Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------MYB52(1)                                 --------->HSFB2a(2)     <---------TOE2(3)       <------MYB83                                  ----------->RAV1(2) ---------ARR11(3)           <------MYB46(1)                               <---------At4g35610 -------->ARR11(3)      --------->DAG2                                   <-----------GT1 --->YAB1--------->CCA1(2)   <---------DEAR3(2)  <---------ZAT6    <---------TOE2(3)                - ---ATHB12             ---------->DOF2      --------->YAB1         --------->MYB59<---------HSFB2a(2) >WOX13(1)     --------->TOE2(2)           <---------YAB1          <---------TOE1(3)   --------->YAB1   aagatttatggatataacatatgagaaaagtcggttttttcatatatgatagtgttgaattcatacatttaggtttcacctgttctaaaacataacattt  16915500                                                                         <----------DOF2                                                                        <---------DAG2                    <---------ANAC46                                  ------->TEIL             <-----                    ----------->GT1                               --------------->AtSPL8       <-----                    --------->ANAC55(2)                        <---------AHL20(2)        <---------AHL20(2)                    <---------ANAC55(1)                      --------------->AGL15   <---------AHL20(2)                    <---------ANAC58                         <----------DOF2        --------->AHL20(1)                    <---------ANAC55(2)                      <---------------AGL15  <---------AHL20(1)                    <---------ANAC58                        <-----------------AGL2<---------AHL20(1)      ---------->DOF2                           <---------YAB1 --------->AHL20(2)--------->AHL20(2) ---------->GT1    <-------TEIL               --------->YAB1<-----------------AGL3--------->AHL20(1)   tcccgttaaaaagcatagcgatacgtgaattgggcctaaaacttggacttataatttgggcttctttaaatggaccttttcaaatatatatttgattaag  16915600                                                                                         ------->TEIL                                                                                <---------HSFC1(2)              <---------AHL20(2)                                                --------->HSFC1(2)       ------>ZmHOX2a(1)                 <-------GAMYB                          <---------HSFB2a(1)      --------->TOE2(3)                 <---------MYB46(3)                     ------->TEIL    ------>MYB83         --------->ARR11(3)                                  ------->GAMYB    ------>MYB46(1)      <---------ARR11(3)  <---------TOE2(3)              <---------MYB52(2)  ------->GAMYB         --------->YAB1 <--------P                 ---------->DOF2--------->TOE1(3) --------->MYB46(3)  ---------->DOF2<---------YAB1       <----------ID1   <---------DOF5.7(2) ----TOE2(3) --------->AHL20(2)  --------->GLK1(2) ------------>CBF       --------->MYB52(1) ----TOE1(3)<---------AHL20(2)  <---------GLK1(2) ------------------------>ANAC81--------->TOE2(3)   gtaaccatccttattttaaattctaaagataatcgattctggttgttaagaaaatcaatagaacaaaaaaaagagataacgaaccttcacgaatgttttg  16915700                                                                   --------->ANAC58                                                           -------->HAHB4                                                           <---------ICU4                                                           --------->YAB1                                                          <---------ATHB51                         <-                                            --------->KAN4(2)      --------->ANAC58    ---------->ID1                                           <---------KAN4(1) <---------YAB1       <---------ARR11(3)                                  <---------YAB1          --------->ICU4      ---------->DOF2     <--         --------->ATHB12        <---------ARR11(3)     <---------ICU4    --------->TOE2(3)  <-------    <-----------GT1              --------->ARR11(3)--------->ZAT14 ----------->GT1--------->ARR11(3)   ctatattttcttcattagaaaaaaaaactagataatatcatttgaatgttctgtttactaattatgaacaagtaaaacttaaaagatttgttgttatact  16915800                      <---------AHL20(2)                    <-----------TBP                  --------------->AGL15          <---------ICU4        --------->ANAC46                   <---------AHL20(2) --------ARR11(3) <---------------AGL15 <------------CBF           --------->AHL20(2)       <-------- -------CCA1(2)<-----------GT1  --------->ZAT6                   ----------->TBP        <----------DOF2 ----GT1 <---------YAB1       <-----------GT1                <---------ANAC46 <----------DOF2   atatctatcttataatttctctatttatagattaacacaacaaattgcgataacatttctcttgcctatataaatctgagctttattcatctttttacaa  16915900                      ---------->DOF2                           <---------ZAT6                    --------->AHL20(2)                      <---------ANAC58                    <---------AHL20(2)                      <---------ANAC58                    --------->YAB1               <---------ARR11(3)                <----------DOF2                 --------->WOX13(1)              --------->ARR11(3)          <---------ANAC58               ------------>CBF       --------->YAB1    <----------DOF2      <---------ANAC58             ------->GAMYB       <---------TOE2(3)  <----------DOF2    --------->ATHB51 ---GT1     --------->MYB46(3)   <---------YAB1 <---------CCA1(2)     <---------YAB1   <---------AtLEC2   caaaacaagtttcaacagtcaattaaaagaaaattaagaatgagaactatatatctttctttgctagtgtttattattgtcttggctttgaatgaagtta  16916000                                                                             --------->ZAT2                                                                             <---------At4g35610                                                                             <---------ZAT2                                                                             --------->At4g35610                                                                           <-----------bZIP910(2)                                                                          --------->TGA2(2)                                                                         <-----------TGA1                                                                         --------->TOE2(3)                                                         <---------YAB1  <-----------HVH21                                                      --------->AHL20(2)--------->ANAC58                                                      <---------AHL20(2)--------->O2                                                   --------->ARR11(3)   --------->bZIP60(2)                                              --------->LBD16           --------->TGA1a           ---                  <---------ALFIN1           --------->HSFB2a(2)        <---------O2            -----              ------>ZmHOX2a(1)              <---------HSFC1(1)  <---------ZAT2                ------          --------->ANAC46                   --------->HSFC1(1)  <---------At4g35610           ------        <---------ALFIN1           ----------->GT1 <---------ARR11(3)   --------->ANAC58       <-----   --------->ANAC58   <---------------AGL15  <---------HSFB2a(2) --------->At4g35610           <-----   --------->ANAC58  --------->TOE2(3)      <---------LBD16      --------->ZAT2              <------ZmHOX2a(1)   tggccaagaaacactcctcaacacctaaattaagaagaagtgattttccagaagattttatttttggagctgcaacgtcagcttaccaagtcgaaggagc  16916100                                                                ---------->DOF2                                                              --------->CCA1(2)                                                           ----------->GT1                                                      --------->LBD16 --->NtERF2                                         <---------LBD16 ---->ATERF1(1)                                   --------->ARR11(3)               ------>ZmHOX2a(2) --->At4g35610                                    <---------ARR14(2)             --------->ARR11(3) --->ZAT2                                         --------->ARR14(2)             ------->TEIL ----ZAT2                                        --------->CCA1(1)               <---------AGP1 ----- ----At4g35610                    <-------TEIL   --------->RVE1(1)               <---------ARR11(3) <   tgcccatgaagatggtagaggtccaagtatttgggatacattctctgagaaatatccggagaagataaaagatggtagcaatggatctattgcaagtgat  16916200                                                                                           <-------MYC2                                                                                           ------->PIF5                                                                                           <-------PIF5                                                                                           ------->MYC2                                                                                           ------->MYC3                                                                                           <-------MYC3                                                                                          <---------ANAC55(2)                                                                                          ===========                                                                                          <---------O2                                                                                          ===========                                                                                          ===========                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                          --------->ANAC55(2)                                                                                          --------->O2                                                                                          --------->TGA1a                                                                                          --------->bZIP60(2)                                                                                   ------>ZmHOX2a(2)                                                                                   ==================                                                                                  <------ZmHOX2a(2)                                                                                  ===================                                                                                 --------->ARR14(3)                                                                                 <-----------ARR10                                                                                 <---------ARR14(3)                                                                                 <---------AGP1                    --------->CCA1(2)                                            <---------ARR11(3)             --------->ANAC58                                                    <---------ARR14(2)             --------->ANAC46     --------->TOE2(3)                              --------->ARR11(3)       <----------DOF2--------->ALFIN1                                           --------->GLK1(2)      <---------ICU4--------->ALFIN1                          <-----------GT1    --------->ARR14(2) ---->ICU4   --------->ANAC58    --------->REM1(1)         <---------GLK1(2)    <------ZmHOX2a(1)---- -----------GT1    --------->ARR11(3)              ------>NtERF2      <---------ANAC46    <---------TGA1a   tcttaccatctttacaaggaagatgtgggtttactacatcaaattggtttcgatgcctatagattctccatctcgtggtcgaggatcttgccacgtgaga  16916300                    <---------ZAT2                    --------->ZAT2                   ------>MYB46(1)                   ------>MYB83                --------->MYB46(3)               -------->P         <------ZmHOX2a(1)  ---------->DOF2------->GAMYB                                                        ------>NtERF2 ============bZIP_DOF                                                                --------->DEAR3(1) =======================MYC_MYB                                                   --------->ANAC46 ========================MYC_MYB                                                  --------->ANAC58 ===============HOX2a_HOX2a                              <----------DOF2   --------->ANAC58 ===============HOX2a_HOX2a             --------->MYB46(3)       ---------->DOF2  --------->ANAC58 ----->GLK1(2)--------->WOX13(1)   --------->YAB1 --------->WOX13(1)       --------->ANAC58   atctaaaaggaggaatcaaccaagctggtattgactattacaacaacttgatcaatgagcttttgtctaaaggaattaagccattcgccaccattttcca  16916400  Previous    Next  AGI:  At5g42260.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G44640.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G44450.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G25630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67226.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 16915940    to: 16917463    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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