Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------YAB1    --------->ARR14(2)    <---------ARR14(2)  ===================================================================================================  --------------->AGL15  <---------------AGL15 --------------->AGL15 <---------------AGL15 ----------------->AGL1 ---------------->AGL1 -----------------AG ---------------->AGL3 ---------------->AGL2 -----------------AGL3                                            --------->AHL20(2) --------------->AGL15 -----------------AGL1                --------->At4g35610         <---------AHL20(2) <---------------AGL15 -----------------AGL2                <---------At4g35610---------->ID1             ----------------- ---------------->AG     <---------ZAT18   --------->ZAT18       --------->AHL20(2) ----------------- ->DOF2    ---------->DOF2   <----------DOF2        <----------DOF2            <---------GLK1(2) <---   attccaaatttgggaaagacattatagtggtcttttaggcagaagtctactagacttttttcgcttatttaataaactctagactctccatatatagtct  16882900                                                               --------->AHL20(2)                                                          --------->AHL20(1)                                                          <---------AHL20(1)                                                         <---------AHL20(2)                                                       --------->AHL20(2)     --------->AHL20(2)                           <---------AHL20(2)     <---------AHL20(2)              --------->ANAC58 --------->AHL20(1)                     --------  --------->YAB1         <---------TOE1(3)       <---------AHL20(2)                     --------->AHL20(1) =MADS_MADS              <---------TOE2(3)       --------->AHL20(2)                     <---------AHL20(1) >AGL2                  ---------->DOF2        ------->TEIL<---------AHL20(2)<------ZmHOX2a(1) >AGL3                 <---------AHL20(2) --------->MYB52(1)   <---------AHL20(2)      <---------AHL20(2) ------ZAT14       --------->AHL20(2)--------->ANAC58 <---------AHL20(1)  <---------LBD16<---------AHL20(2)   tcactaataaaactcttgcaaatatttaaagttttggacacgaataacgaatttaatatatatattttaatcaagttcaggaacgatatatatatttata  16883000                     <------MYB83                     <------MYB46(1)                <---------AHL20(2)               --------->AHL20(1)                                                                  --               <---------AHL20(1)                                                                 <--             <-----------------AGL3                                                           <------      --------->AHL20(1)                                                                     <-------      --------->ARR11(3)              --------->YAB1         <---------ARR11(3)              <-------      <---------ARR11(3)              <---------ICU4         --------->ARR11(3)              --------      <---------AHL20(1)             --------->ICU4      ---------->DOF2              <---------ETT(2) ->YAB1    <---------AHL20(2)   --------->YAB1  ---------->DOF2                       --------->ETT(2)   aaccctgatatattttatatatttggttctccgattgtaatcagtatgttgaaagaacacaaagttctcaattcaaatgagtcttaagtcgacaattttt  16883100         --------->AHL20(2)        --------->AHL20(2)        <---------AHL20(2)                                                              ---------->DOF2 <---------WOX13(1)                        <---------ANAC58                           ------>ZmHOX2a(2) ------->ATHB12                            <---------ANAC58                        -------->HAHB4 -------YAB1                               <---------ANAC46                        --------->ATHB12 ---AHL20(2)                           <----------DOF2                            --------->ICU4 --AHL20(2)                           <---------ANAC58                            <---------YAB1 --AHL20(1) --------->AHL20(2)        <---------ANAC58                      --------->DAG2          < ->AHL20(2) <---------AHL20(2)   <----------DOF2 --------->ANAC46          ---------->DOF2        ---   ttgattgaaaataattttttatgtaagatgtgattctttggctttgcttatactccaacgagaagtaagagcatacaaaaagtaatgatcgaaagcgaat  16883200                                                                                                    <                                                                                                    -                                                                                                    -                                                                                               ------                      --------->ZAT14                                                          ------                     <----------DOF2                                                           ------               <---------ALFIN1                                                                <-----          --------->ANAC58                <-----------GT1               <---------DAG2       <-------          --------->ANAC58            --------->AHL20(2)             --------->ZAT6         <--------     --------->MYB52(1)               <---------AHL20(2)            *TSS<----------DOF2   --------->ANAC46 ----------ID1 --------->REM1(1)     --------->YAB1          <---------At4g35610      <---------ANAC58 ------->DOF2----------->RAV1(1)<----------DOF2              ----------->RAV1(2)      <---------ANAC58   gaaagacaaacgaagcaacacctctttactcattctttatattaatacctctcaggcttcttcacctgttaacactttttcttcacttgcctacagcacc  16883300 ---------At4g35610              <---------AtLEC2                                               <---- -------->ZAT2                 ------>MYB83                                                     <---- -------->At4g35610            ------>MYB46(1)                                                ------- ----->RAV1(2)            ------>NtERF2                                                       <------ --->ZAT2                --------->DEAR3(1)                                           --------->YAB1 --->At4g35610       --------->DEAR3(2)                                           <---------ICU4===== ----At4g35610     <---------ARR14(2)                                            <---------YAB1 <---- --ALFIN1          --------->ARR14(2)                <---------ICU4              <---------ATHB12 --- -At4g35610       <------ZmHOX2a(1)        <------ZmHOX2a(1)                   --------->YAB1 <------   tgagctctcttaaaaatggaggaaacgacgaccttccatggactaggacacctcttcattacaatcttcttgtactgcttctcatcattcatcgtggctc  16883400                      <---------ERF1                     <---------RRTF1(3)          --------->bZIP60(1)        ----------->RAV1(1)       ------->GAMYB <---------RAP2.3(2)       --------->DREB2C(2)       --------->ANAC46--------->ZAT18      --------->MYB46(3)           --------->LBD16      --------->DEAR3(2)          <---------HSFB2a(2) -----LBD16          <---------DEAR3(1) --NtERF2 <---------bZIP60(1)     --------->LBD16 -->ARR14(2)         <---------RAP2.3(3)                      <-----------GT1           ------------- ---ARR14(2)--------->TGA2(2)     --------->HSFB2a(2)  --------->ANAC58                 ------------- ===================RAV<------NtERF2  ---------->DOF2  --------->ANAC58   <----------DOF2--------->ANAC55(2) -------RAV1(2) <---------AtLEC2 <---------LBD16       --------->ANAC46--------->LBD16  ------->TEIL ------>LBD16   <---------ICU4<-----------HVH21 <---------ZAT14        ------>NtERF2<---------------AtSPL3 ---PCF2<---------DDF1<---------RAP2.3(1)       --------->ZAT14      <---------LBD16<---------------AtSPL8   cggtgataaccgacatcagcatggctgcgctatgtcccggaaaagacgagtgttctctcgccatttacctctccggctttcaacaagttgtacgtactat  16883500                                                                                                   <-                                                                                                   ==                                                                                                  ===                                                                                                  <--                                                                                                  ---                    --------->TOE2(3)                                                            ----       <-----------GT1                   ----------->GT1                                         <---     --------->AHL20(2)               --------->MYB52(1)                                       <----- -->AtSPL8       <-----------GT1  --------------->AGL15                                   --------->YAB1 -->AtSPL3    <----------DOF2     <---------------AGL15                                  <---------YAB1   ctacaaattaaaccctcttttacattatttgtgtttcaaaaaacagaaaataagcgactgtttttttgttctatgtgaaattcaacttattttcataact  16883600         <-----------HVH21        --------->TGA1a                                                                            <-        --------->bZIP60(2)                                                                        -- -----------AtMYB77                               --------->AtLEC2                                --- =================MYC_MYB                         ----------->GT1                              ------ =================MYC_MYB                     <---------At5g28300                              <----- -------At5g28300                            <-----------GT1<---------ICU4                >>>>>>>>>GATA-1 ----->P--------->O2                      ------>MYB46(1)   --------->AHL20(2)          ----------->GT1 ----->MYB52(1)                           ------>MYB83     <---------AHL20(2)        --------->CCA1(2) --------GT1         <<<<<<<<<GATA-1    <---------MYB59    --------->AHL20(2)       --------->ARR11(3) ----MYB52(2)       <-----------GT1  <-----------GT1     --------->YAB1             <---------ARR11(3)   aaccgttcccatgtcagtagtttatctattttctaaattttaccaaattaccatgtaaaaaataatttcatgttttttttttgaaagatatagataaata  16883700         <---------YAB1         --------->ATHB12            <---------ANAC58       --------->YAB1          <---------YAB1 ----------------->AGL1       ----------->GT1         <------ZmHOX2a(2)   <---------MYB46(3)      <---------ATHB12    --------->ALFIN1  <---------bZIP60(1)  <---------ATHB12      --------->ALFIN1    --------->bZIP60(1)<-----------HVH21 --------AHL20(2)   <---------ANAC55(2)  <---------YAB1     <---------ANAC58 ------->AHL20(2)   --------->ANAC55(2)--------->YAB1      --------->HSFC1(2) ------>AHL20(2)   <---------LBD16     <---------ICU4      <---------HSFC1(2) --->AHL20(2)    <------ZmHOX2a(2)    --------->ICU4 <---------ANAC46  --------->ANAC58    <---------ANAC58 ----AHL20(2)   --------->ARR11(3)  --------->YAB1<---------AtMYB61    --------->ANAC58    <---------ANAC58   tttaatcaatggttattagatcacgggagtgggatcattgattatgatgccattggtgggaagcttgtcagacaagcatgggagaaaatgtttgcttact  16883800  Previous    Next  AGI:  At5g42210.1    Description:  similar to tetracycline transporter [Arabidopsis thaliana] (TAIR:AT2G16990.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16990.2); similar to unknown [Populus trichocarpa] (GB:ABK95031.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 16883268    to: 16888115    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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