAC58         <----------DOF2     --------->TOE2(3) --------->TOE2(3) ------->GAMYB         ------>ZmHOX2a(1)<---------CCA1(2)  <---------ARR11(3)------>MYB83                <---------CCA1(2)   ------->TEIL   <---------YAB1             --------->ARR11(3)--------->MYB52(1)   <---------GLK1(2) ---------YAB1    --------->ICU4   --------->YAB1       <---------ANAC58        ---------->DOF2     -   atatgaatgtcctttgtttcattattgtttatcttattcatgagcaataccttgaattgcttgccaaccggatcaaacaaaaaaaagcttctcgtctctc  16989300                                                  <---------ANAC55(2)                                             <---------ZAT6                                             ----------->GT1                                        --------->ZAT2                <---------TOE2(3)       <---------ZAT2                                          -----         <-----------------AG         --------->LBD16                                           -----       --------->MYB46(3)            <---------ANAC55(2)                                      <------  --------->TOE2(3)                  <---------ANAC58                       --------->ANAC46  ------- --------->ANAC58                    <---------ANAC46      --------->At4g35610                <------ --------->ANAC58             <---------ICU4<---------TOE1(3)    <----------DOF2              <------ --------->ANAC46--------->ANAC55(2) <---------ANAC58 ----------->HVH21  ------>ZmHOX2a(2)   -------- -------->SPL7  --------->MYB59      --------->ANAC55(2)   <---------At4g35610             <---------   catacgtcaacaacaatttaggtaacatcgcataatgtcccgtgctagggttacatatgacatctgcctttgtgatccacatagcagagaaatataccaa  16989400                                                   ------------>AtMYB77                                                   --------->ANAC46                                 -                                                  <---------LBD16                                  <- ->MYB46(1)                                     <---------ARR14(2)                                 -- ->MYB83                                        --------->ARR14(2)                                 <- ---MYB59                                       --------->GLK1(2)                                  -- -->AtMYB61                       --------->ARR11(3)   <-------GAMYB                              --- ---MYB111(1)         <---------TOE2(3)        <---------GLK1(1)                             <------- ---MYB46(2)          --------->MYB59     <---------TOE1(2)     ---------->DOF2     <---------GLK1(2) ->ANAC46             <---------TOE1(3)<---------ANAC46<---------At4g35610          <---------ARR14(2) --GT1  ----------->GT1           <---------ARR11(3)--------->LBD16                 --------->ARR14(2)   accagaagtatagttacaaatgtttaggttttgagagaacttcgtatgaaaatccgcagttgctacaaaagatgacttcccatatggattctgaggctga  16989500                                                           ----------->HVH21                                                           ----------->TGA1                                                         <---------ZAT2                                                         --------->ZAT2                                                         --------->At4g35610                                                         <---------At4g35610                                                <---------ANAC58                                                --------->TGA1a    ----------->GT1                             <---------TGA1a <------NtERF2                                  <---------O2     --------->CCA1(2) ----->NtERF2       <---------At5g28300         <---------ANAC46<---------ARR14(2)                  - ---------ID1  <---------ALFIN1 ---------->DOF2 --------->O2--------->MYB52(1)                    <-- ------->DEAR3(1) <---------MYB55(2)            <---------ANAC58--------->ARR14(2)              ----- --------DEAR3(1) --------->MYB46(3)           <-----------------------TaNAC69(2)               <---- --------->HVH21  ----------->HVH21----------->GT1--------->ALFIN1                              ----- ------>ATERF1(1)--------->ANAC46 --------->DAG2<---------bZIP60(2)                            ------ ---CDC5    --------->AtMYB61   ==========================bZIP_DOF    --------->WRKY18(1)      <-----   ggcgacgagaaaaacctccactcaccgtgttttgaaaaggcaaataagagacgtggacgagctgacgatatggtcaagaacaactcgttgaaatatggac  16989600           --------->ANAC58                                            --------->ARR14(2) --------->DOF2                 <---------ATHB12                       --------->ARR11(3) ----NtERF2--------->ANAC58--------->ANAC58             --------->ANAC46 ---->ANAC58               --------->ANAC55(2)          --------->ANAC58              <------ZmHOX2a(2) -----DEAR3(1)             --------->ANAC46       <----------DOF2      <---------ARR14(2) ---->ANAC58               --------->ANAC58  <---------WOX13(1)        --------->GLK1(2) --->RAP2.6(3)      <----------DOF2        --------->ATHB12            <---------ARR11(3)           - ----ORA47(1)   <---------CCA1(2)         <---------YAB1--------->ANAC58       --------->YAB1      <-   ggcaaagcatggaaccccatagctttgagacgcaatgaaacctagtgattgactttgcaggcaatctcgagagtatctcaagaatgagatcgatagggat  16989700                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               <-----                              <---------ARR14(2)                                               <-----                              --------->ARR14(2)                                              <------                           ------>ZmHOX2a(2)            <---------ARR11(3)                    <------ <---------At4g35610     <---------ARR11(3)       <---------YAB1                              ------- --------->At4g35610   <---------YAB1           --------->At4g35610  --------->GLK1(2)        ------- -------->GLK1(2)    --------->YAB1    <-----------GT1  --------->ARR11(3)                   ------->TEIL --------GLK1(2)    <---------ATHB12   <---------AHL20(2)--------->CCA1(2)             <---------AHL20(2)   ggaatctgagttttcttctccattcatgatcgtatttgtattttcttatctgatgagagatatgaacacaaaatcggtgagactcttaaataatgtatcg  16989800    --------->DAG2   ---------->DOF2 -------TOE1(2)           --------->TOE2(3) ------>SPL7              --------->YAB1 -------TOE2(2)        --------->WOX13(1)                              >>>>>>>>>ARR1 ---->TOE1(2)        <---------ATHB12                                  >>>>>>>>>ARR2 ---->TOE2(2)  ------>MYB46(1)                                         <------------CBF -----SPL7<---------WRKY18(1)                                         --------->ATHB12 ----ANAC58    ------>MYB83                                          <---------YAB1 ----ANAC58  <---------MYB59    --------->YAB1               --------->HSFC1(2)               <------ ---------AtSPL3     ------------>CBF                        <---------HSFC1(2)             <-------- ---------AtSPL8   --------->WOX13(1)                        <---------HSFB2a(1)   <-----------TBP -------->AtSPL8  --------->AHL20(2)            --------->TOE1(2)   <---------TOE2(2)     --------->TOE2(3) -------->AtSPL3  <---------AHL20(2)            --------->TOE2(2)   <---------TOE1(2)<---------AHL20(2)   tacgataaagtttgacctaattaatcaatcttattcatggttttcgctaacctaggcccaagaagcatcgtatgattgtatgagtatatatatgttaatt  16989900                  --------->YAB1                  <--------HAHB4                  <---------ICU4                 <---------YAB1                <-----------GT1               --------->AHL20(2)               --------->YAB1    <---------AHL20(2)         ================================================MADS_MADS       ------>ZmHOX2a(1)         --------->TOE2(3)      --------->AHL20(1)          --------->YAB1     <----------DOF2         <---------AHL20(2)             --------->AHL20(2)  <---------ARR11(3) <---------ICU4      --------------->AGL15    <---------AHL20(2)  --------->ARR11(3)--------->ICU4       <---------------AGL15  <---------AHL20(2)           <-------  <-----------ARR10 <---------YAB1    <-----------GT1       <---------AHL20(2)    <-------TEIL ------CBF------>ZmHOX2a(1)  --------->AHL20(2)    --------->AHL20(2)    --------->LBD16  <---------- -YAB1   --------------->AGL15  <---------AHL20(1) <---------AHL20(2)  <---------LBD16--------->AHL20(2)   gtagtatctttccttatttatcattattcatttatatattttaccaaaaaaaataaaatcatttatatttttttcctgaaaacattcattttatactttt  16990000                                                             --------->AHL20(2)                ------                                                             <---------AHL20(1)                <-----                                                             --------->AHL20(1)            <---------ANAC58                                                             <---------AHL20(2)            <---------ANAC58                          --------->GLK1(1)                 <---------AHL20(2)       <---------AHL20(2)                  <---------AHL20(2)                        --------->AHL20(2)       --------->AHL20(2)                  --------->AHL20(2)                    <---------AHL20(2)           --------->AHL20(1)               <---------ICU4                           --------->AHL20(2)       <---------AHL20(2) ---DOF2      --------->ICU4                        ----------->GT1             --------->AHL20(2) -GT1         <---------YAB1                  <---------ATHB12  <---------YAB1  <---------AHL20(2)---   ctgaaaacaagtcttgataattaatctgaattcttcttaaacagtctaatcaaggtgtttaattttatttttggagtccaaattaaataaaatgcttgca  16990100                                                     >>>>>>>>>ARR1                          ------->TEIL                                                     >>>>>>>>>ARR2                          ---------            --------->HSFC1(2)                      --------->ATHB12                       <---------GLK1(2)            <---------HSFC1(2)                     <---------YAB1                   <---------At4g35610      ---------->DOF2                         <---------TOE2(3)             --------->AHL20(2)      <  ---------->DOF2                            ---------->DOF2            --------->ANAC58 --------->ANAC58 --->HSFB2a(2)                           <---------MYB46(3)             ----------->GT1  --------->ANAC58 ----HSFB2a(2)      <---------CCA1(2)    ----------->GT1                --------->ANAC58 --------->ANAC46 ------->DOF2  <---------CCA1(2)   <<<<<<<<<<<<<<<<<LFY          <---------AtLEC2---------->DOF2   <-   gaaagaaagaaagaagcatctcttatctcatagcagagaacaatggttaaagtatgattgtatatttgtatggcacgataaaataaagctcacgaatctc  16990200  Previous    Next  AGI:  At5g42430.1    Description:  F-box family protein. Identical to Putative F-box protein At5g42430 [Arabidopsis Thaliana] (GB:Q9FIH4); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G30920.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60954.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 16988540    to: 16989727    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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