Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ZAT14                 <---------ZAT14                 <---------ZAT18                                    <-----------GT1       ------>MYB83                                                 <<<<<<<<<GT-1       ------>MYB46(1)                                            <---------WOX13(1)      --------->ANAC58                                        <---------WOX13(1)     --------->ATHB12      --------->ANAC58                                      --------->ATHB12        <---------YAB1      --------->ANAC46                                     <---------YAB1 --------->ALFIN1     --------->MYB46(3)                         --------->ALFIN1--------->ATHB12  <----------DOF2  --------->ANAC46   <---------ZAT6--------->ARR14(2)   <---------SPL7----------->RAV1(2)          -- --ZAT18   --------->MYB52(1)      <---------ARR14(2) <---------------AtSPL3  <---------ZAT18      ==   ttaaacaccagccaaacagagcagtcttaaaacactgaatccagagccaagtaggggttgtacgattgatttacctgtggagcactttgattagcgcatg  16958600                                               <---------SPL7                                           <---------ALFIN1                                           --------->DEAR3(1)                                           --------->AtMYB61                                          --------->MYB46(3)                                        --------->YAB1                                     --------->WOX13(1)                                   <---------At4g35610             <------NtERF2    <-------TEIL                                --------->At4g35610  ----------->GT1             <------MYB83                             ----------->RAV1(2) --------->SPL7    --------->At4g35610                     <------ZmHOX2a(1) <---------ATHB12 ---------->DOF2          <------MYB46(1)<----               <---------ZAT6--------->At4g35610<---------MYB52(1)----------->RAV1(1)           ----- ---->ZmHOX2a(2)--------->ATHB12<---------At4g35610 <------ZmHOX2a(1)  ---------->DOF2 ----------->TGA1 ===========================HOX2a_HOX2a--------->MYB46(3)   ---------->DOF2   --------->CCA1(2)------   atccgaaggctatacgagtgataggagtctcttctgcagcaatcaccaccgtaaggagtaaagaaaggcaccagaaagagatttggttcatgacgatgtg  16958700                                                                                         <-------TEIL                                                                                        --------->ARR14(1)                                                                                        --------->GLK1(2)                                                                                       <---------GLK1(2)                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                       --------->ARR11(1)                                                                                     ----------->ARR10                                                               --------->CCA1(2)    <------NtERF2                                                               <------ZmHOX2a(2)   <---------At4g35610                                ---------->DOF2               --------->ARR11(3)   --------->LBD16                            <---------LBD16                   <---------ARR11(3)   <------NtERF2                            --------->LBD16           --------->TOE2(3)        <---------DEAR3(1)----                           ------->GAMYB            ----------------->AGL3     --------->ANAC58  ----                         -------->P     --------->GLK1(2)     --------->AGP1   --------->ANAC58<-----                        --------->MYB52(1)          <---------YAB1           <---------ANAC58--------                     --------->ANAC58   <---------KAN4(2)     <---------ARR14(2)   ------>NtERF2<---- -----ANAC46         --------->ANAC46   --------->ARR14(2)    --------->ARR14(2)  --------->DEAR3(1) ------>GT1          --------->ANAC58 <------ZmHOX2a(1)   ---------->DOF2    <---------ANAC58<------- --->ALFIN1        ---------->DOF2    ================================HOX2a_HOX2a--------->RAP2.3(1)   gtgaatcgaagagaaaaccctagaagcaaccgtggaaagaggaatcttcaagttttcattaaaagatccacaagttttggctcgccgcagattcggttcc  16958800                                                                   <----------DOF2 -->NtERF2                                                        <---------ANAC58 ----->LBD16            <---------YAB1      <----------DOF2       <---------ANAC58      <----------DOF2 ----LBD16     <---------MYB52(1)           <---------DAG2   <---------O2               <---------DAG2 ->ARR14(2)<---------At5g28300         --------->At5g28300   --------->O2   <---------AHL20(2) -----ANAC46  <-------GAMYB<---------WOX13(1)     <-----------GT1 <---------ANAC46 <----------DOF2 --ARR14(2)<---------DOF5.7(2)        ----------->GT1<----------DOF2       --------->AHL20(2) <------   ggcgattttcagttaccgttgggattttgatagacagagactgtaactttttctactttcttctcgtggctttgatttttaatagctttactttttcttt  16958900                                                                                           <---------YAB1                                                                                         <---------ICU4                                                                                        <---------YAB1                                                                                        <------------                                                                                        <---------AHL20(2)                                                                                       <-------------                                                                              --------->LBD16 <------                   <---------ANAC58                                          --------->ANAC55(2)  <--                   <---------ANAC46                                       <---------ARR14(2)-------->HAHB4                   <---------ANAC58                                       --------->ARR14(2)<--------   <---------At4g35610                                            ----------->GT1     --------->YAB1   --------->At4g35610                   <---------LBD16  ----------->GT1 <-----------GT1--------->YAB1 <-----------RAV1(2)            ------->TEIL            ---------->DOF2  --------->RVE1(1) --------->ICU4 ----DOF2    <---------YAB1  <---------YAB1          *TSS--------->DAG2  --------->CCA1(1) <---------ATHB51   tcttcagatgaaatttctattgcctggttttatgaatcttttttctgggttccaaacaaaaagtgaatttgtgaaatatccgtattatttataattatgg  16959000                                                                   <---------ANAC58                                                                 <---------AHL20(2)                                                              <---------ICU4    <------------CBF                            <---------AHL20(2) <---------ANAC55(2)  <---------YAB1                         --------->YAB1      --------->AHL20(2) ---AGL15                                <--------ATHB1      <---------AHL20(2)  <---------ARR11(3) ----AGL3                               --------->ICU4     --------->YAB1        --------->ARR11(3) ---TOE2(3)                         ------------>CBF  <---------YAB1            --------->RVE1(1) -------KAN4(2)      <---------ARR14(2) <---------ATHB12 ------->TEIL           --------->CCA1(1) -ICU4      <---------AHL20(2)>>>>>>>>>MYB98    --------->AHL20(2) <---------ANAC58            <-----   aatgaccattgaatttttttgtagatttgtttaacatatgcaatgattttttaaatatgaatattaattacttgagaaacaaatatctactacatattaa  16959100                                               ----------->GT1                                            <-----------RAV1(1)                         <---------AHL20(2)                                        --------------->AGL15        --------->ATHB12  <---------AHL20(2)            <-----------GT1             <---------------AGL15       <---------YAB1     --------->AHL20(2)   ------->TEIL   <----------DOF2      <-----------------AGL3 <---------AHL20(2)--------->ANAC55(2) ----AHL20(2)<-----------GT1         <-----------GT1      --------->AHL20(2)    <---------ANAC55(2)   aaatgaatttgtattttcccctttgaatagaaatcaaattcactatatgtggcaaatagattaattcattttgatttgtattacataatttaaattgttt  16959200                                                                                    <---------AHL20(2)                                                                            <---------YAB1                                                                         <---------AHL20(2)                                                                        <---------AHL20(2)                                                                     --------->AHL20(2)                          <---------AHL20(2)                        <---------AHL20(2)                         --------->AHL20(2)                         --------->AHL20(2)            ---              --------->YAB1                            <---------ETT(1)--------->AHL20(2)        <--             ----------->GT1                      <----------DOF2 --------->YAB1    --------->AHL20(2)             --------->ICU4                       <---------DAG2--------->AHL20(2) --------->AHL20(2)             <---------YAB1                 --------->YAB1  --------->AtMYB61--------->YAB1    <-----   atctactactatgtgatgataaatccatttaatatgtgttcttctatgaaaactttatccgaccaaaaaaataattttatgaaaattttattccaatttt  16959300                           >>>>>>>>>>ABI3                          --------->AtLEC2                          --------->ANAC58                     <---------ARR14(2)                     --------->ARR14(2)                   --------->LBD16                  --------->ANAC58                  --------->ANAC58                  --------->ANAC46         <---------AHL20(2)>>>>>>>>>>FUS3        --------->AHL20(2)--------->ANAC58    --------->ZAT6   ----------->GT1--------->LBD16           <-----------GT1                    <---------ANAC46 ------>HSFB2a(2)<---------LBD16        <---------AHL20(2)                   <---------ZAT14 -------HSFB2a(2)--------->LBD16        --------->AHL20(2)        ----------->GT1----------->GT1 ------GT1      <---------LBD16      <---------GLK1(2)      <---------LBD16  --------->ZAT14   ctagattgtataaaatttccccggaaccatgcaaattcagaattttttacactagagacttctacggatggcaaaattgtgaagtgtaatattgttttag  16959400                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                 <---                                                                                                 ----                                                                                              -------                                                                                            <--------ATHB1                                                                                            <--------HAHB4                                                                                            <--------                                                                                            ---------                               ----------->GT1                                              ---------                         ------>ZmHOX2a(2)                                             --------->ZAT18                        <------ZmHOX2a(2)                                              <---------ZAT18                       --------->ARR14(2)                                   ----------->GT1<---------ATHB12                   <---------At4g35610                                     --------->DAG2  --------->ICU4   <---------TOE2(3)   <---------ARR14(2)      --------->ANAC46           ---------->DOF2  <---------ATHB51   acattaagaaacaagtttcgaagcggatcgttttagttaaaaggtttacaaacaatattatctcttattgaatagaaaaagtgaattggtgcaataatta  16959500  Previous    Next  AGI:  At5g42370.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO66319.1); contains domain SSF56300 (SSF56300) Range:  from: 16956346    to: 16958953    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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