Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------------->AGL15                                      <-                                       ----------------->AGL1                        --------->ARR11(3)                               --------->TOE2(3)                                     --------->ARR14(2)                         --------->LBD16--------->TOE2(3)                            <---------ARR11(3)                        --------->ANAC46<---------------AGL15                        <---------GLK1(2)       <---------At4g35610   --------->GLK1(2)        <-------TEIL                   <---------ARR14(3)       --------->At4g35610   --------->ICU4       <---------KAN4(2)                  --------->ARR14(3)   caaaactgcttctgcccaattcttctccgaaattcttagtagcctaaatgagaacatccatttgaaagatgaaatttctcagtccaagattttcaaaata  16948400                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                         --------->AHL20(2)    --------->KAN4(1)                                                              --------->YAB1    <---------KAN4(1)                                                             <---------YAB1  >>>>>>>>>ARR2                        <<<<<<<<<WRKY18                        <---------ARR14(3)  >>>>>>>>>ARR1                      <-----------HVH21                        --------->ARR14(3)  >>>>>>>>>ARR1               --------->GLK1(1)             <------ZmHOX2a(1) <---------GLK1(2)  >>>>>>>>>ARR2               <---------GLK1(1)           <---------TOE1(2)   --------->ARR11(3) <------ZmHOX2a(1)          <------ZmHOX2a(1)        --------->ICU4           <---------ARR11(3) --------TOE1(2)          <---------TOE1(2)     <-----------GT1               --------->ARR14(2)  ---   gtaggattgttctgtccaagattactagtaggatttctctgtcaaaaatttcacaattagtaggatttatctcagtccaagattttcataactaaatata  16948500                                                                     <---------AHL20(1)                                                                     --------->AHL20(1)         --------->YAB1                                              <---------AHL20(2)  <---------AHL20(2) -->AHL20(1)                                        --------->AHL20(1)             <---------ANAC55(2) -->ARR11(3)                                        --------->AHL20(2)       --------->AHL20(1) ---AHL20(2)                                    --------->AHL20(2)<---------AHL20(2)    --------->AHL20(2) ---ARR11(3)                                    <---------AHL20(2)--------->AHL20(2)    <---------AHL20(2) ---AHL20(1)                           <-----------GT1          <---------YAB1     --------->ANAC55(2) -->AHL20(2)                         <---------WOX13(1)   <---------ANAC46   <---------AHL20(1) ->AHL20(2)                     <---------At4g35610 <---------AHL20(1)       --------->AHL20(2) -------->GT1                   --------->At4g35610 <---------AHL20(2)       <---------AHL20(2)    <-   ttgtaaaattttcatatttcaactatatgtcaatagctgatttacaatatttattttattgtgtttattaatatatcaatttattaagtattaatttcta  16948600                                  <---------YAB1                                <---------AHL20(2)                                --------->AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                           --------->AHL20(2)                       --------->ANAC58                              <-----------GT1           <-----------GT1     <---------AHL20(1)  <---------YAB1 <---------ICU4 --------AHL20(2)      --------->ANAC58<-----------GT1      --------->CCA1(2)            <-----------GT1   aatatttgctgtattactaaatttcaagcccaaattattttttatcttatactatttttgtgatatgctaattacaaattacttagcaaaattacatctt  16948700                                                                                               ------                                  ---------->DOF2                                             -------                       <---------AHL20(2)                                                    --------                <<<<<<<<<TBF1 <---------ANAC58                  ------>ZmHOX2a(1)<---------AHL20(2)            <-----------GT1   <---------ANAC58                *TSS--------->REM1(1)       <----------ID1           <<<<<<<<<<GT-3b    <---------ANAC46         ----------->RAV1(2)       --------->AHL20(2)     <----------DOF2 <----------DOF2     ------------>CBF------>ZmHOX2a(1)      --------->AHL20(2) --   agcacctctttatttttcttcttcttttatttgcgagaaagacaacaattcagtctctcctgtctcctacatgacttaaaaattaaaataaaacgaaaag  16948800                                                                                  --------->ARR14(2)                                                                       <---------ARR11(3)                                  --------->ARR11(3)                   <---------ARR14(2)                                --------->MYB59                        --------->ARR14(2) --->DAG2                   <----------DOF2                            --------->GLK1(2) -->DAG2                <-----------GT1   <---------ARR14(2)           --------->ARR11(3) -->DOF2               <-----------GT1    --------->ARR14(2)   --------->GLK1(1)  <---------ARR14(2) -------->DOF2     <----------DOF2<---------ARR11(3)     <---------DEAR3(1)  <----------DOF2   ggaaagcgaaattgttccttcctttttagccttttaggtcttcgaattctcaattttcttcggtgatttctaaaatctgctttggatttggagaaacaac  16948900                              --------->LBD16                            <---------LBD16                         <---------GLK1(1)                         --------->GLK1(1)                         --------->HSFB2a(1)                         <---------HSFB2a(1)                               <---------At4g35610                        ------->TEIL --------->At4g35610              <----------DOF2                        <-----------ARR10                       <------MYB83                        <---------ARR11(1)                      <------MYB46(1)                        <---------ARR14(2)                      ----------->GT1                       <---------CCA1(2)                   <XXXXXXXXXXXXXXXXXXXXMIR161.1                       <---------GLK1(2)             <---------ARR11(3)  --------->HSFB2a(2)            ------->TEIL--------->ARR14(2)           --------->ARR11(3)  <---------HSFB2a(2)   tctgtctatgtatgaatctcgtttcgaatctccggagtttgctcaatgtaagtgagttcttcgatttggttactttcagaagcgaaatttcaaaaactac  16949000             <---------YAB1      <------MYB46(1)<---------GLK1(2)      <------MYB83   --------->ARR14(2)      <---------ANAC58               --------->At4g35610      <---------ANAC58               <---------At4g35610     --------->MYB46(2)              --------->ZAT2     <---------MYB46(3)              <---------ZAT2     --------->MYB111(1)         --------->HSFB2a(2)          --------->ETT(1)                   <---     <---------AtMYB61           <---------HSFB2a(2)     <----------DOF2              <----------DOF2     --------->MYB59 <---------ARR14(2)      --------->ICU4  ---------->ID1          <---------ANAC58     --------->MYB111(2)        <---------LBD16    ----------->GT1 --------->KAN4(1) <---------ANAC58   ttgtagtttggtgctacgattcagatttgtagtttctggagctggtaatgaacaggttactttgtcggaatattggagttagagtttgcttttacatgtt  16949100                                         --------->YAB1                                      <----------DOF2                                 ------>ZmHOX2a(2)                <---------DAG2                                <---------GLK1(1)                 <----------DOF2                               <---------ARR14(2)        --------->ANAC46                               <---------ARR11(3)        --------->ANAC58                  <---------                               --------->ARR14(2)        --------->ANAC58             <---------MYB52(1)                               <---------AGP1        ------>ZmHOX2a(2)         <---------At4g35610             ----------->GT1   --------->ARR11(3)  <---------ARR11(3)          --------->At4g35610 ------AHL20(2)               <---------CCA1(2)    --------->ARR11(3)     --------->YAB1   <---------AHL20(2)   taatctctcattaactggtttatagaataagtggatctcgctataatgtggatgatctcacacaaatgctttttgatcatcagcttcagttatttacatt  16949200                                                                                  ------>ZmHOX2a(2)                      <---------ANAC46                                           --------->At4g35610                 <-----------RAV1(1)                                             <---------At4g35610       --------->AHL20(1)              <---------ANAC58                         --------->ARR11(3)       <---------AHL20(2)              <---------ANAC58                    --------->ICU4       <---------AHL20(1)--------->ZAT18                                <---------YAB1            <-- <XXXXXXXXXXXXXXXXXXXXMIR417       <----------DOF2         <---------GLK1(1)--------->YAB1        <-- --GT1 --------->AHL20(2)<---------ZAT18          --------->YAB1      --------->YAB1           <-----   ttggacaaatttattgtttttgttgtgtccacttgctcttttcttggtgctatcaaatttgatttctgtgaatcgtaattgtgatctgcatttgcaggtt  16949300  Previous    Next  AGI:  At5g42350.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At5g42350 [Arabidopsis Thaliana] (GB:Q9FII2;GB:Q8VXV3); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G42360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66257.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro Range:  from: 16948762    to: 16951231    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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